mRNA_H-elongata_contig1759.4589.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig1759.4589.1
Unique NamemRNA_H-elongata_contig1759.4589.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig1759.4589.1 vs. uniprot
Match: D7FYU5_ECTSI (MINDY_DUB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYU5_ECTSI)

HSP 1 Score: 400 bits (1027), Expect = 3.650e-132
Identity = 256/484 (52.89%), Postives = 308/484 (63.64%), Query Frame = 1
Query:    1 DLSEISFSELTQLVAGFLLDSNPPSKDLRIDVNQQTQLDSVIKLLPRLQYGLDVNVRFNDIRGFEFTEEMAAFDMSGITLLHGWIVDPEDKQTAAVIDDMSYNKLVEKLLDFRSLNAKT---RDADIQTVELGRAVETREVTNNVDASELKSVHPRRGS--------------PVQAVNSVDVVGMEHQQQAVPGRTEENSQKAQDDISRELPSVEEPSMESARGVEAHESGNAALLSSTRSETPPDE----APSPACPKESVELAIILKEGQAAEEFFKETASQLTYYGLSRLHQEVRDRQLCVFFRNNHFSTLFKFRGKLYLLVTDLGYARESSVVWEKLDQIDGDTEYVDNDFIRSSRCNPANANQLLTGQQNDEDYMLALALQHEDAVSATGTDPPQLAHQGAVVAHQDDEAVALALHHEERVMLEHR--------RAALEGKGVATRGDFRRGSEENREVASTGATGNRRETGSSCSVQ 1365
            DLSEISFSELTQLVAGFLLDSNPP +D RI+VNQQTQLD+VIKLLPRLQYGLDVNVRFN +RGFEFTEEMAAFDMSG+TLLHGWI+DPEDK T +VI+ MSYNKLVEKLL+FRSL  +    R  D   V   + V + +  +N D  E  S +  + +              P+Q   SV  V        V   +E   + A   + R      +  + SA  +   + G+ ++L   R E  P +    A S     ES ++A  L EGQ AEEFF+ETASQLTYYGLS+LHQEVR+RQLCVFFRNNHFST+FK+ GKLYLL+TDLGYARESSVVWEKLDQIDG+TEY D+DF  SSRC+ A+ +      Q+D DYMLALALQ E     T   P   A          DEAVA+ALH EER++LE R          A+ G+G  +R       E +R   +  A GNR E GSSCS+Q
Sbjct:   50 DLSEISFSELTQLVAGFLLDSNPPHEDERINVNQQTQLDTVIKLLPRLQYGLDVNVRFNSVRGFEFTEEMAAFDMSGVTLLHGWILDPEDKHTGSVIEGMSYNKLVEKLLEFRSLTVEASGPRKQDFDNVGARQNVPSDKSESN-DHQEAGSTNFAKTAGEEDAGTQAQLVTKPLQTAQSVGAV-------VVDDASEPLGENAPTPVRRSEEDTGQEGLSSASTI-TRQQGSESILH--REEGLPTDKCARASSVTSETESDKMATALNEGQVAEEFFRETASQLTYYGLSQLHQEVRERQLCVFFRNNHFSTMFKYEGKLYLLITDLGYARESSVVWEKLDQIDGNTEYADSDFGPSSRCSLASGD-----PQSDADYMLALALQQE----GTSGRPIPRAASSEQSGLSGDEAVAMALHQEERILLEQRLGGRNPAQTVAVGGEGAPSR------EERDRGRPADAARGNRSENGSSCSIQ 507          
BLAST of mRNA_H-elongata_contig1759.4589.1 vs. uniprot
Match: W2PLN0_PHYPN (MINDY_DUB domain-containing protein n=29 Tax=Phytophthora TaxID=4783 RepID=W2PLN0_PHYPN)

HSP 1 Score: 208 bits (529), Expect = 1.940e-57
Identity = 135/341 (39.59%), Postives = 190/341 (55.72%), Query Frame = 1
Query:   13 ISFSELTQLVAGFLLDSNPP---SKDLRIDVNQQTQLDSVIKLLPRLQYGLDVNVRFNDIRGFEFTEEMAAFDMSGITLLHGWIVDPEDKQTAAVIDDMSYNKLVEKLLDFRSLNAKTRDADIQTVELGRAVETREVTN-----NVDASELKSVHPRRGSPVQAVNSVDVVGMEHQQQAVPGRTEENSQKAQDDISRELPSVEEPSMESARGV--EAHESGNAALLSSTRSETPPDEAPSPACPKESVELAIILKEGQAAEEFFKETASQLTYYGLSRLHQEVRDRQLCVFFRNNHFSTLFKFRGKLYLLVTDLGYARESSVVWEKLDQIDGDTEYVDNDF 1005
            +S   L QLV   LLD+NPP   + +L+  + Q+  L  V +LLP L  GLDVNVRF+++  FE+T   AAFDM  I L+HGW++D +D +T  V+ + SYN+L+E+L+D+R +            E  + VE    +N     ++D  E+K       SP+ A  +     +     + P     N+  +   +S      + PS ++ + +  E H S   AL ++T                       +L+EG   EEFF  TASQLTYYGL +LH+ +R+RQLCVFFRNNHFSTLFKF G LYLLVTD GY  E +VVWE L++IDGDT Y+D+ F
Sbjct:   55 VSAQNLMQLVHRRLLDTNPPLSNASELQ-RLTQEKTLQDVSELLPSLLVGLDVNVRFHNVTDFEYTVACAAFDMLDIVLVHGWLLDDQDDKTMKVVGNKSYNELIERLVDYRGVLMTEETNKRAASETEKQVEKDASSNIAQREDIDEEEVKPAASSLQSPI-ATQTTGFHNLSIDVNSTPSSP--NTAVSPSSMSSTNSPKKSPSQQTVQTMMKERHMSDADALDTAT----------------------TLLEEGPVLEEFFNSTASQLTYYGLVKLHEGIRERQLCVFFRNNHFSTLFKFEGALYLLVTDAGYLDEPTVVWELLNEIDGDTTYLDSQF 369          
BLAST of mRNA_H-elongata_contig1759.4589.1 vs. uniprot
Match: A0A3F2RDB6_9STRA (MINDY_DUB domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RDB6_9STRA)

HSP 1 Score: 204 bits (520), Expect = 4.090e-57
Identity = 135/346 (39.02%), Postives = 191/346 (55.20%), Query Frame = 1
Query:   13 ISFSELTQLVAGFLLDSNPP---SKDLRIDVNQQTQLDSVIKLLPRLQYGLDVNVRFNDIRGFEFTEEMAAFDMSGITLLHGWIVDPEDKQTAAVIDDMSYNKLVEKLLDFRSLNAKTRDADIQTVELGRAVETREVTNNVDASELKSVHPRRGSPVQAVNSVDVVGMEHQQQAVPGRTEENSQKAQDDISRELPSVEEPSMESARGVEAHESGNAALLSSTRSETPPDEAPSPACPKESVE------------LAIILKEGQAAEEFFKETASQLTYYGLSRLHQEVRDRQLCVFFRNNHFSTLFKFRGKLYLLVTDLGYARESSVVWEKLDQIDGDTEYVDNDF 1005
            +S  +L Q V   LLD+NPP   + +L   + Q+  L  V++LLP +  GLDVNVRF++I  FE+T   AAFDM  I L+HGW++D +D QT  V+ + SYN+L+E+L+D+R +   T +A+             E   +V AS          +P+ A    D      Q++A P          Q  ++     ++  S++      +  SG     +S+ S   P ++PS    +  ++               +L+EG   +EFF  TASQLTYYGL +LH+ +R+RQLCVFFRNNHFSTLFK  G LYLLVTD GY  E SVVWE L++IDGDTEY+D  F
Sbjct:   55 VSAHDLMQAVHKRLLDTNPPLLNASELE-RLTQEKTLKDVVELLPSMLVGLDVNVRFHNITDFEYTVACAAFDMLDIALVHGWLLDQQDNQTMKVVGNKSYNELIERLVDYRGV-LMTEEAN-------------ETAPSVPASSQVETSTEEEAPLDAPKEQD-----EQEEAKP------VSPLQSPLATHTAVLQNLSIDINSAPASSASGAVVSPNSSTSIPSPKKSPSQQTVQTMMKERHISDADAVGAATTLLEEGPILDEFFNSTASQLTYYGLVKLHEGIRERQLCVFFRNNHFSTLFKLEGALYLLVTDAGYLDEPSVVWELLNEIDGDTEYLDAGF 374          
BLAST of mRNA_H-elongata_contig1759.4589.1 vs. uniprot
Match: H3GZU9_PHYRM (MINDY_DUB domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GZU9_PHYRM)

HSP 1 Score: 208 bits (529), Expect = 4.460e-57
Identity = 139/348 (39.94%), Postives = 198/348 (56.90%), Query Frame = 1
Query:   13 ISFSELTQLVAGFLLDSNPP---SKDLRIDVNQQTQLDSVIKLLPRLQYGLDVNVRFNDIRGFEFTEEMAAFDMSGITLLHGWIVDPEDKQTAAVIDDMSYNKLVEKLLDFRSLNAKTRDADIQTVELGR--AVETREVTNNVDASELKSVHPRRGSPVQAVNSVDVVGMEHQQQAVPGRTEENSQKAQDDISRELPSVEEPSMESARGVEAHESGNAALLSSTRSETPPDEAPSPACPKESVE------------LAIILKEGQAAEEFFKETASQLTYYGLSRLHQEVRDRQLCVFFRNNHFSTLFKFRGKLYLLVTDLGYARESSVVWEKLDQIDGDTEYVDNDF 1005
            +S   L +LV   LLD+NPP   + +L+  + Q+  L  V +LLP L  GLDVNVRF++I  FE+T   AAFDM  I L+HGW++D +D  T  V+ + SYN+L+E+L+DFR +        + T E+    A+ET + T+    S++ +                  G E +++ V    +  +      ++ ++   +  S++    V A  SG A   +ST S T P ++PS    +  ++               +L+EG   E+FF  TASQLTYYGL +LH+ VR+RQLCVFFRNNHFSTL KF G LYLLVTD GY  E SVVWE L++IDGDTEY+D+ F
Sbjct:   55 VSAQNLMRLVHRRLLDTNPPLSSASELQ-RLTQEKTLKDVAELLPSLLVGLDVNVRFHNITDFEYTVACAAFDMLDIVLVHGWLLDDQDDSTMKVVGNKSYNELIERLVDFRGV--------LMTEEVNEKAALETEKETDAESLSDIPT------------------GQEGEEEEV----KPAAASLPPPLATQMTGFQNLSID-VNSVAAFPSGVAGSPNSTTSMTSPKKSPSQQTVQTMMKERHISDADALDTATTLLEEGPVLEDFFNSTASQLTYYGLVKLHEGVRERQLCVFFRNNHFSTLLKFEGALYLLVTDAGYLDEPSVVWELLNEIDGDTEYLDSQF 370          
BLAST of mRNA_H-elongata_contig1759.4589.1 vs. uniprot
Match: A0A6A4F9N8_9STRA (MINDY_DUB domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4F9N8_9STRA)

HSP 1 Score: 207 bits (526), Expect = 1.160e-56
Identity = 138/346 (39.88%), Postives = 191/346 (55.20%), Query Frame = 1
Query:   13 ISFSELTQLVAGFLLDSNPP---SKDLRIDVNQQTQLDSVIKLLPRLQYGLDVNVRFNDIRGFEFTEEMAAFDMSGITLLHGWIVDPEDKQTAAVIDDMSYNKLVEKLLDFRSLNAKTRDADIQTVELGRAVETREVTNNVDASELKSVHPRRGSPVQAVNSVDVVGMEHQQQAVPGRTEENSQKAQDDISRELPSVEEPSMESARGVEAHESGNAALLSSTRSETPPDEAPSPACPKESVE------------LAIILKEGQAAEEFFKETASQLTYYGLSRLHQEVRDRQLCVFFRNNHFSTLFKFRGKLYLLVTDLGYARESSVVWEKLDQIDGDTEYVDNDF 1005
            +S  +L QLV   LLD+NPP   + +L+  + Q+  L  V  LLP +  GLDVNVRF++I  FE+T   AAFDM  I L+HGW++D +D  T  V+ + SYN+L+E+L+D+R +       +    E  + V+T   +++    E + V P       AV S+                          ++ ++   +  S+E      A  SG A   +ST S T P ++PS    +  ++               +L+EG   EEFF  TASQLTYYGL +LH+E+R+RQL VFFRNNHFSTLFKF G LYLLVTD GY  E SVVWE L++IDGDTEY+D  F
Sbjct:   55 VSARDLMQLVRRRLLDTNPPVINASELQ-RLTQEKTLQDVAGLLPSMFVGLDVNVRFHNITDFEYTVACAAFDMLDIALVHGWLLDDQDDATMKVVGNKSYNELIERLVDYRGVLMTEEANEEAATETEKQVDTERSSDSTPTEE-EEVKP-------AVASLP-----------------------SPLATQMGGFQNLSIE-INSAPASSSGVAGSPNSTTSMTSPKKSPSQQTVRTMMKERHISDADALDTATTLLEEGPVLEEFFNSTASQLTYYGLVKLHEELRERQLSVFFRNNHFSTLFKFEGALYLLVTDAGYLDEPSVVWELLNEIDGDTEYLDAQF 367          
BLAST of mRNA_H-elongata_contig1759.4589.1 vs. uniprot
Match: A0A2P4YKI4_9STRA (MINDY_DUB domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YKI4_9STRA)

HSP 1 Score: 205 bits (522), Expect = 2.180e-56
Identity = 134/335 (40.00%), Postives = 188/335 (56.12%), Query Frame = 1
Query:   13 ISFSELTQLVAGFLLDSNPPSKDLRIDVNQQTQLDSVIKLLPRLQYGLDVNVRFNDIRGFEFTEEMAAFDMSGITLLHGWIVDPEDKQTAAVIDDMSYNKLVEKLLDFRSLNAKTRDADIQTVELGRAVETREVTNNVDASELKSVHPRRGSPVQAVNSVDVVGMEHQQQAVPGRTEENSQKAQDDISRELPSVEEPSMESARGV--EAHESGNAALLSSTRSETPPDEAPSPACPKESVELAIILKEGQAAEEFFKETASQLTYYGLSRLHQEVRDRQLCVFFRNNHFSTLFKFRGKLYLLVTDLGYARESSVVWEKLDQIDGDTEYVDNDFIR 1011
            +S   L +LV   LLD+NPP       + Q+  L  V++LLP L  GLDVNVRF++I  FE+T   AAFDM  I L+HGW++D +D  T  V+ + SYN+L+E+L+D+R +   T +A  +T E  +A ++  +T   +  E+K       +P   ++ V          ++   +   S    +     +   + PS ++ + +  E H S   AL + T                       +L+EG   EEFF  TASQLTYYGL +LH+ +R+RQLCVFFRNNHFSTLFKF G LYLLVTD GY  E +VVWE L++IDGDTEY+D  F R
Sbjct:   55 VSAHNLMRLVHRRLLDTNPPR------LTQEKTLKDVVELLPSLLVGLDVNVRFHNITDFEYTVACAAFDMLDIVLVHGWLLDEQDDDTMKVVGNKSYNELIERLVDYRGV-LMTEEAH-ETTE--QATDSDTLTGQNEEEEVKP-----STPASLLSPVVTQTTGFHNLSIDVNSAPLSSSTAESPDSMMSPKKSPSQKTVQAMMKERHISDADALDTVT----------------------TLLEEGPVLEEFFNSTASQLTYYGLVKLHEGLRERQLCVFFRNNHFSTLFKFEGALYLLVTDAGYLDEPTVVWELLNEIDGDTEYLDAQFRR 352          
BLAST of mRNA_H-elongata_contig1759.4589.1 vs. uniprot
Match: A0A8K1FIJ4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FIJ4_PYTOL)

HSP 1 Score: 204 bits (519), Expect = 3.370e-56
Identity = 131/335 (39.10%), Postives = 187/335 (55.82%), Query Frame = 1
Query:   13 ISFSELTQLVAGFLLDSNPP--SKDLRIDVNQQTQLDSVIKLLPRLQYGLDVNVRFNDIRGFEFTEEMAAFDMSGITLLHGWIVDPEDKQTAAVIDDMSYNKLVEKLLDFRSLNAKTRDADIQTVELGRAVETREVTNNVDASELKSVHPRRGSPVQAVNSVDVVGMEHQQQAV--PGRTEENSQKAQDDISRELPSVEEPSMESARGVEAHESGNAALLSSTRSETPPDEAPSPACPKESVELAIILKEGQAAEEFFKETASQLTYYGLSRLHQEVRDRQLCVFFRNNHFSTLFKFRGKLYLLVTDLGYARESSVVWEKLDQIDGDTEYVDNDF 1005
            IS  EL Q+V   L+++NPP    D    + QQ  L  V +L+P L  GLDVNVRF+ I  FE+T   A FDM  I L+HGW++D +D +T  V+ + SYN+L+E+++D+R++         +T + G  VE+  V+    + E  S  P     +QA+  +DV  +E     V  P   +  S+K  + + +E    E  + ++A                                      A++L+EG   EEFF  +ASQLTYYGL +LH+++R+RQL VFFRNNHFSTLFK+ G LYLLVTD GY  E +VVWE+L++IDGDTEY+D  F
Sbjct:   62 ISAQELIQVVTKRLVEANPPLPESDELGRLTQQKTLQDVQRLMPSLLVGLDVNVRFHSITDFEYTVACAVFDMLDIALVHGWLLDIQDTKTVDVVQNKSYNELIERVVDYRAVMMT------ETPQEGEPVESNAVSAE-HSEEKPSEAPPPAINIQALR-IDVEKIEETSSVVGSPSPKKSPSKKTVETLKKERQLTESDATDTA--------------------------------------AMLLEEGPVLEEFFASSASQLTYYGLVKLHEDLRERQLSVFFRNNHFSTLFKYDGSLYLLVTDAGYLDEPTVVWERLNEIDGDTEYLDATF 350          
BLAST of mRNA_H-elongata_contig1759.4589.1 vs. uniprot
Match: A0A329SW89_9STRA (MINDY_DUB domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SW89_9STRA)

HSP 1 Score: 203 bits (516), Expect = 1.270e-55
Identity = 133/335 (39.70%), Postives = 186/335 (55.52%), Query Frame = 1
Query:   13 ISFSELTQLVAGFLLDSNPP-SKDLRID-VNQQTQLDSVIKLLPRLQYGLDVNVRFNDIRGFEFTEEMAAFDMSGITLLHGWIVDPEDKQTAAVIDDMSYNKLVEKLLDFRSLNAKTRDADIQTVELGRAVETREVTNNVDASELKSVHPRRGSPVQAVNSVDVVGMEHQQQAVPGRTEENSQKAQDDISRELPSVEEPSMESARGV--EAHESGNAALLSSTRSETPPDEAPSPACPKESVELAIILKEGQAAEEFFKETASQLTYYGLSRLHQEVRDRQLCVFFRNNHFSTLFKFRGKLYLLVTDLGYARESSVVWEKLDQIDGDTEYVDNDF 1005
            +S   L QLV   LLD+NPP S    +  + Q+  L  V +LLP L  GLDVNVRF++I  FE+T   AAFDM  I L+HGW++D +D +T  V+ + SYN+L+E+L+D+R +   T +A+        ++ +     + D  E+K       SP+ A  +     +  +    P     N+  +    S      + PS ++ + +  E H S   AL ++T                       +L+EG   +EFF  TASQLTYYGL +LH+ +R+RQLCVFFRNNHFSTLFKF G LYLLVTD GY  E +VVWE L++IDGDT Y+D  F
Sbjct:   55 VSAQNLMQLVHHRLLDTNPPLSNGSELQRLTQEKTLKDVAELLPSLLVGLDVNVRFHNITDFEYTVACAAFDMLDIVLVHGWLLDDQDDKTMKVVGNKSYNELIERLVDYRGV-LMTEEANETAASETESLSSTVQGQDGDEEEVKPAAASLQSPL-ATQTTGFHNLSIEVNCTPASP--NAAVSPSSTSSTNSPKKSPSQQTVQTMMKERHMSDADALDAAT----------------------TLLEEGPVLDEFFNSTASQLTYYGLVKLHEGLRERQLCVFFRNNHFSTLFKFEGALYLLVTDAGYLDEPTVVWELLNEIDGDTTYLDAQF 363          
BLAST of mRNA_H-elongata_contig1759.4589.1 vs. uniprot
Match: K3WTP8_GLOUD (MINDY_DUB domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTP8_GLOUD)

HSP 1 Score: 200 bits (509), Expect = 1.780e-54
Identity = 137/360 (38.06%), Postives = 199/360 (55.28%), Query Frame = 1
Query:   13 ISFSELTQLVAGFLLDSNPPSKDLRIDVNQQTQ---LDSVIKLLPRLQYGLDVNVRFNDIRGFEFTEEMAAFDMSGITLLHGWIVDPEDKQTAAVIDDMSYNKLVEKLLDFRSLNAKTRDADIQTVELGRAVETREVTNNVDASELKSVHPRRGSPVQAVNSVDVVGMEHQQQAVPGRTEENSQKAQDDISRELPSVEEPSMESARGVEAHESG----NAALLSSTRSETPPDEAPSPACPKESVELAIILKEGQAAEEFFKETASQLTYYGLSRLHQEVRDRQLCVFFRNNHFSTLFKFRGKLYLLVTDLGYARESSVVWEKLDQIDGDTEYVDNDFIRSSRCNPANANQLLTGQQNDE 1071
            IS ++L + V   L+ +NPP    R ++ Q T+   L  VI LLP L  GLDVNVRF+ I  FE+T   A FDM  I L+HGW++D +D  T  V+ + SYN+LVE+L+++RS+     +A+ ++        + E      A+EL  V    G+  Q +  +  V     +  V      + + A D    E+ ++  PS  S+R     +         ++   R  +  D   +            +L+EG   EEFF  +ASQLTYYGL +LH+EVR+RQLCVFFRNNHFSTLFK+ G L+LLVTD GY  E +VVWE+L++IDGDTEY D +F ++   +      +LT Q+ D+
Sbjct:   55 ISATDLMRAVQNRLVAANPPVPG-RSELEQLTREKTLQDVIALLPSLLVGLDVNVRFHKITDFEYTVACAVFDMLDIALVHGWLLDAQDANTMEVVQNKSYNELVERLVEYRSVLMTESEAEEKSERAFAPSSSAE-----GANELSRVDDAAGAIEQEIEPIVPVVHNFNELTV------DIEAAAD---TEMMALSPPSSTSSRSXXXXKKSPSKQTVQVMMKERHISDADAMNT---------ATALLEEGPILEEFFNSSASQLTYYGLMKLHEEVRERQLCVFFRNNHFSTLFKYDGALHLLVTDAGYLDEPTVVWERLNEIDGDTEYFDANF-KTLNVSETKQQSILTQQEQDK 389          
BLAST of mRNA_H-elongata_contig1759.4589.1 vs. uniprot
Match: A0A7S2W2A8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W2A8_9STRA)

HSP 1 Score: 201 bits (511), Expect = 1.910e-54
Identity = 147/378 (38.89%), Postives = 198/378 (52.38%), Query Frame = 1
Query:   13 ISFSELTQLVAGFLLDSNPPSKDLRIDVNQQTQLDSVIKLLPRLQYGLDVNVRF---NDIRGFEFTEEMAAFDMSGITLLHGWIVDPEDKQTAAVIDDMSYNKLVEKLLDFRSLNAKTRDADIQTVELGRAVETREVTNNVDASELKSVHPRRGSPVQAVNSVDVVGME--HQQQAVPGRTEENSQKAQDDISRELPSVEEPS---MESARG-VEAHESGNAALLSSTRSETPPDEAP-----SPACPKESVELAIILKEGQAAEEFFKETASQLTYYGLSRLHQEVRDRQLCVFFRNNHFSTLFKFRGKLYLLVTDLGYARESSVVWEKLDQIDGDTEYVDNDFIRSSRCNPANANQLLTGQQN--DEDYMLALALQ 1098
            IS  +L    A  LLD+N        D N +  +   I LLPRL  GLDVNVRF     + GFE+T E A FD+  +TL HGW+VDP+D+Q A V+D M+YN  VE L+ F++  +             RA   R       AS +       GSP+ A +S      E  H   A P                +L + EEP+     +A G V   + G AA       E   +E P     +P  P +  E +  + +G   + FF+++ASQLTY+GL +LH+ + +RQLCVFFRNNHFST+FK  G+L+LLVTD+GY +ES+VVWEKLD+ DGDTEYV +DF               TG +   D DY+LAL +Q
Sbjct:  118 ISAEQLIHRFAEKLLDANSSHS---ADPNARKLIHDAIALLPRLNQGLDVNVRFCSGEGVLGFEYTAEFALFDLLDVTLAHGWLVDPQDQQAAKVLDGMTYNHAVECLVAFQAYQSP------------RATSLR-------ASSV-------GSPMAAASSPSAAAQEPGHDLDAGPA---------------DLAAAEEPAPPPYSAAVGIVSTPQEGEAASQGPAEEEEVEEERPVIAAVTPQAPAQ--EQSSTVADGMVVDAFFRDSASQLTYHGLLKLHEHLSERQLCVFFRNNHFSTMFKIDGRLFLLVTDVGYLKESTVVWEKLDKTDGDTEYVTSDFGPLPTT---------TGDEMSIDSDYLLALQMQ 440          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1759.4589.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYU5_ECTSI3.650e-13252.89MINDY_DUB domain-containing protein n=1 Tax=Ectoca... [more]
W2PLN0_PHYPN1.940e-5739.59MINDY_DUB domain-containing protein n=29 Tax=Phyto... [more]
A0A3F2RDB6_9STRA4.090e-5739.02MINDY_DUB domain-containing protein n=3 Tax=Phytop... [more]
H3GZU9_PHYRM4.460e-5739.94MINDY_DUB domain-containing protein n=1 Tax=Phytop... [more]
A0A6A4F9N8_9STRA1.160e-5639.88MINDY_DUB domain-containing protein n=4 Tax=Phytop... [more]
A0A2P4YKI4_9STRA2.180e-5640.00MINDY_DUB domain-containing protein n=1 Tax=Phytop... [more]
A0A8K1FIJ4_PYTOL3.370e-5639.10Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A329SW89_9STRA1.270e-5539.70MINDY_DUB domain-containing protein n=2 Tax=Phytop... [more]
K3WTP8_GLOUD1.780e-5438.06MINDY_DUB domain-containing protein n=1 Tax=Globis... [more]
A0A7S2W2A8_9STRA1.910e-5438.89Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1759contigH-elongata_contig1759:2593..5318 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score411.0
Seed ortholog evalue7.3e-112
Seed eggNOG ortholog2880.D7FYU5
EggNOG free text desc.Lys48-specific deubiquitinase activity
EggNOG OGsKOG2427@1,KOG2427@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein of unknown function DUF544
Ec32 orthologEc-19_002520.1
Exons7
Model size1369
Cds size1368
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930019.056277-CDS-H-elongata_contig1759:2592..26521622930019.056277-CDS-H-elongata_contig1759:2592..2652Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1759 2593..2652 -
1691679248.377636-CDS-H-elongata_contig1759:2592..26521691679248.377636-CDS-H-elongata_contig1759:2592..2652Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1759 2593..2652 -
1622930019.0718572-CDS-H-elongata_contig1759:3014..32581622930019.0718572-CDS-H-elongata_contig1759:3014..3258Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1759 3015..3258 -
1691679248.3910787-CDS-H-elongata_contig1759:3014..32581691679248.3910787-CDS-H-elongata_contig1759:3014..3258Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1759 3015..3258 -
1622930019.0910654-CDS-H-elongata_contig1759:3478..35981622930019.0910654-CDS-H-elongata_contig1759:3478..3598Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1759 3479..3598 -
1691679248.40042-CDS-H-elongata_contig1759:3478..35981691679248.40042-CDS-H-elongata_contig1759:3478..3598Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1759 3479..3598 -
1622930019.3231966-CDS-H-elongata_contig1759:3777..38931622930019.3231966-CDS-H-elongata_contig1759:3777..3893Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1759 3778..3893 -
1691679248.4096167-CDS-H-elongata_contig1759:3777..38931691679248.4096167-CDS-H-elongata_contig1759:3777..3893Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1759 3778..3893 -
1622930019.3425682-CDS-H-elongata_contig1759:4012..45611622930019.3425682-CDS-H-elongata_contig1759:4012..4561Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1759 4013..4561 -
1691679248.417703-CDS-H-elongata_contig1759:4012..45611691679248.417703-CDS-H-elongata_contig1759:4012..4561Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1759 4013..4561 -
1622930019.3560534-CDS-H-elongata_contig1759:4712..48801622930019.3560534-CDS-H-elongata_contig1759:4712..4880Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1759 4713..4880 -
1691679248.4260623-CDS-H-elongata_contig1759:4712..48801691679248.4260623-CDS-H-elongata_contig1759:4712..4880Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1759 4713..4880 -
1622930019.3692844-CDS-H-elongata_contig1759:5207..53181622930019.3692844-CDS-H-elongata_contig1759:5207..5318Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1759 5208..5318 -
1691679248.4350095-CDS-H-elongata_contig1759:5207..53181691679248.4350095-CDS-H-elongata_contig1759:5207..5318Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1759 5208..5318 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1759.4589.1prot_H-elongata_contig1759.4589.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig1759 2593..5318 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig1759.4589.1

>prot_H-elongata_contig1759.4589.1 ID=prot_H-elongata_contig1759.4589.1|Name=mRNA_H-elongata_contig1759.4589.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=456bp
DLSEISFSELTQLVAGFLLDSNPPSKDLRIDVNQQTQLDSVIKLLPRLQY
GLDVNVRFNDIRGFEFTEEMAAFDMSGITLLHGWIVDPEDKQTAAVIDDM
SYNKLVEKLLDFRSLNAKTRDADIQTVELGRAVETREVTNNVDASELKSV
HPRRGSPVQAVNSVDVVGMEHQQQAVPGRTEENSQKAQDDISRELPSVEE
PSMESARGVEAHESGNAALLSSTRSETPPDEAPSPACPKESVELAIILKE
GQAAEEFFKETASQLTYYGLSRLHQEVRDRQLCVFFRNNHFSTLFKFRGK
LYLLVTDLGYARESSVVWEKLDQIDGDTEYVDNDFIRSSRCNPANANQLL
TGQQNDEDYMLALALQHEDAVSATGTDPPQLAHQGAVVAHQDDEAVALAL
HHEERVMLEHRRAALEGKGVATRGDFRRGSEENREVASTGATGNRRETGS
SCSVQ*
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mRNA from alignment at H-elongata_contig1759:2593..5318-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig1759.4589.1 ID=mRNA_H-elongata_contig1759.4589.1|Name=mRNA_H-elongata_contig1759.4589.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2726bp|location=Sequence derived from alignment at H-elongata_contig1759:2593..5318- (Himanthalia elongata Himel1 dioecious)
GATTTGTCGGAGATCAGCTTCAGCGAATTGACGCAATTGGTTGCCGGGTT TTTGCTGGACTCGAATCCACCTTCCAAGGACTTGCGAATTGACGTCAATC AGCAGACGCAGGTGATTTTGTCCATGTATTCGTATAATAAATTACTATAG CTGTGAACGTACTGGTCCGTGCATTTATCGGGATCTTTGAGCCGCTGGCG CTTGCTGTGTCTTAGATGCACCCGTAGATCGACTGCAATCAGTAACCGTC GAAGCCCACACATGTAAATGCATAACAACGGAACTGACCTCTACGGGTTC ACGATTGCGATGTGCTCGGTCGACCTAGGTAATGAAAACTCTTCAAGTGA CGATAATCCATACTGTCTCTTTTACTGCTCCATTGTTGAGATTTACGTTT AGAAAATTCGTATTACACTACCCAACTAAACTCATCAGCTAGACTCGGTC ATCAAGCTTCTGCCGCGGCTACAATACGGGCTCGACGTCAACGTGCGCTT CAACGACATTCGAGGCTTTGAATTCACAGAGGAGATGGCAGCATTTGATA TGAGCGGAATAACCCTGCTACATGGGTGGATCGTCGACCCCGAGGACAAA CAAACGGTAAATATATTTTTTACTGATCCATAGCGGTTTTGAATATGCTA AAAAGATCAAATTCAGTTCGTGTGTAGCCAGCAGAGGTATTCAACCTTCT AATCAAAATTTAGCTCACGCTTTACCATTTTTTTCTGTCGCATATGTGAC CCGACAGGCCGCCGTCATCGATGACATGTCGTACAACAAGTTGGTGGAAA AGCTCCTTGACTTTCGATCACTAAACGCCAAGACGAGAGATGCGGATATC CAGACTGTGGAATTGGGTAGAGCGGTAGAGACACGTGAGGTCACAAACAA CGTCGATGCTAGTGAGCTTAAATCTGTTCACCCACGGCGAGGTTCTCCAG TTCAAGCAGTCAATTCAGTCGACGTTGTTGGAATGGAACATCAGCAGCAA GCTGTTCCAGGCCGGACTGAAGAAAATTCTCAAAAGGCTCAGGACGACAT TTCACGAGAGTTACCATCAGTAGAGGAGCCATCGATGGAAAGCGCTAGGG GAGTCGAAGCGCATGAAAGCGGAAACGCCGCGCTTTTGTCATCAACGAGG TCTGAGACGCCTCCTGACGAAGCTCCGAGTCCTGCTTGCCCAAAAGAGTC GGTGGAGTTGGCAATTATTCTCAAGGAAGGGCAAGCAGCCGAAGAATTTT TCAAAGAGACGGCTAGTCAGCTGACGTACTACGGACTGTCACGATTGCAC CAGGAGGTACGTGGTACTAGATGTACTATCTCGTACGGTTTTCCGCTCGA GCTCGATTTTTTTGTCGGTGTAGCGGATGCCAGATATTACGCGCTTCTCC TTTGCCCCGATATGATGGTCGACAGGTTCGAGACCGTCAGTTGTGCGTCT TCTTCCGCAACAACCACTTCTCCACCTTGTTCAAGTTTCGGGGTAAACTC TACCTCTTAGTAACCGATTTGGGATACGCAAGAGAAAGCAGGTGAACTAT TCTCACGGCAATTTCTTGGTCTCATTTTTCACTTGATATATTCCGAATGA ACACACAAATTGGCCTTGTAATTCGATTTTATTTTTAACATGTCTGCAGC GCACGGAGAGAAATGTACGGCCATACTGTTGTTTACGTCCGGCCAAATCA TATACAACTTTTTCTCACAGCGTTGTGTGGGAGAAGCTTGACCAGATCGA TGGTGACACGGAGTACGTGGACAATGATTTCATCCGGAGTTCGCGCTGCA ATCCCGCGAATGCAAACCAGCTTTTAACCGGTCAACAAAAGTGAGTGCCC TGTCGATTTGTGATTGTTTTCTCTTCTGTTAATACTTTACGACCCCTCTT GCTCATTGCGCTGTACGTTCCTTGGAAAATGGCGAATGGCCAAAACGTTG TTGTGATCGATATGAGTATGTTGGTTTGCTACCTTTATATCGAGTCAGCA TTTCGTATCCGTGTTTATTTCACTGTAATTTCGAGCCTCGACTCAAAACG CCAATCGCAGCGATGAAGACTATATGCTTGCGTTAGCGCTTCAGCACGAA GACGCAGTATCAGCAACGGGGACCGACCCTCCACAATTGGCACACCAGGG AGCTGTCGTGGCACACCAGGACGACGAAGCTGTTGCACTGGCATTGCATC ACGAAGAAAGGGTCATGCTTGAGCATAGACGAGCGGCGTTGGAGGGCAAA GGGGTAGCCACCCGCGGGGATTTCAGGCGGGGATCAGAGGAAAATCGCGA AGTTGTTTTGGAAAGAGACAGGTAAGCCATAGGAGTAAATATGACTAACG TTGCTTTCGAAAGAGACAAAAAAGCCTTTAAAATAACTATAATATGACGA AGAGAAAGATAAATTTAATTTTAGGTGCCGGAGTCGCTTTTTTGTAGTCT GAAATGTCAAGGGCGCGTCTGACATTTGTCACCGTGTGAGATGTACAGTT GAACGAGTGTAACGTGATTTGTTTTGAGTGAGGTTGCATTTTATTGCATT TTTGCACCACATTGTCAAAAGCTCCCATAATTTCTGGCTCTTTTCCGATG CTGAATTCCTCGCTAAATGTACGTGGCACGCGGTCAAAATCTGCGATTAG GAGACGACAAACGGAGGCATCAACAGGAGCAACAGGGAACCGCAGAGAAA CCGGCTCTTCTTGCTCTGTGCAGTGA
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Coding sequence (CDS) from alignment at H-elongata_contig1759:2593..5318-

>mRNA_H-elongata_contig1759.4589.1 ID=mRNA_H-elongata_contig1759.4589.1|Name=mRNA_H-elongata_contig1759.4589.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2736bp|location=Sequence derived from alignment at H-elongata_contig1759:2593..5318- (Himanthalia elongata Himel1 dioecious)
GATTTGTCGGAGATCAGCTTCAGCGAATTGACGCAATTGGTTGCCGGGTT
TTTGCTGGACTCGAATCCACCTTCCAAGGACTTGCGAATTGACGTCAATC
AGCAGACGCAGGATTTGTCGGAGATCAGCTTCAGCGAATTGACGCAATTG
GTTGCCGGGTTTTTGCTGGACTCGAATCCACCTTCCAAGGACTTGCGAAT
TGACGTCAATCAGCAGACGCAGCTAGACTCGGTCATCAAGCTTCTGCCGC
GGCTACAATACGGGCTCGACGTCAACGTGCGCTTCAACGACATTCGAGGC
TTTGAATTCACAGAGGAGATGGCAGCATTTGATATGAGCGGAATAACCCT
GCTACATGGGTGGATCGTCGACCCCGAGGACAAACAAACGCTAGACTCGG
TCATCAAGCTTCTGCCGCGGCTACAATACGGGCTCGACGTCAACGTGCGC
TTCAACGACATTCGAGGCTTTGAATTCACAGAGGAGATGGCAGCATTTGA
TATGAGCGGAATAACCCTGCTACATGGGTGGATCGTCGACCCCGAGGACA
AACAAACGGCCGCCGTCATCGATGACATGTCGTACAACAAGTTGGTGGAA
AAGCTCCTTGACTTTCGATCACTAAACGCCAAGACGAGAGATGCGGATAT
CCAGACTGTGGAATTGGGTAGAGCGGTAGAGACACGTGAGGTCACAAACA
ACGTCGATGCTAGTGAGCTTAAATCTGTTCACCCACGGCGAGGTTCTCCA
GTTCAAGCAGTCAATTCAGTCGACGTTGTTGGAATGGAACATCAGCAGCA
AGCTGTTCCAGGCCGGACTGAAGAAAATTCTCAAAAGGCTCAGGACGACA
TTTCACGAGAGTTACCATCAGTAGAGGAGCCATCGATGGAAAGCGCTAGG
GGAGTCGAAGCGCATGAAAGCGGAAACGCCGCGCTTTTGTCATCAACGAG
GTCTGAGACGCCTCCTGACGAAGCTCCGAGTCCTGCTTGCCCAAAAGAGT
CGGTGGAGTTGGCAATTATTCTCAAGGAAGGGCAAGCAGCCGAAGAATTT
TTCAAAGAGACGGCTAGTCAGCTGACGTACTACGGACTGTCACGATTGCA
CCAGGAGGCCGCCGTCATCGATGACATGTCGTACAACAAGTTGGTGGAAA
AGCTCCTTGACTTTCGATCACTAAACGCCAAGACGAGAGATGCGGATATC
CAGACTGTGGAATTGGGTAGAGCGGTAGAGACACGTGAGGTCACAAACAA
CGTCGATGCTAGTGAGCTTAAATCTGTTCACCCACGGCGAGGTTCTCCAG
TTCAAGCAGTCAATTCAGTCGACGTTGTTGGAATGGAACATCAGCAGCAA
GCTGTTCCAGGCCGGACTGAAGAAAATTCTCAAAAGGCTCAGGACGACAT
TTCACGAGAGTTACCATCAGTAGAGGAGCCATCGATGGAAAGCGCTAGGG
GAGTCGAAGCGCATGAAAGCGGAAACGCCGCGCTTTTGTCATCAACGAGG
TCTGAGACGCCTCCTGACGAAGCTCCGAGTCCTGCTTGCCCAAAAGAGTC
GGTGGAGTTGGCAATTATTCTCAAGGAAGGGCAAGCAGCCGAAGAATTTT
TCAAAGAGACGGCTAGTCAGCTGACGTACTACGGACTGTCACGATTGCAC
CAGGAGGTTCGAGACCGTCAGTTGTGCGTCTTCTTCCGCAACAACCACTT
CTCCACCTTGTTCAAGTTTCGGGGTAAACTCTACCTCTTAGTAACCGATT
TGGGATACGCAAGAGAAAGCAGGTTCGAGACCGTCAGTTGTGCGTCTTCT
TCCGCAACAACCACTTCTCCACCTTGTTCAAGTTTCGGGGTAAACTCTAC
CTCTTAGTAACCGATTTGGGATACGCAAGAGAAAGCAGCGTTGTGTGGGA
GAAGCTTGACCAGATCGATGGTGACACGGAGTACGTGGACAATGATTTCA
TCCGGAGTTCGCGCTGCAATCCCGCGAATGCAAACCAGCTTTTAACCGGT
CAACAAAACGTTGTGTGGGAGAAGCTTGACCAGATCGATGGTGACACGGA
GTACGTGGACAATGATTTCATCCGGAGTTCGCGCTGCAATCCCGCGAATG
CAAACCAGCTTTTAACCGGTCAACAAAACGATGAAGACTATATGCTTGCG
TTAGCGCTTCAGCACGAAGACGCAGTATCAGCAACGGGGACCGACCCTCC
ACAATTGGCACACCAGGGAGCTGTCGTGGCACACCAGGACGACGAAGCTG
TTGCACTGGCATTGCATCACGAAGAAAGGGTCATGCTTGAGCATAGACGA
GCGGCGTTGGAGGGCAAAGGGGTAGCCACCCGCGGGGATTTCAGGCGGGG
ATCAGAGGAAAATCGCGAAGTTCGATGAAGACTATATGCTTGCGTTAGCG
CTTCAGCACGAAGACGCAGTATCAGCAACGGGGACCGACCCTCCACAATT
GGCACACCAGGGAGCTGTCGTGGCACACCAGGACGACGAAGCTGTTGCAC
TGGCATTGCATCACGAAGAAAGGGTCATGCTTGAGCATAGACGAGCGGCG
TTGGAGGGCAAAGGGGTAGCCACCCGCGGGGATTTCAGGCGGGGATCAGA
GGAAAATCGCGAAGTTGCATCAACAGGAGCAACAGGGAACCGCAGAGAAA
CCGGCTCTTCTTGCTCTGTGCAGTGAGCATCAACAGGAGCAACAGGGAAC
CGCAGAGAAACCGGCTCTTCTTGCTCTGTGCAGTGA
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