prot_H-elongata_contig105508.455.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig105508.455.1
Unique Name	prot_H-elongata_contig105508.455.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	90

Homology

[Close]

BLAST of mRNA_H-elongata_contig105508.455.1 vs. uniprot
Match: A0A6H5JBT2_9PHAE (PS_pyruv_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBT2_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 6.390e-12
Identity = 27/44 (61.36%), Postives = 37/44 (84.09%), Query Frame = 0

Query:   47 NVSECVLLFGAFCNGNLGDVIQASTMARLITSLADESTCVWHGH 90
            +V EC+LLFGA+ NGN+GDVIQ+STM RL++++A   TC+WH H
Sbjct:   40 DVGECILLFGAYANGNMGDVIQSSTMGRLMSNVAPAGTCIWHAH 83

[Close]

BLAST of mRNA_H-elongata_contig105508.455.1 vs. uniprot
Match: D7FQC2_ECTSI (Putative phosphate/phosphoenolpyruvate translocator protein (ISS) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQC2_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 9.470e-10
Identity = 26/47 (55.32%), Postives = 35/47 (74.47%), Query Frame = 0

Query:   44 IAPNVSECVLLFGAFCNGNLGDVIQASTMARLITSLADESTCVWHGH 90
            ++P+V EC+LLFGAFCNGN+GDVIQ   M  L+ S+A +  C W+ H
Sbjct:  103 VSPDVGECILLFGAFCNGNMGDVIQPMAMEHLLASVAPDQ-CFWYAH 148

[Close]

BLAST of mRNA_H-elongata_contig105508.455.1 vs. uniprot
Match: A0A6H5K4R1_9PHAE (PS_pyruv_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4R1_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 9.710e-8
Identity = 24/44 (54.55%), Postives = 31/44 (70.45%), Query Frame = 0

Query:   47 NVSECVLLFGAFCNGNLGDVIQASTMARLITSLADESTCVWHGH 90
            +VS+C+LL+GAFCNGN+GDVIQ   M  L+  L  E  C W+ H
Sbjct:   73 DVSDCILLYGAFCNGNMGDVIQPQAMENLLAMLVPEQ-CFWYAH 115

[Close]

BLAST of mRNA_H-elongata_contig105508.455.1 vs. uniprot
Match: A0A6H5JM00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM00_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 4.820e-7
Identity = 23/47 (48.94%), Postives = 32/47 (68.09%), Query Frame = 0

Query:   44 IAPNVSECVLLFGAFCNGNLGDVIQASTMARLITSLADESTCVWHGH 90
            +A +V +C+LLFG FCNGN+GDV+Q   M  L+ S+A    C W+ H
Sbjct:   45 LADDVGDCILLFGGFCNGNMGDVVQPIAMQDLLASVAP-GQCFWYAH 90

[Close]

BLAST of mRNA_H-elongata_contig105508.455.1 vs. uniprot
Match: D7FID7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FID7_ECTSI)

HSP 1 Score: 55.1 bits (131), Expect = 8.990e-7
Identity = 22/44 (50.00%), Postives = 31/44 (70.45%), Query Frame = 0

Query:   47 NVSECVLLFGAFCNGNLGDVIQASTMARLITSLADESTCVWHGH 90
            +V +C+LLFG FCNGN+GDV+Q   M  L+ S+A +  C W+ H
Sbjct:   39 DVGDCILLFGGFCNGNMGDVVQPIAMQDLLASVAPDQ-CFWYAH 81

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig105508.455.1 vs. uniprot

BLAST of mRNA_H-elongata_contig105508.455.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5


Match Name	E-value	Identity	Description
A0A6H5JBT2_9PHAE	6.390e-12	61.36	PS_pyruv_trans domain-containing protein n=1 Tax=E...	[more]
D7FQC2_ECTSI	9.470e-10	55.32	Putative phosphate/phosphoenolpyruvate translocato...	[more]
A0A6H5K4R1_9PHAE	9.710e-8	54.55	PS_pyruv_trans domain-containing protein n=2 Tax=E...	[more]
A0A6H5JM00_9PHAE	4.820e-7	48.94	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FID7_ECTSI	8.990e-7	50.00	Uncharacterized protein n=2 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..22
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..6
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 18..22
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 7..17
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 23..90
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..22 score: 0.769
None	No IPR available	TMHMM	TMhelix		coord: 7..29

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig105508	contig	H-elongata_contig105508:521..790 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig105508.455.1	mRNA_H-elongata_contig105508.455.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig105508 455..790 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig105508.455.1 ID=prot_H-elongata_contig105508.455.1|Name=mRNA_H-elongata_contig105508.455.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=90bp
MSAKVKAIFLAAVISLGSIALAGSVQQPFDVPSPTTTLVKQEIIAPNVSE
CVLLFGAFCNGNLGDVIQASTMARLITSLADESTCVWHGH