prot_H-elongata_contig174063.4522.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig174063.4522.1
Unique Nameprot_H-elongata_contig174063.4522.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length106
Homology
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BLAST of mRNA_H-elongata_contig174063.4522.1 vs. uniprot
Match: A0A6H5K807_9PHAE (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K807_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 2.120e-16
Identity = 48/105 (45.71%), Postives = 57/105 (54.29%), Query Frame = 0 
Query:    2 QAFSAHHIQRSDATAIVWGSPGERCRKYHEGGTDVTTASVSAGESVDGTVSRDHALSSTRIRVDAEELTRGRRAAMPFVQQCDLIFPLPDIVDQPTGQNHRQQSE 106
            Q FSAH+ QR D TA+VWG+PG R        T  +TA+V                SS    VDAE LTRGRRA  PF+QQCDL+FPLPD   +  G +H    E
Sbjct:    3 QDFSAHNTQRGDVTAVVWGAPGARPA------TGESTATVRP--------------SSAAGAVDAEALTRGRRADTPFIQQCDLVFPLPDQDGESDGHDHGDTQE 87
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig174063.4522.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K807_9PHAE2.120e-1645.71Cyclic nucleotide-binding domain-containing protei... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig174063contigH-elongata_contig174063:531..848 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig174063.4522.1mRNA_H-elongata_contig174063.4522.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig174063 510..848 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig174063.4522.1 ID=prot_H-elongata_contig174063.4522.1|Name=mRNA_H-elongata_contig174063.4522.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=106bp
MQAFSAHHIQRSDATAIVWGSPGERCRKYHEGGTDVTTASVSAGESVDGT
VSRDHALSSTRIRVDAEELTRGRRAAMPFVQQCDLIFPLPDIVDQPTGQN
HRQQSE
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