prot_H-elongata_contig171284.4398.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig171284.4398.1
Unique Nameprot_H-elongata_contig171284.4398.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length105
Homology
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BLAST of mRNA_H-elongata_contig171284.4398.1 vs. uniprot
Match: D7G9C9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9C9_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 5.280e-25
Identity = 51/104 (49.04%), Postives = 66/104 (63.46%), Query Frame = 0 
Query:    1 GPRNGATSLLASARKEWPSQNELERGFLASARKSESKGHGKNYWTSDKNFRNEMMAFNTEFQAQAGLPAVWMARPTDMNKSGRRDLVNATQRTGGYNAMVERLG 104
            GP+ G + L+  A K WPS+  LE G  AS  K   +     YWT+  NF  E++AFNT +Q + GLPAVWM +  DM  +GRRD+VNA QR GGY+  +ERLG
Sbjct:  187 GPQGGGSELIKIATKGWPSREALETGNRASESKHMLEKCASGYWTTGSNFVREVLAFNTNYQLEEGLPAVWMVKLIDMINNGRRDIVNAIQRAGGYDPAIERLG 290
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig171284.4398.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G9C9_ECTSI5.280e-2549.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig171284contigH-elongata_contig171284:267..1020 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig171284.4398.1mRNA_H-elongata_contig171284.4398.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig171284 267..1020 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig171284.4398.1 ID=prot_H-elongata_contig171284.4398.1|Name=mRNA_H-elongata_contig171284.4398.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=105bp
GPRNGATSLLASARKEWPSQNELERGFLASARKSESKGHGKNYWTSDKNF
RNEMMAFNTEFQAQAGLPAVWMARPTDMNKSGRRDLVNATQRTGGYNAMV
ERLG*
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