prot_H-elongata_contig17280.4471.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17280.4471.1
Unique Nameprot_H-elongata_contig17280.4471.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length83
Homology
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BLAST of mRNA_H-elongata_contig17280.4471.1 vs. uniprot
Match: A0A836CG67_9STRA (Protein phosphatase 1 regulatory subunit 14B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG67_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 6.220e-15
Identity = 40/82 (48.78%), Postives = 57/82 (69.51%), Query Frame = 0 
Query:    1 MHTLREVNAVEEAVLDELMALYQVEDEDDLPVDFDIFKVIEKDAIMRRQFLVDILADCPSSKGALEFIEKFLDRVKGLNPDI 82
            M  LRE+  VEEA ++EL+ LY V++ED+L V+FDI +++  D   RR  L D LADCP  K   EF++K+L+R+K LNP +
Sbjct:   33 MSVLREIARVEEAAIEELVELYGVDEEDELAVEFDIHELMAMDPGDRRAALKDKLADCP--KPTDEFVDKYLERIKTLNPKL 112
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BLAST of mRNA_H-elongata_contig17280.4471.1 vs. uniprot
Match: W7UAB5_9STRA (Protein phosphatase 1 regulatory subunit 14d n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UAB5_9STRA)

HSP 1 Score: 48.1 bits (113), Expect = 9.600e-5
Identity = 29/79 (36.71%), Postives = 46/79 (58.23%), Query Frame = 0 
Query:    1 MHTLREVNAVEEAVLDELMALYQVEDEDDLPVDFDIFKVIEKDAIMRRQFLVDILADCPSSKGALEFIEKFLDRVKGLN 79
            M  L +V  VE+  +  L+ LY+V+DED LP++FD+ +VIE     R  FL + + +CPS       I++ L ++  LN
Sbjct:   66 MKQLIKVQQVEQWFMSCLVELYKVDDEDKLPINFDLLEVIEMSKDKRPTFLAEKMTECPSDVQPA--IKELLAKIDELN 142
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17280.4471.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A836CG67_9STRA6.220e-1548.78Protein phosphatase 1 regulatory subunit 14B n=1 T... [more]
W7UAB5_9STRA9.600e-536.71Protein phosphatase 1 regulatory subunit 14d n=2 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036658CPI-17 superfamilyGENE3D1.10.150.220coord: 1..80
e-value: 1.2E-7
score: 33.9
IPR036658CPI-17 superfamilySUPERFAMILY81790Myosin phosphatase inhibitor 17kDa protein, CPI-17coord: 3..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17280contigH-elongata_contig17280:2201..2816 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17280.4471.1mRNA_H-elongata_contig17280.4471.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17280 1931..2872 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17280.4471.1 ID=prot_H-elongata_contig17280.4471.1|Name=mRNA_H-elongata_contig17280.4471.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bp
MHTLREVNAVEEAVLDELMALYQVEDEDDLPVDFDIFKVIEKDAIMRRQF
LVDILADCPSSKGALEFIEKFLDRVKGLNPDI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036658CPI-17_sf