prot_H-elongata_contig173039.4486.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig173039.4486.1
Unique Nameprot_H-elongata_contig173039.4486.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length101
Homology
BLAST of mRNA_H-elongata_contig173039.4486.1 vs. uniprot
Match: A0A6H5JRS6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRS6_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 2.100e-17
Identity = 43/100 (43.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query:    1 MGDARYYMGCHITRNRKARELKLDQHLYVESMVERFDVKKGSKIPAMSGVPTLSKADEPRNPEEKEEMRKFPYREAVGALTWTATMTRPDIASAVRAVAR 100
            +G+ +++ GC I R+ +A  L++ Q  Y++SMVERFDVK  S+IPA  G     K ++       EE  ++P REA+G++ W +T +RPD++ AVRAVAR
Sbjct:  106 LGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVAR 198          
BLAST of mRNA_H-elongata_contig173039.4486.1 vs. uniprot
Match: A0A6H5KPT0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPT0_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 4.550e-17
Identity = 43/100 (43.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query:    1 MGDARYYMGCHITRNRKARELKLDQHLYVESMVERFDVKKGSKIPAMSGVPTLSKADEPRNPEEKEEMRKFPYREAVGALTWTATMTRPDIASAVRAVAR 100
            +G+ +++ GC I R+ +A  L++ Q  Y++SMVERFDVK  S+IPA  G     K ++       EE  ++P REA+G++ W +T +RPD++ AVRAVAR
Sbjct:   42 LGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVAR 134          
BLAST of mRNA_H-elongata_contig173039.4486.1 vs. uniprot
Match: A0A6H5KTL3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL3_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 2.230e-16
Identity = 43/100 (43.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query:    1 MGDARYYMGCHITRNRKARELKLDQHLYVESMVERFDVKKGSKIPAMSGVPTLSKADEPRNPEEKEEMRKFPYREAVGALTWTATMTRPDIASAVRAVAR 100
            +G+ +++ GC I R+ +A  L++ Q  Y++SMVERFDVK  S+IPA  G     K ++       EE  ++P REA+G++ W +T +RPD++ AVRAVAR
Sbjct:  249 LGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVAR 341          
BLAST of mRNA_H-elongata_contig173039.4486.1 vs. uniprot
Match: A0A6H5K1T2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1T2_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 2.410e-16
Identity = 43/100 (43.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query:    1 MGDARYYMGCHITRNRKARELKLDQHLYVESMVERFDVKKGSKIPAMSGVPTLSKADEPRNPEEKEEMRKFPYREAVGALTWTATMTRPDIASAVRAVAR 100
            +G+ +++ GC I R+ +A  L++ Q  Y++SMVERFDVK  S+IPA  G     K ++       EE  ++P REA+G++ W +T +RPD++ AVRAVAR
Sbjct:  502 LGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVAR 594          
BLAST of mRNA_H-elongata_contig173039.4486.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 2.490e-16
Identity = 43/100 (43.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query:    1 MGDARYYMGCHITRNRKARELKLDQHLYVESMVERFDVKKGSKIPAMSGVPTLSKADEPRNPEEKEEMRKFPYREAVGALTWTATMTRPDIASAVRAVAR 100
            +G+ +++ GC I R+ +A  L++ Q  Y++SMVERFDVK  S+IPA  G     K ++       EE  ++P REA+G++ W +T +RPD++ AVRAVAR
Sbjct:  962 LGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVAR 1054          
BLAST of mRNA_H-elongata_contig173039.4486.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 2.510e-16
Identity = 43/100 (43.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query:    1 MGDARYYMGCHITRNRKARELKLDQHLYVESMVERFDVKKGSKIPAMSGVPTLSKADEPRNPEEKEEMRKFPYREAVGALTWTATMTRPDIASAVRAVAR 100
            +G+ +++ GC I R+ +A  L++ Q  Y++SMVERFDVK  S+IPA  G     K ++       EE  ++P REA+G++ W +T +RPD++ AVRAVAR
Sbjct: 1341 LGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVAR 1433          
BLAST of mRNA_H-elongata_contig173039.4486.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 2.520e-16
Identity = 43/100 (43.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query:    1 MGDARYYMGCHITRNRKARELKLDQHLYVESMVERFDVKKGSKIPAMSGVPTLSKADEPRNPEEKEEMRKFPYREAVGALTWTATMTRPDIASAVRAVAR 100
            +G+ +++ GC I R+ +A  L++ Q  Y++SMVERFDVK  S+IPA  G     K ++       EE  ++P REA+G++ W +T +RPD++ AVRAVAR
Sbjct: 1361 LGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVAR 1453          
BLAST of mRNA_H-elongata_contig173039.4486.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 2.520e-16
Identity = 43/100 (43.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query:    1 MGDARYYMGCHITRNRKARELKLDQHLYVESMVERFDVKKGSKIPAMSGVPTLSKADEPRNPEEKEEMRKFPYREAVGALTWTATMTRPDIASAVRAVAR 100
            +G+ +++ GC I R+ +A  L++ Q  Y++SMVERFDVK  S+IPA  G     K ++       EE  ++P REA+G++ W +T +RPD++ AVRAVAR
Sbjct: 1504 LGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVAR 1596          
BLAST of mRNA_H-elongata_contig173039.4486.1 vs. uniprot
Match: A0A6H5L0C9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0C9_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 3.350e-16
Identity = 46/101 (45.54%), Postives = 63/101 (62.38%), Query Frame = 0
Query:    1 MGDARYYMGCHITRNRKARELKLDQHLYVESMVERFDVKKGSKIPAMSGVPTLSKADEPRNPEEKEEMRKFPYREAVGALTWTATMTRPDIASAVRAVARF 101
            +GD R+Y GC   R+R A  LK+ Q  Y E +   F V+ G +IP   G+  LS+ D+       EE+  +P+RE +G+L W AT TRPDIA+AVRAVAR+
Sbjct:  611 LGDLRWYSGCFYERDRDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFDQ------DEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARY 704          
BLAST of mRNA_H-elongata_contig173039.4486.1 vs. uniprot
Match: A0A6H5K164_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K164_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 4.510e-16
Identity = 43/100 (43.00%), Postives = 65/100 (65.00%), Query Frame = 0
Query:    1 MGDARYYMGCHITRNRKARELKLDQHLYVESMVERFDVKKGSKIPAMSGVPTLSKADEPRNPEEKEEMRKFPYREAVGALTWTATMTRPDIASAVRAVAR 100
            +G+ +++ GC I R+  A  L++ Q  Y++SMVERFDVK  S+IPA  G     K ++       EE  ++P REA+G++ W +T +RPD++ AVRAVAR
Sbjct:  597 LGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVAR 689          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig173039.4486.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRS6_9PHAE2.100e-1743.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KPT0_9PHAE4.550e-1743.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KTL3_9PHAE2.230e-1643.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K1T2_9PHAE2.410e-1643.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSG8_9PHAE2.490e-1643.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE2.510e-1643.00Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE2.520e-1643.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE2.520e-1643.00Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5L0C9_9PHAE3.350e-1645.54Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K164_9PHAE4.510e-1643.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig173039contigH-elongata_contig173039:911..1213 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig173039.4486.1mRNA_H-elongata_contig173039.4486.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig173039 902..1213 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig173039.4486.1 ID=prot_H-elongata_contig173039.4486.1|Name=mRNA_H-elongata_contig173039.4486.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=101bp
MGDARYYMGCHITRNRKARELKLDQHLYVESMVERFDVKKGSKIPAMSGV
PTLSKADEPRNPEEKEEMRKFPYREAVGALTWTATMTRPDIASAVRAVAR
F
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