prot_H-elongata_contig105590.463.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig105590.463.1
Unique Nameprot_H-elongata_contig105590.463.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length46
Homology
BLAST of mRNA_H-elongata_contig105590.463.1 vs. uniprot
Match: D7FHP4_ECTSI (AP-1 complex subunit gamma n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHP4_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 1.440e-15
Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 0
Query:    1 MECIKLITSSNYMDKRIGYLGLTLLLTEQEEVLMLVTNSLKV 42
            MECIKLITS NYMDKRIGYLGLTLLLT+QEEVLMLVTNSLKV
Sbjct:   66 MECIKLITSPNYMDKRIGYLGLTLLLTDQEEVLMLVTNSLKV 107          
BLAST of mRNA_H-elongata_contig105590.463.1 vs. uniprot
Match: A0A836CEJ3_9STRA (AP-1 complex subunit gamma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEJ3_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.880e-12
Identity = 36/42 (85.71%), Postives = 38/42 (90.48%), Query Frame = 0
Query:    1 MECIKLITSSNYMDKRIGYLGLTLLLTEQEEVLMLVTNSLKV 42
            MECIKLITS  + DKRIGYLGL LLLTE+EEVLMLVTNSLKV
Sbjct:   66 MECIKLITSPEFTDKRIGYLGLMLLLTEKEEVLMLVTNSLKV 107          
BLAST of mRNA_H-elongata_contig105590.463.1 vs. uniprot
Match: A0A485KG16_9STRA (AP-1 complex subunit gamma n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KG16_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 8.980e-12
Identity = 33/41 (80.49%), Postives = 38/41 (92.68%), Query Frame = 0
Query:    1 MECIKLITSSNYMDKRIGYLGLTLLLTEQEEVLMLVTNSLK 41
            MEC+KLI +SN+ +KRIGYLGL LLLT+QEEVLMLVTNSLK
Sbjct:   66 MECLKLIAASNFSEKRIGYLGLMLLLTDQEEVLMLVTNSLK 106          
BLAST of mRNA_H-elongata_contig105590.463.1 vs. uniprot
Match: A0A6G0WMQ6_9STRA (AP-1 complex subunit gamma n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WMQ6_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 5.850e-11
Identity = 32/41 (78.05%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    1 MECIKLITSSNYMDKRIGYLGLTLLLTEQEEVLMLVTNSLK 41
            MEC+KLI +SN+ +KRIGYLGL LLLT+QEEVL LVTNSLK
Sbjct:   66 MECLKLIAASNFSEKRIGYLGLMLLLTDQEEVLTLVTNSLK 106          
BLAST of mRNA_H-elongata_contig105590.463.1 vs. uniprot
Match: A0A453QUJ0_AEGTS (Adaptin_N domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453QUJ0_AEGTS)

HSP 1 Score: 62.8 bits (151), Expect = 7.150e-11
Identity = 31/41 (75.61%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    1 MECIKLITSSNYMDKRIGYLGLTLLLTEQEEVLMLVTNSLK 41
            MEC+KLI +S + +KRIGYLGLTLLL E++EVLMLVTNSLK
Sbjct:   97 MECLKLIAASGFPEKRIGYLGLTLLLDERQEVLMLVTNSLK 137          
BLAST of mRNA_H-elongata_contig105590.463.1 vs. uniprot
Match: A0A8J5Y9Q8_9ROSI (Adaptin_N domain-containing protein n=2 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5Y9Q8_9ROSI)

HSP 1 Score: 63.2 bits (152), Expect = 7.420e-11
Identity = 32/41 (78.05%), Postives = 36/41 (87.80%), Query Frame = 0
Query:    1 MECIKLITSSNYMDKRIGYLGLTLLLTEQEEVLMLVTNSLK 41
            MEC+KLI SS + DKRIGYLGL LLL E++EVLMLVTNSLK
Sbjct:   79 MECLKLIASSGFPDKRIGYLGLMLLLDERQEVLMLVTNSLK 119          
BLAST of mRNA_H-elongata_contig105590.463.1 vs. uniprot
Match: A0A425C4M0_9STRA (Adaptin_N domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425C4M0_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 1.260e-10
Identity = 31/41 (75.61%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    1 MECIKLITSSNYMDKRIGYLGLTLLLTEQEEVLMLVTNSLK 41
            MEC+KLI ++N+ +KRIGYLGL LLLT+QEEVL LVTNSLK
Sbjct:   66 MECLKLIAANNFSEKRIGYLGLMLLLTDQEEVLTLVTNSLK 106          
BLAST of mRNA_H-elongata_contig105590.463.1 vs. uniprot
Match: A0A397DE85_9STRA (Adaptin_N domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DE85_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 1.350e-10
Identity = 31/41 (75.61%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    1 MECIKLITSSNYMDKRIGYLGLTLLLTEQEEVLMLVTNSLK 41
            MEC+KLI ++N+ +KRIGYLGL LLLT+QEEVL LVTNSLK
Sbjct:   66 MECLKLIAANNFSEKRIGYLGLMLLLTDQEEVLTLVTNSLK 106          
BLAST of mRNA_H-elongata_contig105590.463.1 vs. uniprot
Match: A0A3R6WPV8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6WPV8_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 1.490e-10
Identity = 31/41 (75.61%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    1 MECIKLITSSNYMDKRIGYLGLTLLLTEQEEVLMLVTNSLK 41
            MEC+KLI ++N+ +KRIGYLGL LLLT+QEEVL LVTNSLK
Sbjct:  563 MECLKLIAANNFSEKRIGYLGLMLLLTDQEEVLTLVTNSLK 603          
BLAST of mRNA_H-elongata_contig105590.463.1 vs. uniprot
Match: A0A397EH82_9STRA (GAE domain-containing protein (Fragment) n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EH82_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 1.490e-10
Identity = 31/41 (75.61%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    1 MECIKLITSSNYMDKRIGYLGLTLLLTEQEEVLMLVTNSLK 41
            MEC+KLI ++N+ +KRIGYLGL LLLT+QEEVL LVTNSLK
Sbjct:   68 MECLKLIAANNFSEKRIGYLGLMLLLTDQEEVLTLVTNSLK 108          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig105590.463.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHP4_ECTSI1.440e-1595.24AP-1 complex subunit gamma n=2 Tax=Ectocarpus TaxI... [more]
A0A836CEJ3_9STRA1.880e-1285.71AP-1 complex subunit gamma n=1 Tax=Tribonema minus... [more]
A0A485KG16_9STRA8.980e-1280.49AP-1 complex subunit gamma n=1 Tax=Aphanomyces ste... [more]
A0A6G0WMQ6_9STRA5.850e-1178.05AP-1 complex subunit gamma n=1 Tax=Aphanomyces eut... [more]
A0A453QUJ0_AEGTS7.150e-1175.61Adaptin_N domain-containing protein n=1 Tax=Aegilo... [more]
A0A8J5Y9Q8_9ROSI7.420e-1178.05Adaptin_N domain-containing protein n=2 Tax=Gossyp... [more]
A0A425C4M0_9STRA1.260e-1075.61Adaptin_N domain-containing protein n=1 Tax=Aphano... [more]
A0A397DE85_9STRA1.350e-1075.61Adaptin_N domain-containing protein n=2 Tax=Aphano... [more]
A0A3R6WPV8_9STRA1.490e-1075.61Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A397EH82_9STRA1.490e-1075.61GAE domain-containing protein (Fragment) n=4 Tax=A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..45
e-value: 1.4E-14
score: 55.3
IPR002553Clathrin/coatomer adaptor, adaptin-like, N-terminalPFAMPF01602Adaptin_Ncoord: 1..41
e-value: 2.4E-11
score: 42.9
NoneNo IPR availablePANTHERPTHR22780:SF5ADAPTOR PROTEIN COMPLEX 1, GAMMA SUBUNIT, ISOFORM Dcoord: 1..41
NoneNo IPR availablePANTHERPTHR22780ADAPTIN, ALPHA/GAMMA/EPSILONcoord: 1..41
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 1..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig105590contigH-elongata_contig105590:519..656 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig105590.463.1mRNA_H-elongata_contig105590.463.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig105590 519..680 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig105590.463.1 ID=prot_H-elongata_contig105590.463.1|Name=mRNA_H-elongata_contig105590.463.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=46bp
MECIKLITSSNYMDKRIGYLGLTLLLTEQEEVLMLVTNSLKVTIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR002553Clathrin/coatomer_adapt-like_N
IPR016024ARM-type_fold