mRNA_H-elongata_contig17228.4452.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig17228.4452.1 vs. uniprot
Match: D8LB69_ECTSI (Cell division control protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB69_ECTSI) HSP 1 Score: 495 bits (1274), Expect = 5.810e-158 Identity = 341/729 (46.78%), Postives = 404/729 (55.42%), Query Frame = 1
Query: 361 EGGKSNRPFELLIRALSDSEVVPAAIVDLKGPYPITTGSTPTPSQGSLVPTSSPPAPLVAAVESILHATLEGELLSKGSVVGVAGFFGFVVTGLKSDQREGEQQRSLSSGGGKAGFTVLVARVHGATELRLSPPTRAGDLGFGIDERTSAIPAAPDASASGCGGARCGRTTSIQGNAKEFARKSASDKPCEVGVGFHGRSLTPKPASTIAAPDPGVSPLISSYLSPSTANWIWSVEQDVGGLRYQVEAVVAAVARSLRRHE---------GAAFTAPASGLLLHGPTGAGKTLLARRVVYRQLPKHSGAPWFFLDCASVFRRDRGDAERDMQEFLVKVAAQSPAVVVLDQVECVSKRRPDCAGITELQVYSVLLEMMDRFRQATPGPAVFFLATCPSSTVLDPSLLQRGRLEIVVRLGALDSAARACALGVHARSMRLHVLHE---------------------LVGSGATCSSSSLKMSSNEAFRFEGGGEASKTKTGGSPASLHPQHAVVTDGLNAGVKEERGMPRTRGEFFRLVAARCQGYLGSDLERLCREAAMRHMTVALEASNRLQALXXXXXXXXXXXXXXXANDSEVVGD------GVRLQDFWAALDTVRPASLVGNSLGSSWEGDGGPEVRGASCVVSASAQLVGCEAAMAELRTFILAPLINPSFLRNLGLRPATGALLHGPPGCGKTSVARALAMEIKGVANFVEVRCSDLVNKVSG 2439
E G S+ L +R L + A++V L GPY ++ ST P + +AAV SIL LEGE+L++GSV VAG F +V + ++++ + S GG V+V RVHGATELRL PPTR+ G+ ++ D +A+ A G NA +K DK V V S TP A ++AP P Y SP WI VE+D GGL V +AAV LR E G TAPASGLL HGPTG GKTLLAR V +HSGAPWFFLDCASVFRRDRG+AE+ +QEFL + SP+VVVLDQVEC+ +RRP+ AGITELQV SVLLE MDRFR+ P VFFLATCP L PSLLQRGRLE V+RLGALDSAARA L +HAR M L VL + + FR E + + A+ P AVV A PRTR EF LVAARC GYLGSDLERLCREAAM H + A A+ + + E G GVRL DFWAAL+ VRPASL G+S G W GD G E RG +S S LVGC+AAMAELR F+L PL NP LR+LGL+ ATGALLHGPPGCGKTSVARALA E++GVANF+EVRCSDLV+KV G
Sbjct: 6 ETGSSSGGTRLSVRELPTDSIALASVVKLSGPYSVS-ASTGRPDLAGRIDDGRAS---LAAVSSILPHALEGEVLAEGSVFSVAGLFALIVVEVCAEEQWRVPAVEVGSTGG-----VVVVRVHGATELRLLPPTRSRR--GGVAGPAESVGPLADGAAAASSSADAGSV-----NAPRSWQKPTDDKG--VAVAEAEPSGTPATAG-LSAPQP--------YRSPGAREWIRLVERDFGGLGDDVATAIAAVGTVLRGSEESSVSETAGGDELTAPASGLLCHGPTGVGKTLLARSVA-----EHSGAPWFFLDCASVFRRDRGEAEQYVQEFLARAWTCSPSVVVLDQVECICRRRPEAAGITELQVLSVLLEAMDRFRRPPSAPRVFFLATCPDPAALGPSLLQRGRLEAVLRLGALDSAARASILSIHARDMVLEVLPSSPPLPSRPXXXXXXXXXXXXXXXXXXXXXXEKTDVVDDESPFRLEKPNREEEAEA----AAATPVSAVV-----ALTPPAVSPPRTRDEFLELVAARCHGYLGSDLERLCREAAMSHFSAAT-AAGAVDVVKGAGRHEAGGDLAAIGGCGEGGGGDKGGAPGVRLLDFWAALNVVRPASLAGHSAGM-WGGDVGKE-RGE---ISVSPPLVGCDAAMAELRAFVLTPLANPDLLRDLGLKGATGALLHGPPGCGKTSVARALAAEVEGVANFLEVRCSDLVDKVVG 687
BLAST of mRNA_H-elongata_contig17228.4452.1 vs. uniprot
Match: A0A497P034_9ARCH (AAA family ATPase n=1 Tax=Candidatus Bathyarchaeota archaeon TaxID=2026714 RepID=A0A497P034_9ARCH) HSP 1 Score: 125 bits (313), Expect = 7.470e-26 Identity = 117/459 (25.49%), Postives = 185/459 (40.31%), Query Frame = 1
Query: 1069 QDVGGLRYQVEAVVAAVARSLRRHE--GAAFTAPASGLLLHGPTGAGKTLLARRVVYRQLPKHSGAPWFFLDCASVFRRDRGDAERDMQEFLVKVAAQSPAVVVLDQVECVSKRRPDCAGITELQVYSVLLEMMDRFRQATPGPAVFFLATCPSSTVLDPSLLQRGRLEIVVRLGALDSAARACALGVHARSMRLHVLHELVGSGATCSSSSLKMSSNEAFRFEGGGEASKTKTGGSPASLHPQHAVVTDGLNAGVKEERGMPRTRGEFFRLVAARCQGYLGSDLERLCREAAMRHMTVALEASNRLQALXXXXXXXXXXXXXXXANDSEVVGDGVRLQDFWAALDTVRPASLVGNSLGSSWEGDGGPEVRGASCVVSASAQLVGCEAAMAELRTFILAPLINPSFLRNLGLRPATGALLHGPPGCGKTSVARALAMEIKGVANFVEVRCSDLVNKVSG 2439
+D+GGL +++ + V LR E P G+LLHGP G GKTLLAR V S A +F ++ + + G++E ++E + SP+++ +D+++ ++ +R + G E +V + LL +MD A G + AT LDP+L + GR + + +G D +AR L +H R GMP + +A GY G+DL LCRE AM+ + L N + S + +R++DF A + P ++ + P VR Q+ G E ELR + P+ NP + +G+RP G LL GPPGCGKT +ARA+A E + ANF+ ++ ++ +K G
Sbjct: 178 EDIGGLHEEIQRIREMVELPLRHPELFQRLGIEPPKGVLLHGPPGCGKTLLARAVA-----NESEANFFSINGPEIMSKFYGESEARLREMFQQAQKNSPSIIFIDELDAIAPKREEVTGEVERRVVAQLLALMDGL--AGRGNLIVIGAT-NRPDALDPALRRPGRFDREIEIGVPDKSARYEILQIHTR---------------------------------------------------------------------GMPLAEDVDLKKLATMTHGYTGADLAALCRETAMKALRRYLPEINLEEERIPP---------------SVLEKMEIRMEDFTNAYKEITPTAMREVYIEV-------PTVRWN--------QIGGLEEVKKELREAVEWPMKNPEVFKRMGIRPPKGILLFGPPGCGKTLLARAVATESE--ANFITIKGPEVFSKWVG 527
BLAST of mRNA_H-elongata_contig17228.4452.1 vs. uniprot
Match: A0A497LV14_9ARCH (AAA family ATPase n=1 Tax=Candidatus Bathyarchaeota archaeon TaxID=2026714 RepID=A0A497LV14_9ARCH) HSP 1 Score: 123 bits (309), Expect = 2.440e-25 Identity = 116/460 (25.22%), Postives = 189/460 (41.09%), Query Frame = 1
Query: 1069 QDVGGLRYQVEAVVAAVARSLRRHE--GAAFTAPASGLLLHGPTGAGKTLLARRVVYRQLPKHSGAPWFFLDCASVFRRDRGDAERDMQEFLVKVAAQSPAVVVLDQVECVSKRRPDCAGITELQVYSVLLEMMDRFRQATPGPAVFFLATCPSSTVLDPSLLQRGRLEIVVRLGALDSAARACALGVHARSMRLHVLHELVGSGATCSSSSLKMSSNEAFRFEGGGEASKTKTGGSPASLHPQHAVVTDGLNAGVKEERGMPRTRGEFFRLVAARCQGYLGSDLERLCREAAMRHMTVALEASNRLQALXXXXXXXXXXXXXXXANDSEVVGD-GVRLQDFWAALDTVRPASLVGNSLGSSWEGDGGPEVRGASCVVSASAQLVGCEAAMAELRTFILAPLINPSFLRNLGLRPATGALLHGPPGCGKTSVARALAMEIKGVANFVEVRCSDLVNKVSG 2439
+D+GGL+ ++ + V L+ E P G+LL+GP G GKTLLA+ V S A ++ ++ + + G++E+ +++ + +P+++ +D+V+ ++ +R + G E +V S LL +MD G V AT LDP+L + GR + + +G D AR L +H R GMP +AA+ G++G+DL LC+EAAM + L + + + EV+ + VR +DF AL V P+++ + P+V+ + G E ELR I PL +P R G+ P G LL GPPGCGKT +A+A+A E + ANF+ +R +L++K G
Sbjct: 206 EDIGGLKEAIQRIREMVELPLKHPELFDRLGIEPPKGVLLYGPPGCGKTLLAKAVA-----NESDANFYAINGPEIMSKFYGESEKKLRDIFEEARKNAPSIIFIDEVDSIAPKREEVTGEVERRVVSQLLTLMDGLEAR--GKVVVIAAT-NRPNALDPALRRPGRFDREIEIGPPDKDARKEILQIHTR---------------------------------------------------------------------GMPLAEDVDLDEIAAKTHGFVGADLAALCKEAAMHALRRILPKIDLNKPVP-----------------KEVLSELKVRKEDFEYALKIVNPSAMREVMIEM-------PKVKWDD--------IGGLEEVKRELREAIELPLKHPEVFRKFGMDPPRGVLLFGPPGCGKTLLAKAVATEAE--ANFISIRGPELLSKWVG 554
BLAST of mRNA_H-elongata_contig17228.4452.1 vs. uniprot
Match: A0A7J2J700_9ARCH (AAA family ATPase (Fragment) n=1 Tax=Candidatus Bathyarchaeota archaeon TaxID=2026714 RepID=A0A7J2J700_9ARCH) HSP 1 Score: 122 bits (305), Expect = 2.690e-25 Identity = 116/462 (25.11%), Postives = 184/462 (39.83%), Query Frame = 1
Query: 1069 QDVGGLRYQVEAVVAAVARSLRRHE--GAAFTAPASGLLLHGPTGAGKTLLARRVVYRQLPKHSGAPWFFLDCASVFRRDRGDAERDMQEFLVKVAAQSPAVVVLDQVECVSKRRPDCAGITELQVYSVLLEMMDRFRQATPGPAVFFLATCPSSTVLDPSLLQRGRLEIVVRLGALDSAARACALGVHARSMRLHVLHELVGSGATCSSSSLKMSSNEAFRFEGGGEASKTKTGGSPASLHPQHAVVTDGLNAGVKEERGMPRTRGEFFRLVAARCQGYLGSDLERLCREAAMRHMTVALEASNRLQALXXXXXXXXXXXXXXXANDSEVVGDGVRLQDFWAALDTVRPASL--VGNSLGS-SWEGDGGPEVRGASCVVSASAQLVGCEAAMAELRTFILAPLINPSFLRNLGLRPATGALLHGPPGCGKTSVARALAMEIKGVANFVEVRCSDLVNKVSG 2439
+D+GGL +++ + V LR E P G+LLHGP G GKTLLAR V S A +F ++ + + G++E ++E + +P+++ +D+++ ++ +R + G E +V + LL +MD A G + AT LDP+L + GR + + +G D AR L +H R GMP + +A GY G+DL LCRE AM+ + L N + S + +R++DF A + P ++ V + S W+ ++ G E ELR + PL NP + G+RP G LL+GPPGCGKT +ARA+A E + ANF + ++++K G
Sbjct: 185 EDIGGLHEEIQRIREMVELPLRHPELFRRLGIDPPKGVLLHGPPGCGKTLLARAVA-----NESEANFFSINGPEIMSKFYGESEARLREIFQQAQQNAPSIIFIDEIDAIAPKREEVTGEVERRVVAQLLALMDGL--AARGNVIVIGAT-NRPDALDPALRRPGRFDREIEIGVPDKQARYEILQIHTR---------------------------------------------------------------------GMPLAGDVDLKKLAEITHGYTGADLAALCRETAMKALRRYLPEINLEEERIPP---------------SVLEKMEIRMEDFLNAYKEITPTAMREVYVEIPSVHWD------------------EIGGLEEVKKELREAVEWPLKNPQVFKRFGIRPPKGILLYGPPGCGKTLLARAVANESE--ANFFSINGPEIMSKFYG 534
BLAST of mRNA_H-elongata_contig17228.4452.1 vs. uniprot
Match: A0A842V2H5_9ARCH (CDC48 family AAA ATPase n=1 Tax=archaeon TaxID=1906665 RepID=A0A842V2H5_9ARCH) HSP 1 Score: 123 bits (309), Expect = 2.920e-25 Identity = 123/472 (26.06%), Postives = 202/472 (42.80%), Query Frame = 1
Query: 1069 QDVGGLRYQVEAVVAAVARSLRRHE--GAAFTAPASGLLLHGPTGAGKTLLARRVVYRQLPKHSGAPWFFLDCASVFRRDRGDAERDMQEFLVKVAAQSPAVVVLDQVECVSKRRPDCAGITELQVYSVLLEMMDRFRQATPGPAVFFLATCPSSTVLDPSLLQRGRLEIVVRLGALDSAARACALGVHARSMRLHVLHELVGSGATCSSSSLKMSSNEAFRFEGGGEASKTKTGGSPASLHPQHAVVTDGLNAGVKEERGMPRTRGE----FFRLVAARCQGYLGSDLERLCREAAMRHMTVALEASNRLQALXXXXXXXXXXXXXXXANDSEVVGDG------VRLQDFWAALDTVRPASL---VGNSLGSSWEGDGGPEVRGASCVVSASAQLVGCEAAMAELRTFILAPLINPSFLRNLGLRPATGALLHGPPGCGKTSVARALAMEIKGVANFVEVRCSDLVNKVSG 2439
+D+GGL +++ V V LR E P G+LLHGP G GKTLLA+ V S A + + + V + G+AE+ ++E + ++P+++ +D+++ ++ +R + G E +V + LL MD + G V AT +++ DP+L + GR + + +G D A R L +H R+M L+ + T + N+ + A K + L+ K +R + R + + ++ G++G+DLE LC+EAAM + L D E V V DF AL VRP+++ + W+ G G E +LR + PL +P + LG++P G LL GPPGCGKT +A+A+A E + ANF+ ++ L +K G
Sbjct: 210 EDIGGLDEEIKKVREMVELPLRNPEIFKQLGIEPPKGVLLHGPPGTGKTLLAKAVA-----NESEAHFRSIVGSEVMSKWVGEAEKKVREIFAEAEKKAPSIIFIDEIDSIAPKREETRGEVERRVVAQLLASMDGLKSR--GNVVVIGATNRHNSI-DPALRRPGRFDREIEIGVPDKAGREKILQIHTRNMPLYNKRMAIKHLDTTNE-------NKELLVKAYNNAKKK-----------DFENIIQELDKNAKLKRLLKRAFNDPKVVNIKQLSRITHGFVGADLEALCKEAAMNVLRRILPEIK--------------------LKDKERVSQDDLKKLIVTNNDFKEALKLVRPSAMREVLVEVPSVKWDDIG------------------GLEDTKKQLREMVEWPLEHPHSFKRLGIKPPKGLLLFGPPGCGKTLLAKAVANESE--ANFISIKGPSLFSKWVG 615
BLAST of mRNA_H-elongata_contig17228.4452.1 vs. uniprot
Match: A0A7C1GGA9_9ARCH (AAA family ATPase n=1 Tax=Candidatus Bathyarchaeota archaeon TaxID=2026714 RepID=A0A7C1GGA9_9ARCH) HSP 1 Score: 122 bits (307), Expect = 4.130e-25 Identity = 116/462 (25.11%), Postives = 184/462 (39.83%), Query Frame = 1
Query: 1069 QDVGGLRYQVEAVVAAVARSLRRHE--GAAFTAPASGLLLHGPTGAGKTLLARRVVYRQLPKHSGAPWFFLDCASVFRRDRGDAERDMQEFLVKVAAQSPAVVVLDQVECVSKRRPDCAGITELQVYSVLLEMMDRFRQATPGPAVFFLATCPSSTVLDPSLLQRGRLEIVVRLGALDSAARACALGVHARSMRLHVLHELVGSGATCSSSSLKMSSNEAFRFEGGGEASKTKTGGSPASLHPQHAVVTDGLNAGVKEERGMPRTRGEFFRLVAARCQGYLGSDLERLCREAAMRHMTVALEASNRLQALXXXXXXXXXXXXXXXANDSEVVGDGVRLQDFWAALDTVRPASL--VGNSLGS-SWEGDGGPEVRGASCVVSASAQLVGCEAAMAELRTFILAPLINPSFLRNLGLRPATGALLHGPPGCGKTSVARALAMEIKGVANFVEVRCSDLVNKVSG 2439
+D+GGL +++ + V LR E P G+LLHGP G GKTLLAR V S A +F ++ + + G++E ++E + +P+++ +D+++ ++ +R + G E +V + LL +MD A G + AT LDP+L + GR + + +G D AR L +H R GMP + +A GY G+D+ LCRE AM+ + L N + S + +R++DF A + P ++ V + + WE G G E ELR + PL NP + G+RP G LL+GPPGCGKT +ARA+A E + ANF+ ++ ++ +K G
Sbjct: 185 EDIGGLHEEIQRIREMVELPLRHPELFQRLGIDPPKGVLLHGPPGCGKTLLARAVA-----NESEANFFSINGPEIMSKFYGESEARLREIFQQAQQNAPSIIFIDEIDAIAPKREEVTGEVERRVVAQLLALMDGL--AARGNVIVIGAT-NRPDALDPALRRPGRFDREIEIGVPDKQARYEILQIHTR---------------------------------------------------------------------GMPLAEDVDLKKLAEMTHGYTGADIAALCRETAMKALRRYLPEINLEEERIPP---------------SVLEKMEIRMEDFLNAYKEITPTAMREVYVEIPTVHWEDIG------------------GLEDVKKELREAVEWPLKNPEIFKRFGIRPPKGILLYGPPGCGKTLLARAVATESE--ANFITIKGPEVFSKWVG 534
BLAST of mRNA_H-elongata_contig17228.4452.1 vs. uniprot
Match: A0A7E4UM96_PANRE (Vesicle-fusing ATPase n=1 Tax=Panagrellus redivivus TaxID=6233 RepID=A0A7E4UM96_PANRE) HSP 1 Score: 122 bits (307), Expect = 5.000e-25 Identity = 106/457 (23.19%), Postives = 192/457 (42.01%), Query Frame = 1
Query: 1072 DVGGLRYQVEAVVAAVARSLRRHE--GAAFTAPASGLLLHGPTGAGKTLLARRVVYRQLPKHSGAPWFFLDCASVFRRDRGDAERDMQEFLVKVAAQSPAVVVLDQVECVSKRRPDCAGITELQVYSVLLEMMDRFRQATPGPAVFFLATCPSSTVLDPSLLQRGRLEIVVRLGALDSAARACALGVHARSMRLHVLHELVGSGATCSSSSLKMSSNEAFRFEGGGEASKTKTGGSPASLHPQHAVVTDGLNAGVKEERGMPRTRGEFFRLVAARCQGYLGSDLERLCREAAMRHMTVALEASNRLQALXXXXXXXXXXXXXXXANDSEVVGD-GVRLQDFWAALDTVRPASL---VGNSLGSSWEGDGGPEVRGASCVVSASAQLVGCEAAMAELRTFILAPLINPSFLRNLGLRPATGALLHGPPGCGKTSVARALAMEIKGVANFVEVRCSDLV 2424
D+GG+R Q+ + V LR + + P G+LL GP G GKT++AR V +G +F ++ + + G++E ++++ + A SPA++ +D+++ ++ +R G E ++ S LL +MD +Q V +A +DP+L + GR + + +G D+A R L +H ++M+L +D +N VA C GY+G+DL LC EAA++ + ++ + + D EV+ V +++F A+ P++L V + SW+ G G ++ EL+ + P+ +P G++P+ G L +GPPGCGKT +A+A+A E + ANF+ ++ +L+
Sbjct: 213 DIGGVRKQMAQIKEMVELPLRHPQLFKSIGIKPPRGILLFGPPGTGKTMIARAVA-----NETGCFFFLINGPEIMSKMSGESESNLRKAFAQCEANSPAILFIDEIDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAH---VIVMAATNRPNSIDPALRRFGRFDREIDIGVPDAAGRLEVLRIHCKNMKL-----------------------------------------------------SDDVN----------------LEQVANECHGYVGADLASLCSEAALQQIREKMDLID----------------LESESIDVEVLNSLAVTMENFRFAMSKNNPSALRETVVETPNVSWDDIG------------------GLQSVKRELQELVQYPVEHPEMFLKFGMQPSRGVLFYGPPGCGKTLLAKAIARECQ--ANFISIKGPELL 556
BLAST of mRNA_H-elongata_contig17228.4452.1 vs. uniprot
Match: L1LFE7_THEEQ (Cell division cycle protein 48, putative n=1 Tax=Theileria equi strain WA TaxID=1537102 RepID=L1LFE7_THEEQ) HSP 1 Score: 120 bits (302), Expect = 2.010e-24 Identity = 117/458 (25.55%), Postives = 193/458 (42.14%), Query Frame = 1
Query: 1072 DVGGLRYQVEAVVAAVARSLRRHEGAAFTA---PASGLLLHGPTGAGKTLLARRVVYRQLPKHSGAPWFFLDCASVFRRDRGDAERDMQEFLVKVAAQSPAVVVLDQVECVSKRRPDCAGITELQVYSVLLEMMDRFRQATPGPAVFFLATCPSSTVLDPSLLQRGRLEIVVRLGALDSAARACALGVHARSMRLHVLHELVGSGATCSSSSLKMSSNEAFRFEGGGEASKTKTGGSPASLHPQHAVVTDGLNAGVKEERGMPRTRGEFFRLVAARCQGYLGSDLERLCREAAMRHMTVALEASNRLQALXXXXXXXXXXXXXXXANDSEVVGD-GVRLQDFWAALDTVRPASL---VGNSLGSSWEGDGGPEVRGASCVVSASAQLVGCEAAMAELRTFILAPLINPSFLRNLGLRPATGALLHGPPGCGKTSVARALAMEIKGVANFVEVRCSDLV 2424
D+GG R Q+ + + LR H G T P G+LL+GP G+GKTL+AR V +GA +F ++ V + G+AE +++ + +P+++ +D+V+ ++ +R G E +V S LL +MD + G V AT +++ DP+L + GR + + +G D A R L +H R+M+ L P+ VK E +AA G++G+DL +LC E+A+ + + A + D+E++ V + F AA++T P+SL V W+ G G E+ + LR IL P+ +P G+ P+ G L +GPPGCGKT +A+A+A E ANF+ ++ +L+
Sbjct: 213 DIGGCRRQMAQIREMIELPLR-HPGLFKTLGVKPPRGVLLYGPPGSGKTLIARAVA-----NETGAFFFLINGPEVMSKMAGEAESNLRRAFAEAEKNAPSIIFIDEVDSIAPKREKTNGEVERRVVSQLLTLMDGLKGR--GQVVVIAATNRQNSI-DPALRRFGRFDKEIDIGVPDDAGRLEILKIHTRNMK----------------------------------------------LAPE-----------VKLEE------------LAANSHGFVGADLAQLCTESALSCIREKMGAID----------------LEDDTIDTEILDSMAVTQEHFNAAMNTCNPSSLRETVVEIPNVKWDDIG------------------GLESVKSALREMILYPIEHPEKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVASECS--ANFISIKGPELL 556
BLAST of mRNA_H-elongata_contig17228.4452.1 vs. uniprot
Match: A0A7C4HI47_9ARCH (AAA family ATPase n=1 Tax=Candidatus Bathyarchaeota archaeon TaxID=2026714 RepID=A0A7C4HI47_9ARCH) HSP 1 Score: 120 bits (300), Expect = 2.900e-24 Identity = 113/463 (24.41%), Postives = 188/463 (40.60%), Query Frame = 1
Query: 1069 QDVGGLRYQVEAVVAAVARSLRRHE--GAAFTAPASGLLLHGPTGAGKTLLARRVVYRQLPKHSGAPWFFLDCASVFRRDRGDAERDMQEFLVKVAAQSPAVVVLDQVECVSKRRPDCAGITELQVYSVLLEMMDRFRQATPGPAVFFLATCPSSTVLDPSLLQRGRLEIVVRLGALDSAARACALGVHARSMRLHVLHELVGSGATCSSSSLKMSSNEAFRFEGGGEASKTKTGGSPASLHPQHAVVTDGLNAGVKEERGMPRTRGEFFRLVAARCQGYLGSDLERLCREAAMRHMTVALEASNRLQALXXXXXXXXXXXXXXXANDSEVVGD-GVRLQDFWAALDTVRPASLVGNSLGSS---WEGDGGPEVRGASCVVSASAQLVGCEAAMAELRTFILAPLINPSFLRNLGLRPATGALLHGPPGCGKTSVARALAMEIKGVANFVEVRCSDLVNKVSG 2439
+D+GGL+ Q++ + V LR E P G+LLHGP G GKTLLA+ V S A + ++ + + G++E ++E + +P+++ +D+++ ++ +R + G E +V + LL +MD + G + AT LDP+L + GR + + +G D R L +H R GMP R +A GY G+DL LCREAAM+ + L + Q +EV+ V+++DF A V P +L ++ W+ ++ G E ELR + P+ NP + +G++P G LL+GPPGCGKT +A+A+A E + ANF+ ++ ++++K G
Sbjct: 179 EDIGGLKEQIQRIREMVELPLRHPEIFQRLGIDPPKGVLLHGPPGCGKTLLAKAVA-----NESDAYFISINGPEIMSKFYGESEARLREIFQQAQQNAPSIIFIDEIDAIAPKREEVTGEVERRVVAQLLALMDGLSER--GNVIVIGAT-NRPNALDPALRRPGRFDREIEIGIPDKQGRYEILLIHTR---------------------------------------------------------------------GMPLAEDVDLRKLAEMTHGYTGADLAALCREAAMKALRRYLPEIDLEQERIP----------------TEVLEKMEVKMEDFLNAFKEVTPTALREVAIEVPTVHWD------------------EVGGLEDVKQELREAVEWPIKNPEMFKRMGIKPPKGILLYGPPGCGKTLLAKAVATESE--ANFIGIKGPEIMSKWVG 528
BLAST of mRNA_H-elongata_contig17228.4452.1 vs. uniprot
Match: F6GWA3_VITVI (Uncharacterized protein n=5 Tax=Vitis TaxID=3603 RepID=F6GWA3_VITVI) HSP 1 Score: 120 bits (300), Expect = 3.230e-24 Identity = 112/462 (24.24%), Postives = 193/462 (41.77%), Query Frame = 1
Query: 1072 DVGGLRYQVEAVVAAVARSLRRHE--GAAFTAPASGLLLHGPTGAGKTLLARRVVYRQLPKHSGAPWFFLDCASVFRRDRGDAERDMQEFLVKVAAQSPAVVVLDQVECVSKRRPDCAGITELQVYSVLLEMMDRFRQATPGPAVFFLATCPSSTVLDPSLLQRGRLEIVVRLGALDSAARACALGVHARSMRLHVLHELVGSGATCSSSSLKMSSNEAFRFEGGGEASKTKTGGSPASLHPQHAVVTDGLNAGVKEERGMPRTRGEFFRLVAARCQGYLGSDLERLCREAAMRHMTVALEASNRLQALXXXXXXXXXXXXXXXANDSEVVGD-GVRLQDFWAALDTVRPASL---VGNSLGSSWEGDGGPEVRGASCVVSASAQLVGCEAAMAELRTFILAPLINPSFLRNLGLRPATGALLHGPPGCGKTSVARALAMEIKGVANFVEVRCSDLVNKVSG 2439
DVGG R Q+ + V LR + + P G+LL+GP G+GKTL+A+ V +GA +F ++ + + G++E ++++ + +P++V +D+++ ++ +R G E ++ S LL +MD + V + +DP+L + GR + + +G D R L +H ++M+L S++A + E G ++ D +A GY+G+DL LC EAA++ + ++ + A D+EV+ V + F AL T P++L V SWE G G E EL+ + P+ +P G+ P+ G L +GPPGCGKT +A+A+A E + ANF+ V+ +L+ K G
Sbjct: 164 DVGGFRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIAKAVA-----NETGAFFFCINGPEIMSKLAGESEGNLRKAFEEAEKNAPSIVFIDEIDSIAPKREKTHGQVEKRIVSQLLTLMDGLKSRAH---VIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKL---------------------SDDAIQKEKG--------------------IIVD-------------------LERIAKDSHGYVGADLAALCTEAALQSIREKMDVID----------------LEDEAIDAEVLNSMAVTDKHFKTALGTTNPSALRETVVEVPNVSWEDIG------------------GLEYVKRELQETVQYPVEHPEKFEQFGMSPSRGVLFYGPPGCGKTLLAKAIANECQ--ANFISVKGPELLTKWFG 521 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17228.4452.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig17228.4452.1 >prot_H-elongata_contig17228.4452.1 ID=prot_H-elongata_contig17228.4452.1|Name=mRNA_H-elongata_contig17228.4452.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=813bp PVSSGCALLWLDPTSSAASLILEGKVQVSLSEKHGATAGNSDVGPKLWIPback to top mRNA from alignment at H-elongata_contig17228:671..4519- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig17228.4452.1 ID=mRNA_H-elongata_contig17228.4452.1|Name=mRNA_H-elongata_contig17228.4452.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3849bp|location=Sequence derived from alignment at H-elongata_contig17228:671..4519- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig17228:671..4519- >mRNA_H-elongata_contig17228.4452.1 ID=mRNA_H-elongata_contig17228.4452.1|Name=mRNA_H-elongata_contig17228.4452.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4878bp|location=Sequence derived from alignment at H-elongata_contig17228:671..4519- (Himanthalia elongata Himel1 dioecious)back to top |