prot_H-elongata_contig173116.4488.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig173116.4488.1
Unique Nameprot_H-elongata_contig173116.4488.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length69
Homology
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BLAST of mRNA_H-elongata_contig173116.4488.1 vs. uniprot
Match: D8LEM3_ECTSI (ADF-H domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEM3_ECTSI)

HSP 1 Score: 84.3 bits (207), Expect = 3.290e-19
Identity = 48/69 (69.57%), Postives = 54/69 (78.26%), Query Frame = 0 
Query:    1 VIALLGSGSGGLAELCSALDESKVAFCGLRVTGGGGSSGAVPRFHRILFVGEGVGGMKRGRAALQKNAV 69
            VI LLGSG GG++ELCS L +S VAFCG+RV    GS+    RFHRILFVGE VGGMK+GRAAL KNAV
Sbjct:   54 VIKLLGSGIGGVSELCSTLLDSMVAFCGVRVGDDKGSA----RFHRILFVGEEVGGMKKGRAALAKNAV 118
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BLAST of mRNA_H-elongata_contig173116.4488.1 vs. uniprot
Match: M7SDU9_EUTLA (Putative cofilin tropomyosin-type actin-binding protein n=1 Tax=Eutypa lata (strain UCR-EL1) TaxID=1287681 RepID=M7SDU9_EUTLA)

HSP 1 Score: 48.1 bits (113), Expect = 3.960e-5
Identity = 25/68 (36.76%), Postives = 42/68 (61.76%), Query Frame = 0 
Query:    2 IALLGSGSGGLAELCSALDESKVAFCGLRVTGGGGSSGAVPRFHRILFVGEGVGGMKRGRAALQKNAV 69
            +AL G+G+GGLAEL S LD+S+  +  +RV     S     +F  ++++GEG   M++ R +++  AV
Sbjct:   38 LALTGTGTGGLAELASQLDDSQAQYAYVRVEYANDSESTRVKFALVVWIGEGTKVMRKARVSIESGAV 105
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig173116.4488.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEM3_ECTSI3.290e-1969.57ADF-H domain-containing protein n=2 Tax=Ectocarpus... [more]
M7SDU9_EUTLA3.960e-536.76Putative cofilin tropomyosin-type actin-binding pr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029006ADF-H/Gelsolin-like domain superfamilyGENE3D3.40.20.10coord: 2..69
e-value: 5.4E-10
score: 40.9
NoneNo IPR availableSUPERFAMILY55753Actin depolymerizing proteinscoord: 4..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig173116contigH-elongata_contig173116:732..938 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig173116.4488.1mRNA_H-elongata_contig173116.4488.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig173116 732..938 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig173116.4488.1 ID=prot_H-elongata_contig173116.4488.1|Name=mRNA_H-elongata_contig173116.4488.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=69bp
VIALLGSGSGGLAELCSALDESKVAFCGLRVTGGGGSSGAVPRFHRILFV
GEGVGGMKRGRAALQKNAV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029006ADF-H/Gelsolin-like_dom_sf