mRNA_H-elongata_contig17409.4524.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig17409.4524.1 vs. uniprot
Match: D7FX35_ECTSI (SKIP_SNW domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX35_ECTSI) HSP 1 Score: 587 bits (1513), Expect = 4.540e-205 Identity = 361/441 (81.86%), Postives = 378/441 (85.71%), Query Frame = 1
Query: 4 VKHDAIVKQGTNRDKIVYTQLSNIKERRGDAEKLQAPTADEEALTAERTRQAFEKLIGAKVTSATPASIGEQTRKEAEFIKYTPNPSAPGYNSNAKQRVVRMVAAQVDPMDPPKHKHKKVPRAPADDPVPVLHSPPRKVTVQDQQAWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQENTVSPNFATLSESLYIAERKAREETRLRGEMLKQVAMREKDQKEADLRDLAARARMERAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVXXXXXXXXXXXXGDARFGGNRXXXXXXXXXXXXX------RVAAEQRERLRAERXXXXXXEFRMENMKGNMKKQKLDKERDRDISEKIALGMHKGGGGKGGADLYDARLFNQSAGMDXXXXXXXXXXXXXXXXXNRGEAQSVYRPKTDDGDAWGDADQQVR---GTERM 1299
VKHDAIVKQGTNRDKIVY+QLSNIKE+RGD EKLQAPTADEEALTAERTRQAFEKLIGAKVTSATP SIG+QTRKEAEFIKYTPNP+APGYN+NAKQRVVRMVAAQVDPM+PPKHKHKKVPRAPADDPVPVLHSPPRKVTVQDQQAWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQENTVSPNFATLSESLYIAERKAREETRLRGEMLKQVAMREKDQKEADLRDLA+RAR+ERAG+ X XXXX GDAR+G XXXXXXXXXXXXX RVAAEQRERLRAER + R++NM+G MKKQKLDKE+DRDISEKIALGMHKGGGGKGGADLYDARLFNQSAGMDXXXXXXXXXXXXXXXXXNRGEAQSVY+PKTDDGDAWGDADQQ+ GTER
Sbjct: 112 VKHDAIVKQGTNRDKIVYSQLSNIKEKRGDVEKLQAPTADEEALTAERTRQAFEKLIGAKVTSATPGSIGDQTRKEAEFIKYTPNPNAPGYNNNAKQRVVRMVAAQVDPMEPPKHKHKKVPRAPADDPVPVLHSPPRKVTVQDQQAWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQENTVSPNFATLSESLYIAERKAREETRLRGEMLKQVAMREKDQKEADLRDLASRARLERAGIARGGAQDDX----------------------XXXXXGAPRPSGAGDARYGXXXXXXXXXXXXXXXXXMGDEERVAAEQRERLRAERKKDRERDLRIDNMRGGMKKQKLDKEKDRDISEKIALGMHKGGGGKGGADLYDARLFNQSAGMDXXXXXXXXXXXXXXXXXNRGEAQSVYKPKTDDGDAWGDADQQMSQLTGTERF 530
BLAST of mRNA_H-elongata_contig17409.4524.1 vs. uniprot
Match: A0A835ZBA7_9STRA (SKIP/SNW domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBA7_9STRA) HSP 1 Score: 441 bits (1133), Expect = 6.150e-148 Identity = 261/430 (60.70%), Postives = 299/430 (69.53%), Query Frame = 1
Query: 4 VKHDAIVKQGTNRDKIVYTQLSNIKERRGDAEKLQAPTADEEALTAERTRQAFEKLIGAKVTSATPASIGEQ--TRKEAEFIKYTPNPSAPGYNSNAKQRVVRMVAAQVDPMDPPKHKHKKVPRAPADDPVPVLHSPPRKVTVQDQQAWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQENTVSPNFATLSESLYIAERKAREETRLRGEMLKQVAMREKDQKEADLRDLAARARMERAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVXXXXXXXXXXXXGDARFGGNRXXXXXXXXXXXXXRVAAEQRERLRAERXXXXXXEFRMENMKGNMKKQKLDKERDRDISEKIALGMHKG-GGGKGGADLYDARLFNQSAGMDXXXXXXXXXXXXXXXXXNRGEAQSVYRPKTDDGDAWGDADQQVR 1284
VKHDAIVKQGTNRDK+V TQL+N+KE+ GD +KL PT DEE TAERTR A EK++G KVTSATPA + Q KEAEF++YTPNP+APG+N AKQRV+RMV Q DP++PPKHKHKKVPR P DDPVPVLHSPPRKVTV DQ AWKIPPC+SNWKNARGYTIPLDKRLAADGRGL E TVS NFATLSESLYIAERKAREETRLR +M K +A++EK+ KE +LR+LAARARMERAG+ G G XXXXXXXXRVAA+QRERLRAER E R+E+MKGN KK K+ ER+RDISEKIALG KG GGG GG LYD+RLFNQSAGM +RGE +YRP+ DGDA+GDA++Q++
Sbjct: 102 VKHDAIVKQGTNRDKLVQTQLNNVKEKAGDTDKLAVPTEDEEIATAERTRLALEKIVGVKVTSATPAGMISQQLATKEAEFVRYTPNPNAPGFNPAAKQRVIRMVEVQQDPLEPPKHKHKKVPRGPPDDPVPVLHSPPRKVTVADQAAWKIPPCISNWKNARGYTIPLDKRLAADGRGLVEATVSHNFATLSESLYIAERKAREETRLRADMTKALALKEKEAKEGELRELAARARMERAGISAPLAAAA------------------------------------GGGVQGEEGGVQGGXXXXXXXXRVAAQQRERLRAERKKDRERELRLESMKGNFKKGKV--ERERDISEKIALGQLKGTGGGAGGEGLYDSRLFNQSAGMSSGFGDESDYNLYSKPMLDRGEGAGIYRPRKSDGDAFGDAEEQMK 493
BLAST of mRNA_H-elongata_contig17409.4524.1 vs. uniprot
Match: A0A4D9DEX5_9STRA (SKIP_SNW domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DEX5_9STRA) HSP 1 Score: 345 bits (885), Expect = 2.010e-109 Identity = 209/428 (48.83%), Postives = 272/428 (63.55%), Query Frame = 1
Query: 4 VKHDAIVKQGTNRDKIVYTQLSNIKERRGDAEKLQAPTADEEALTAERTRQAFEKLIGAKVTSATPASIGEQT-RKEAEFIKYTPNPSAPGYNSNAKQRVVRMVAAQVDPMDPPKHKHKKVPRAPADDPVPVLHSPPRKVTVQDQQAWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQENTVSPNFATLSESLYIAERKAREETRLRGEMLKQVAMREKDQKEADLRDLAARARMERAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVXXXXXXXXXXXXGDARFG-----------GNRXXXXXXXXXXXXXRVAAEQRERLRAERXXXXXXEFRMENMKGNMKKQKLDKERDRDISEKIALGMHKGGGGKGGADLYDARLFNQSAGMDXXXXXXXXXXXXXXXXXNRGEAQSVYRPKTDDG 1251
V DAIVKQGTNR+KIV+++LS+++ D L PT +EEA A +T+ A E LIG K+ +A P + + +E +++YTPNP+APGYN+NAKQRV+ +V AQVDPM+P KHKHKKVPR P +DPVPVLHSPPRKV+V+DQ+AWKIPPC+SNWKNA+GYTIPLDKRLAADGRGLQE T++P FA L ++LYIAE KARE+ R ++ +++ E++QKE +LR+LAAR+RM RAG+ VXXXXXXXXXX G A G G RVAA QR++LR ER + R +NM+G M+K KLD++ +RDISEKIALGMH G G ++YD+RLFNQ G++ ++G S+YRP+ D G
Sbjct: 98 VNFDAIVKQGTNRNKIVHSKLSDMRGGDADENVLSKPTPEEEAEQAAKTKSALEALIGGKIAAARPVQLAKAPGSEEPTYVRYTPNPNAPGYNTNAKQRVIELVDAQVDPMEPAKHKHKKVPRGPPEDPVPVLHSPPRKVSVEDQEAWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQETTINPKFAALPQALYIAEDKAREQIAARAKIDQKIKKLEREQKEQELRELAARSRMARAGVPVEVGGRREGEE------------------SVXXXXXXXXXXHYGRAWGGAGGVRERVEDVGEERGAEVGRGMTEEERVAAAQRDKLRVERRKELERDMRKDNMRGAMRKGKLDRDGERDISEKIALGMHVGSAKLTGDEVYDSRLFNQGGGVEAGFGGEDEYNVYNKALFDKGAGSSIYRPRGDVG 507
BLAST of mRNA_H-elongata_contig17409.4524.1 vs. uniprot
Match: A0A812VBR9_SYMMI (Bx42 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VBR9_SYMMI) HSP 1 Score: 332 bits (851), Expect = 8.720e-107 Identity = 219/399 (54.89%), Postives = 268/399 (67.17%), Query Frame = 1
Query: 103 LQAPTADEEALTAERTRQAFEKLIGAKVTSATPASIGEQT--RKEAEFIKYTPNPSAPGYNSNAKQRVVRMVAAQVDPMDPPKHKHKKVPRAPADDPVPVLHSPPRKVTVQDQQAWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQENTVSPNFATLSESLYIAERKAREETRLRGEMLKQVAMREKDQKEADLRDLAARARMERAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVXXXXXXXXXXXXGDARFGGNRXXXXXXXXXXXXXRVAAEQRERLRAE----RXXXXXXEFRMENMKGNMKKQKLDKERDRDISEKIALGMHKGGGGKGGADLYDARLFNQSAGMDXXXXXXXXXXXXXXXXXNRGEAQSVYRPKTDDGDAWGDADQQV 1281
+Q P+ +EE TA+ TR+A E L+ K+ A P+SI +E ++I+YTPNP+APGYN+ AKQRV+RMV AQVDPM+PPKHK KKVPR PVPVLHSPPR +TV+DQQ WKIPPCVSNWKNARGYTIPLDKRLAADGRGLQE T++ FA+ SESLYIAERKA E+ R+R ++ K++AMREK+ +E +LR+LA++ARMERAG+ XXXXXXXXXXXXXXX + D G R XXXXXXXXXX V E + E R E R+ENMKG M+K K+D++ +RD+SEKIALGMH+G G G +YDARLFNQS GMD +R EA SVYRPK DD + +GD D Q+
Sbjct: 1 MQLPSTEEEEETADATRRALESLLDGKIKKAKPSSIASTPVDEEEPKYIRYTPNPNAPGYNAAAKQRVIRMVEAQVDPMEPPKHKIKKVPRGGGSPPVPVLHSPPRSLTVKDQQMWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQEVTINNKFASFSESLYIAERKAAEDLRVRNQIRKKMAMREKEDREKELRELASKARMERAGVLGGXXXXXXXXXXXXXXXQRTRPDSDREDEDAGESI---------DGAVGSRRTXXXXXXXXXXTTSVEMSA-EIVTGEGEGGRRKEREREIRLENMKGTMRKNKIDRDMNRDVSEKIALGMHRGSGQLSGEAMYDARLFNQSGGMDSGFGGEDEYNTYSKPLFDRAEAASVYRPKRDDSEMYGDVDSQM 389
BLAST of mRNA_H-elongata_contig17409.4524.1 vs. uniprot
Match: A0A7S0STW4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0STW4_9STRA) HSP 1 Score: 327 bits (837), Expect = 6.770e-105 Identity = 184/408 (45.10%), Postives = 246/408 (60.29%), Query Frame = 1
Query: 58 TQLSNIKERRGDAEKLQAPTADEEALTAERTRQAFEKLIGAKVTSATPASIGEQTRKEAEFIKYTPNPSAPGYNSNAKQRVVRMVAAQVDPMDPPKHKHKKVPRAPADDPVPVLHSPPRKVTVQDQQAWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQENTVSPNFATLSESLYIAERKAREETRLRGEMLKQVAMREKDQKEADLRDLAARARMERAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVXXXXXXXXXXXXGDARFGGNRXXXXXXXXXXXXXRVAAEQRERLRAERXXXXXXEFRMENMKGNMKKQKLDKERDRDISEKIALGMHKGGGGKGGADLYDARLFNQSAGMDXXXXXXXXXXXXXXXXXNRGEAQSVYRPKTDDGDAWGDADQQV 1281
T ++++KE+ G+ + L+ PT DE AE+T+ A E ++ K+ S+ P I E +I+YT NP+APG N ++QRV++MV AQ+DPM+PPKHK KKVPR PA++PVPVLHSPPRK+TV DQQAWKIPPC+SNWKN++G+ IPLDKRLAADGRGLQE T++ FATLSE+LY+AERKA E+ R+R + K++A++EK+ KE +LRD+A +AR+ERAG+ E R +RE +R ER E R+ENMKG ++K KL ++ RDISEKIALG+HKG G G L+D+RLFNQSAG+ +R EA S+YRPK D D +GD D Q+
Sbjct: 10 TTINDLKEKSGNIDSLKLPTDDEALKVAEKTKLALEAILHGKILSSKPLDITRSEDAEPTYIRYTSNPNAPGANGVSQQRVIKMVEAQIDPMEPPKHKIKKVPRGPAEEPVPVLHSPPRKLTVADQQAWKIPPCISNWKNSKGFIIPLDKRLAADGRGLQEVTINNKFATLSEALYVAERKASEDLRIRNTIRKKMAVQEKEDKEKELRDMATKARLERAGVLQGVTNPNNNDSYNKDLESGSDSDEEIPHNETEYE-------------------------------RAQRLERESIRVERRKERERELRLENMKGKLQKSKLGRDEGRDISEKIALGLHKGTGKLTGEALFDSRLFNQSAGLSSGFGPDDEYNTFTKPLFDRAEASSIYRPKKSDTDMYGDVDTQM 386
BLAST of mRNA_H-elongata_contig17409.4524.1 vs. uniprot
Match: F0Y2K4_AURAN (SKIP_SNW domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2K4_AURAN) HSP 1 Score: 317 bits (813), Expect = 1.250e-99 Identity = 205/435 (47.13%), Postives = 263/435 (60.46%), Query Frame = 1
Query: 4 VKHDAIVKQGTNRDKIVYTQLSNIKERRGDAEKLQAPTADEEALTAERTRQAFEKLIGAKVTSATPASIGEQ---TRKEAEFIKYTPNPSAPGYNSNAKQRVVRMVAAQVDPMDPPKHKHKKVPRAPADDPVP----VLHSPPRKVTVQDQQAWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQENTVSPNFATLSESLYIAERKAREETRLRGEMLKQVAMREKDQKEADLRDLAARARMERAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVXXXXXXXXXXXXGDARFGGNRXXXXXXXXXXXXXRVAA--EQRERLRAERXXXXXXEFRMENMKGNMKKQKLDKERDRDISEKIALGMHKGGGGKGGADLYDARLFNQSAGMDXXXXXXXXXXXXXXXXXNRGEAQSVYRPKTDDGDAWGDADQQV 1281
VK+DAIVKQG N+ +IV T L ++KE+ G + L P+A+ EA A+RT+ A ++ K+ SA P + E R++A F++YTPNPSAPGY+++A QR+V++V QVDPM PPKHKH K+PR P PV VLHSPPRKVTV DQQ+WKIPPCVSNWKNARGYTIPLDKRLAADGRGLQE TV+ +FATL+E+LYIAER AR++ R R ++ A+REK+ +EA LRDLAA AR ERA L XXXXXXXXXX D GG VAA +RE++R ER + R++N KG+MK+ D+SEK+ALG+ KG G +D RLFNQS+GMD +R +A ++YRP+ D +GD D Q+
Sbjct: 103 VKYDAIVKQGENKGRIVQTSLEDVKEKEGAEDALALPSAEAEAAAAQRTQAALGAILDGKINSAKPTHVPEACDPNRQKATFVRYTPNPSAPGYSASASQRIVKLVDQQVDPMAPPKHKHTKIPRGPPSPPVXXXXXVLHSPPRKVTVHDQQSWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQEQTVNNDFATLAEALYIAERSARDDVRARAQIRNSNALREKEAQEARLRDLAASARDERAKLADRRGGAAAPRPRDDXXXXXXXXXX--------------------DELLGGGADEDPA---------VAAGRAEREQVRVERKRDRERQMRLDNAKGDMKRSXXXXXXXXDVSEKVALGLLKGTAKLAGEAQFDKRLFNQSSGMDSGFGDDGDYNVYSKPLLDREDATAIYRPREADAGKYGDGDAQL 508
BLAST of mRNA_H-elongata_contig17409.4524.1 vs. uniprot
Match: A0A7S3K114_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K114_9STRA) HSP 1 Score: 317 bits (811), Expect = 2.790e-99 Identity = 202/428 (47.20%), Postives = 277/428 (64.72%), Query Frame = 1
Query: 7 KHDAIVKQGTNRDKIVYTQLSNIKERRGDAEKLQAPTADEEALTAERTRQAFEKLIGAKVTSATPASIGEQT--RKEAEFIKYTPNPSAPGYNSNAKQRVVRMVAAQVDPMDPPKHKHKKVPRAPADDPVPVLHSPPRKVTVQDQQAWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQENTVSPNFATLSESLYIAERKAREETRLRGEMLKQVAMREKDQKEADLRDLAARARMERAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVXXXXXXXXXXXXGDARFGGNRXXXXXXXXXXXXXRVAAEQRERLRAERXXXXXXEFRMENMKGNMKKQKLDKERDRDISEKIALGMHKGGGGKGGADLYDARLFNQSAGMDXXXXXXXXXXXXXXXXXNRGEAQSVYRPKTDDGDAWGDADQQVR 1284
++D++V+QG+NRDK VY LS+IK +G L PT EE TAE+TR A ++ +K+ S+ P + E +++ F++YTPNP+APGY+++ KQR+V++V AQVDPM+PPK+KH KVPR P PVP+LHSPPRK+T +DQ+AWKIPPC+SNWKNARGYTIPLDKRLAADGRGLQE+TV+ NFATL+E+LYIAER AREE R R ++ + A++EK+ +EA LR+LA AR +R+ XXXXXXXXXXXXXXXXXXXX + A +RE R R + R++N KG+ K+ +L++ER+RD+SEK+ALG+ +G G G +D RLFNQ++G+D +R +A ++YRP+ + +GDAD Q+R
Sbjct: 99 RYDSLVRQGSNRDKKVYASLSDIKSSQGSD--LALPTVQEEEKTAEKTRAALGAILTSKINSSKPTHVPEACDGNQKSSFVRYTPNPNAPGYSNDTKQRIVKLVQAQVDPMEPPKYKHTKVPRGPPSPPVPILHSPPRKLTAEDQEAWKIPPCISNWKNARGYTIPLDKRLAADGRGLQEHTVNDNFATLAEALYIAERSAREEVRARAQIRQTNALKEKEAQEARLRELAIAARQDRSQAAQLAATAXXXXXXXXXXXXXXXXXXXXA--------------------------------------QRARVEREEARITRKRERERQMRLDNAKGDTKRSRLERERERDVSEKVALGLLRGNGKLQGETQFDKRLFNQTSGLDQGLTQDDEYNIYTKPLMDRQDAAAIYRPRNTES-KYGDADAQLR 485
BLAST of mRNA_H-elongata_contig17409.4524.1 vs. uniprot
Match: A0A8J2S435_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S435_9STRA) HSP 1 Score: 312 bits (799), Expect = 7.330e-98 Identity = 198/421 (47.03%), Postives = 249/421 (59.14%), Query Frame = 1
Query: 4 VKHDAIVKQGTNRDKIVYTQLSNIKERR-GDAEKLQAPTADEEALTAERTRQAFEKLIGAKVTSATPASIGEQ---TRKEAEFIKYTPNPSAPGYNSNAKQRVVRMVAAQVDPMDPPKHKHKKVPRAPADDPVPVLHSPPRKVTVQDQQAWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQENTVSPNFATLSESLYIAERKAREETRLRGEMLKQVAMREKDQKEADLRDLAARARMERAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVXXXXXXXXXXXXGDARFGGNRXXXXXXXXXXXXXRVAAEQRERLRAERXXXXXXEFRMENMKGNMKKQKLDKERDRDISEKIALGMHKGGGGKGGADLYDARLFNQSAGMDXXXXXXXXXXXXXXXXXNRGEAQSVYRP-KTDDG 1251
V++DAIVKQG N+++IV T L + K R GD E L+ PT +E TA+RT+QA ++ KV S+ P I EQ +++A F++YTPNP+APGY + A QR+V++V QVDPM+PPKHKH KVPR P P PVLHSPPRKVTV DQQ+WKIPPCVSNWKNARGYTIPLDKRLAADGRGLQE TV+ NFATL+E+LYIAER AR+E R R E+ + A+R+K+ +EA LRDLAA+AR ER L G R G +R XXXXXX R++N KG+MK+ +L D+SEK+ALG+ KG G +D RLFNQS+GMD +R +A ++YRP K DDG
Sbjct: 95 VRYDAIVKQGANKNRIVQTSLKDTKGRAVGDDEGLELPTEEEVQETAQRTQQALSVILDGKVNSSKPTHIPEQCDPNQQKATFVRYTPNPNAPGYTATAAQRIVKLVDQQVDPMEPPKHKHTKVPRGPPSPPAPVLHSPPRKVTVHDQQSWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQEQTVNNNFATLAEALYIAERSARDEVRARAEVRQANALRDKEAQEARLRDLAAQAREERNNLQASR----------------------------------------GAPRNDGAAAFFDGDSELLEEEDAGRRERXXXXXXXXXXXXXXMRLDNAKGDMKRSRLXXXXXXDVSEKVALGLLKGSAKLTGEAQFDKRLFNQSSGMDQGFGADDDYNVYSKPLLDREDAAAIYRPRKQDDG 475
BLAST of mRNA_H-elongata_contig17409.4524.1 vs. uniprot
Match: A0A7S3ZXS4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZXS4_9STRA) HSP 1 Score: 312 bits (799), Expect = 7.540e-98 Identity = 198/421 (47.03%), Postives = 249/421 (59.14%), Query Frame = 1
Query: 4 VKHDAIVKQGTNRDKIVYTQLSNIKERR-GDAEKLQAPTADEEALTAERTRQAFEKLIGAKVTSATPASIGEQ---TRKEAEFIKYTPNPSAPGYNSNAKQRVVRMVAAQVDPMDPPKHKHKKVPRAPADDPVPVLHSPPRKVTVQDQQAWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQENTVSPNFATLSESLYIAERKAREETRLRGEMLKQVAMREKDQKEADLRDLAARARMERAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVXXXXXXXXXXXXGDARFGGNRXXXXXXXXXXXXXRVAAEQRERLRAERXXXXXXEFRMENMKGNMKKQKLDKERDRDISEKIALGMHKGGGGKGGADLYDARLFNQSAGMDXXXXXXXXXXXXXXXXXNRGEAQSVYRP-KTDDG 1251
V++DAIVKQG N+++IV T L + K R GD E L+ PT +E TA+RT+QA ++ KV S+ P I EQ +++A F++YTPNP+APGY + A QR+V++V QVDPM+PPKHKH KVPR P P PVLHSPPRKVTV DQQ+WKIPPCVSNWKNARGYTIPLDKRLAADGRGLQE TV+ NFATL+E+LYIAER AR+E R R E+ + A+R+K+ +EA LRDLAA+AR ER L G R G +R XXXXXX R++N KG+MK+ +L D+SEK+ALG+ KG G +D RLFNQS+GMD +R +A ++YRP K DDG
Sbjct: 152 VRYDAIVKQGANKNRIVQTSLKDTKGRAVGDDEGLELPTEEEVQETAQRTQQALSVILDGKVNSSKPTHIPEQCDPNQQKATFVRYTPNPNAPGYTATAAQRIVKLVDQQVDPMEPPKHKHTKVPRGPPSPPAPVLHSPPRKVTVHDQQSWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQEQTVNNNFATLAEALYIAERSARDEVRARAEVRQANALRDKEAQEARLRDLAAQAREERNNLQASR----------------------------------------GAPRNDGAAAFFDGDSELLEEEDAGRRERXXXXXXXXXXXXXXMRLDNAKGDMKRSRLXXXXXXDVSEKVALGLLKGSAKLTGEAQFDKRLFNQSSGMDQGFGADDDYNVYSKPLLDREDAAAIYRPRKQDDG 532
BLAST of mRNA_H-elongata_contig17409.4524.1 vs. uniprot
Match: A0A1E7ETX5_9STRA (SKIP_SNW-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ETX5_9STRA) HSP 1 Score: 299 bits (766), Expect = 1.870e-93 Identity = 200/391 (51.15%), Postives = 255/391 (65.22%), Query Frame = 1
Query: 1 QVKHDAIVKQGTNRDKIVYTQLSNIKERRGDAEKLQAPTADEEALTAERTRQAFEKLIGAKVTSATP---ASIGEQTRKEAE----FIKYTPNPSAPGYNSNAKQRVVRMVAAQVDPMDPPKHKHKKVPRAPADDPVPVLHSPPRKVTVQDQQAWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQENTVSPNFATLSESLYIAERKAREETRLRGEMLKQVAMREKDQKEADLRDLAARARMERAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVXXXXXXXXXXXXGDARFGGNRXXXXXXXXXXXXXRVAAEQRERLRAERXXXXXXEFRMENMKGNMKKQKLDKERDRDISEKIALGMHKGGGGKGGADLYDARLFNQSAGMD 1152
++ +DAIVK GTN DK VY++ +++ AE + PT EE TA RT+ AF+KL+ K+ P A + T K E FIKYTP P APGYN A QRV++MV AQVDPM PPKHKHKKVPR PADDPVP+LH+PP+K++ +++ +W +P C+SNWKN RGYTIPLDKRLAADGRGL+E+T++ NFATLSESLY+AER+AR+E RLR ++ K++ ++EKD++E +LR+LA +AR+ER+G+ GG XXXXXXXXXXX VAA+QRER+ XXXXXX R EN +KK+KL+KERD +SEKIALG+H G GGA D RLFNQSAGMD
Sbjct: 77 EISYDAIVKGGTNSDKKVYSRYEDLRGGEAKAEDIALPTEGEETETANRTQLAFQKLLNNKMALNKPSGSAMVNADTSKNIEEKTQFIKYTPRPDAPGYNPAAAQRVIQMVPAQVDPMMPPKHKHKKVPRGPADDPVPILHAPPQKLSKEERDSWNVPACISNWKNTRGYTIPLDKRLAADGRGLREHTINSNFATLSESLYVAERQARQEVRLRSQVQKKLTIQEKDRREIELRELANQARLERSGV-------------------------------------------------GGXXXXXXXXXXXXX---VAAKQRERMXXXXXXXXXXXLRQENNM-ELKKRKLEKERD--VSEKIALGVHTG---TGGAGEVDNRLFNQSAGMD 409 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17409.4524.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig17409.4524.1 >prot_H-elongata_contig17409.4524.1 ID=prot_H-elongata_contig17409.4524.1|Name=mRNA_H-elongata_contig17409.4524.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=433bp QVKHDAIVKQGTNRDKIVYTQLSNIKERRGDAEKLQAPTADEEALTAERTback to top mRNA from alignment at H-elongata_contig17409:829..6903- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig17409.4524.1 ID=mRNA_H-elongata_contig17409.4524.1|Name=mRNA_H-elongata_contig17409.4524.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6075bp|location=Sequence derived from alignment at H-elongata_contig17409:829..6903- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig17409:829..6903- >mRNA_H-elongata_contig17409.4524.1 ID=mRNA_H-elongata_contig17409.4524.1|Name=mRNA_H-elongata_contig17409.4524.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2598bp|location=Sequence derived from alignment at H-elongata_contig17409:829..6903- (Himanthalia elongata Himel1 dioecious)back to top |