mRNA_H-elongata_contig16951.4311.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig16951.4311.1 vs. uniprot
Match: D7G474_ECTSI (Agmatine deiminase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G474_ECTSI) HSP 1 Score: 535 bits (1377), Expect = 1.200e-180 Identity = 253/355 (71.27%), Postives = 292/355 (82.25%), Query Frame = 1
Query: 1 RTWMLWPTRPDVWSRSAGPGQKAFAAVANAIAQFELVTVGVPPGSESSAQVLLDPARVTVVVIEQDDAWVRDTGPLFVVR-EHSVSDNGHREGRHVRGVDWSFNAWGGLAQGCYSSWAKDEKVAGTILGLVDAERYRANMILEGGSVHVDGEATLVTTEECLLNANRNPTLSKGDIEKYLRQYLGVEKVIWLGQGVVGDVDTNGHVDNLVAFVRPGEVVLHWTDDASDPQHAVSSDALRRLESSTDARGRRLKVHKCPIPGPLYTSHEDVASLEETPGSSERVSGERLAASYVNFYLANGAVILPGFGVPEDEVAVRIFQGLFPDREVVQVNTRDIVLGGGNIHCITQQQPLGVT 1062
RTWMLWP RPD W SA P Q AFAAVA AIA+FE VTVGVP SAQ LLD + + VIEQDDAW+RDTGP FVV S S R R+VRGVDWSFNAWGG GC+S+W KD+ +A T+LGLV A+RY+ANM+LEGGSVHVDGE T++TTEECLLN NRNPT +K +IEK+LR YLGV+ V+WLGQGV GDVDT+GHVDNLVAFV PGEVVLHWTD+ DPQHAVS DALRRLE+ DARGR+LKVHKCP+PGPL+T+ EDV+SLE T GS ER G+RLAASYVNFYLANGAVILPG+GVPEDE AVR+F+ ++P+REV+QV+TR + LGGGNIHCITQQQP+G T
Sbjct: 31 RTWMLWPVRPDTWKESARPAQLAFAAVAKAIARFEPVTVGVPSSQLQSAQPLLDATGIGIAVIEQDDAWIRDTGPTFVVGGTRSESSERQRGMRNVRGVDWSFNAWGGEFGGCFSNWDKDDAIASTVLGLVGADRYKANMVLEGGSVHVDGEGTVITTEECLLNPNRNPTFTKSEIEKHLRDYLGVKLVLWLGQGVTGDVDTDGHVDNLVAFVHPGEVVLHWTDNTEDPQHAVSLDALRRLEAFIDARGRQLKVHKCPLPGPLHTTEEDVSSLEHTLGSRERAQGDRLAASYVNFYLANGAVILPGYGVPEDEAAVRLFKAIYPEREVIQVDTRAVALGGGNIHCITQQQPVGAT 385
BLAST of mRNA_H-elongata_contig16951.4311.1 vs. uniprot
Match: A0A2P6V231_9CHLO (Agmatine deiminase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V231_9CHLO) HSP 1 Score: 407 bits (1045), Expect = 8.990e-131 Identity = 200/353 (56.66%), Postives = 248/353 (70.25%), Query Frame = 1
Query: 1 RTWMLWPTRPDVWSRSAGPGQKAFAAVANAIAQFELVTVGVPPGSESSAQVLLDPARVTVVVIEQDDAWVRDTGPLFVVREHSVSDNGHREGRHVRGVDWSFNAWGGLAQGCYSSWAKDEKVAGTILGLVDAERYRANMILEGGSVHVDGEATLVTTEECLLNANRNPTLSKGDIEKYLRQYLGVEKVIWLGQGVVGDVDTNGHVDNLVAFVRPGEVVLHWTDDASDPQHAVSSDALRRLESSTDARGRRLKVHKCPIPGPLYTSHEDVASLEETPGSSERVSGERLAASYVNFYLANGAVILPGFGVPEDEVAVRIFQGL---FPDREVVQVNTRDIVLGGGNIHCITQQQP 1050
RTWM WP RPD W + P Q+AFAAVA AIAQFE VTV ++A+ +L PA V VV I QDDAW+RDTGP FV+RE + R + G+DW FNAWGG G Y++W +D+ VA T+L A R+ +++EGGS+H DGE TL+TTEECLLN NRNP+LS+ +IE +LR+ LGV+KVIWL +G+ GD DTNGH+DN F RPG V+L WTDDASDPQH +S +ALR L +TDA+GR+LKV K P P PL+ S ++ ++E GS RV+G+RLAASY+NFYL NG +++P FG E R Q L FP R VV V TRDIVLGGGNIHCITQQQP
Sbjct: 39 RTWMGWPERPDNWRQGGAPAQRAFAAVAAAIAQFEPVTVAANEAQVANARAML-PASVEVVCIPQDDAWLRDTGPTFVLREEASGQ------RSLGGIDWVFNAWGGGEGGMYATWERDQAVAATVLQAASARRFACPIVMEGGSLHADGEGTLLTTEECLLNPNRNPSLSRDEIEGWLRRMLGVQKVIWLPRGLCGDDDTNGHIDNFACFARPGTVLLAWTDDASDPQHEISVEALRVLSQATDAKGRQLKVVKVPCPPPLHYSQDEAEGVKEVHGSKARVAGDRLAASYINFYLCNGGLVMPAFGGAAAEADKRAQQALAEAFPGRRVVAVPTRDIVLGGGNIHCITQQQP 384
BLAST of mRNA_H-elongata_contig16951.4311.1 vs. uniprot
Match: A0A553GVT0_9PSED (Agmatine deiminase n=1 Tax=Pseudomonas mangiferae TaxID=2593654 RepID=A0A553GVT0_9PSED) HSP 1 Score: 401 bits (1030), Expect = 5.510e-129 Identity = 201/351 (57.26%), Postives = 235/351 (66.95%), Query Frame = 1
Query: 1 RTWMLWPTRPDVWSRSAGPGQKAFAAVANAIAQFELVTVGVPPGSESSAQVLLDPARVTVVVIEQDDAWVRDTGPLFVVREHSVSDNGHREGRHVRGVDWSFNAWGGLAQGCYSSWAKDEKVAGTILGLVDAERYRAN-MILEGGSVHVDGEATLVTTEECLLNANRNPTLSKGDIEKYLRQYLGVEKVIWLGQGVVGDVDTNGHVDNLVAFVRPGEVVLHWTDDASDPQHAVSSDALRRLESSTDARGRRLKVHKCPIPGPLYTSHEDVASLEETPGSSERVSGERLAASYVNFYLANGAVILPGFGVPEDEVAVRIFQGLFPDREVVQVNTRDIVLGGGNIHCITQQQP 1050
+TWM+WP RPD W P Q AF AVA AIA+FE VTVGV G ++A LD + VV I DDAWVRDTGP FV+ E VRGVDW+FNAWGGL G Y W +D++VAG ILGL RYR +LEGGS+HVDGE TL+TTEECLLN NRNP L++ DIE LR +L V+ VIWL G+ D +T+GHVDN FVRPGEV+L WTDD DP HA AL+ LE + DARGR L VHK PIPGPL+ S + A ++ GS R + RLA SYVNF + NG VI P F P+DE A + Q LFPDREVV V R+I+LGGGNIHCITQQQP
Sbjct: 24 QTWMVWPERPDNWRLGGKPAQAAFTAVARAIARFEPVTVGVSAGQYANASARLDDPNIRVVEISNDDAWVRDTGPTFVIDERG----------EVRGVDWTFNAWGGLLGGLYFPWQRDDQVAGKILGLERCARYRTEGFVLEGGSIHVDGEGTLITTEECLLNRNRNPHLARADIEAVLRDHLAVDTVIWLPDGLYND-ETDGHVDNFCCFVRPGEVLLAWTDDPQDPNHARCQAALKVLEQARDARGRALTVHKMPIPGPLHASEAECAGVDAAVGSQAREAAVRLAGSYVNFLIVNGGVIAPSFDDPQDEAARTLLQRLFPDREVVMVPGREILLGGGNIHCITQQQP 363
BLAST of mRNA_H-elongata_contig16951.4311.1 vs. uniprot
Match: A0A2E0UXB7_9CHLR (Putative agmatine deiminase n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A2E0UXB7_9CHLR) HSP 1 Score: 396 bits (1017), Expect = 3.980e-127 Identity = 190/348 (54.60%), Postives = 246/348 (70.69%), Query Frame = 1
Query: 4 TWMLWPTRPDVWSRSAGPGQKAFAAVANAIAQFELVTVGVPPGSESSAQVLLDPARVTVVVIEQDDAWVRDTGPLFVVREHSVSDNGHREGRHVRGVDWSFNAWGGLAQGCYSSWAKDEKVAGTILGLVDAERYRANMILEGGSVHVDGEATLVTTEECLLNANRNPTLSKGDIEKYLRQYLGVEKVIWLGQGVVGDVDTNGHVDNLVAFVRPGEVVLHWTDDASDPQHAVSSDALRRLESSTDARGRRLKVHKCPIPGPLYTSHEDVASLEETPGSSERVSGERLAASYVNFYLANGAVILPGFGVPEDEVAVRIFQGLFPDREVVQVNTRDIVLGGGNIHCITQQQ 1047
TWM+WP R D W A P QKAF VA AIA+FE VT+ V G +A+ LL P++V VV + +D+W+RD GP F+ NG E VRG+DW FNAWGGL G Y W D+ VA ++ + + +RY+A ++LEGGS+HVDGE TL+TTEECLLNANRNP LSK +IE Y+R+YL +EK+IWLGQGV D +TNGHVDN+ F+RPG V L WT+D DPQ+ +S DA RRL + DA+GR+L++HK PGP+Y + E+ ++ G+ R +G+R+A SY+NFY+ANG +ILP F P DE A+R + LFPDREVV V R+I+LGGGNIHCITQQQ
Sbjct: 26 TWMIWPERTDNWRLGAKPAQKAFVDVATAIAKFEPVTMCVSLGQFLNARHLL-PSQVRVVEMSSNDSWMRDCGPTFI-------KNGEGE---VRGIDWDFNAWGGLESGLYFPWDLDDLVAQKVINIENLDRYKAPLVLEGGSIHVDGEGTLLTTEECLLNANRNPALSKEEIENYMREYLNIEKIIWLGQGVYND-ETNGHVDNICCFIRPGVVALTWTEDKDDPQYEISQDAYRRLSEAIDAKGRKLEIHKIIQPGPIYLTQEESEGVDAVDGTLPREAGDRMAGSYINFYMANGGIILPVFDDPNDEEAIRKVRSLFPDREVVPVKAREILLGGGNIHCITQQQ 361
BLAST of mRNA_H-elongata_contig16951.4311.1 vs. uniprot
Match: D8M6V7_BLAHO (Uncharacterized protein n=3 Tax=Blastocystis TaxID=12967 RepID=D8M6V7_BLAHO) HSP 1 Score: 396 bits (1018), Expect = 6.840e-127 Identity = 196/353 (55.52%), Postives = 243/353 (68.84%), Query Frame = 1
Query: 1 RTWMLWPTRPDVWSRSAGPGQKAFAAVANAIAQFELVTVGVPPGSESSAQVLLDPARVTVVVIEQDDAWVRDTGPLFVVREHSVSDNGHREGRHVRGVDWSFNAWGGLAQGCYSSWAKDEKVAGTILGLVDAERYRANMILEGGSVHVDGEATLVTTEECLLNANRNPTLSKGDIEKYLRQYLGVEKVIWLGQGVVGDVDTNGHVDNLVAFVRPGEVVLHWTDDASDPQHAVSSDALRRLESSTDARGRRLKVHKCPIPGPLYTSHEDVASLEETPGSSERVSGERLAASYVNFYLANGAVILPGFGVPEDEVAVRIFQGLFPDREVVQVNTRDIVLGGGNIHCITQQQPLGV 1059
+TWM +P RPD+W +A P QK FA VANAIA+FE VTV P + A+ LLD V VV + +D+W RDTG +FV E V VRG +W FN+WGGL GCY W D VAG + + Y+ NMILEGGS+ DGE TL+TTEECLLN NRNP+++K IE L++ LGVEKVIWL G+ GDVDTNGHVDN F RPGEV+L WTDD DPQ+ +S A + LE++TDA+GR LK+HK IP + + E+ A L + G+ ER +RL ASYVNFY ANGA+I P FGV EDE+A ++FQ +FP+REVV V TR+++LGGGNIHCITQQQP GV
Sbjct: 46 QTWMGFPQRPDIWRENAAPAQKVFANVANAIARFEPVTVCAPKELYTVARSLLD-KNVRVVEMSMNDSWFRDTGAIFVKNEEGV----------VRGTNWLFNSWGGLNGGCYDYWEDDLLVAGKMCNIERVPYYKYNMILEGGSISFDGEGTLLTTEECLLNPNRNPSMTKEQIEAELKRGLGVEKVIWLPNGLFGDVDTNGHVDNFCVFARPGEVLLSWTDDEKDPQYPISQHAYKLLEAATDAKGRHLKIHKLHIPSDIIRTPEEFAGLTQEEGTIEREENQRLPASYVNFYFANGAIISPCFGVKEDEMARKVFQEVFPEREVVMVPTREVILGGGNIHCITQQQPKGV 387
BLAST of mRNA_H-elongata_contig16951.4311.1 vs. uniprot
Match: A0A1I4PGT0_9PSED (Agmatine deiminase n=1 Tax=Pseudomonas yangmingensis TaxID=1720063 RepID=A0A1I4PGT0_9PSED) HSP 1 Score: 394 bits (1012), Expect = 2.360e-126 Identity = 201/351 (57.26%), Postives = 235/351 (66.95%), Query Frame = 1
Query: 1 RTWMLWPTRPDVWSRSAGPGQKAFAAVANAIAQFELVTVGVPPGSESSAQVLLDPARVTVVVIEQDDAWVRDTGPLFVVREHSVSDNGHREGRHVRGVDWSFNAWGGLAQGCYSSWAKDEKVAGTILGLVDAERYRAN-MILEGGSVHVDGEATLVTTEECLLNANRNPTLSKGDIEKYLRQYLGVEKVIWLGQGVVGDVDTNGHVDNLVAFVRPGEVVLHWTDDASDPQHAVSSDALRRLESSTDARGRRLKVHKCPIPGPLYTSHEDVASLEETPGSSERVSGERLAASYVNFYLANGAVILPGFGVPEDEVAVRIFQGLFPDREVVQVNTRDIVLGGGNIHCITQQQP 1050
+TWMLWP RPD W A P Q AFA VA AIA FE VTVGV +A LD + VV + DDAWVRDTGP FVV NG +RGVDW+FNAWGG G Y W +D++VAG IL L RYR +LEGG+ HVDGE TL+TTEECLLNANRNP L + +IE L YLG++KVIWL QG+ D +T+GHVDN FVRPGEV+L WTDD DP HA ALR L++S DARGR L+VH+ PIPGPLY S E+ A ++ PGS R RLAASYVNF + NG +I P F P D+ A + + LFPDR VV V R+I+LGGGNIHCITQQQP
Sbjct: 24 QTWMLWPERPDNWRLGAKPAQAAFAEVARAIAGFEPVTVGVSAAQYGNASSQLDHPGIRVVELSSDDAWVRDTGPTFVV-------NGQGG---LRGVDWTFNAWGGFNGGLYWPWQRDDQVAGKILSLERCPRYRTEGFVLEGGAFHVDGEGTLITTEECLLNANRNPQLLREEIELKLADYLGIDKVIWLPQGLYND-ETDGHVDNFCCFVRPGEVLLAWTDDPDDPNHARCQTALRVLQASRDARGRELQVHRMPIPGPLYASAEECAGVDRVPGSQARDPSVRLAASYVNFLVVNGGIIAPAFDDPHDQAARELLEQLFPDRRVVMVPGREILLGGGNIHCITQQQP 363
BLAST of mRNA_H-elongata_contig16951.4311.1 vs. uniprot
Match: A0A0P6Y7T8_9CHLR (Putative agmatine deiminase n=1 Tax=Levilinea saccharolytica TaxID=229921 RepID=A0A0P6Y7T8_9CHLR) HSP 1 Score: 392 bits (1007), Expect = 1.260e-125 Identity = 188/349 (53.87%), Postives = 238/349 (68.19%), Query Frame = 1
Query: 4 TWMLWPTRPDVWSRSAGPGQKAFAAVANAIAQFELVTVGVPPGSESSAQVLLDPARVTVVVIEQDDAWVRDTGPLFVVREHSVSDNGHREGRHVRGVDWSFNAWGGLAQGCYSSWAKDEKVAGTILGLVDAERYRANMILEGGSVHVDGEATLVTTEECLLNANRNPTLSKGDIEKYLRQYLGVEKVIWLGQGVVGDVDTNGHVDNLVAFVRPGEVVLHWTDDASDPQHAVSSDALRRLESSTDARGRRLKVHKCPIPGPLYTSHEDVASLEETPGSSERVSGERLAASYVNFYLANGAVILPGFGVPEDEVAVRIFQGLFPDREVVQVNTRDIVLGGGNIHCITQQQP 1050
TWMLWP RPD W A P QK FA VA AIAQFE +T+GV +A+ LL P V VV + DD+W+RD GP FV + + VR VDW FNAWGGL G Y W D KVA + L +RY+A ++LEGGS+HVDG+ TL+TTEECLLN NRNP LSKG+IE YL+ YL ++K+IWLGQG+ D +TNGHVDN+ FVRPG + L WTDD DPQ+ +S+DA RL +TDARGR L+VHK +P P++ + E+ ++ G+ R G+RLA SYVN+Y NGAVI+P F P D +A++ Q L+PDR +V + R+I+LGGGNIHCITQQQP
Sbjct: 26 TWMLWPERPDNWRLGAKPAQKTFAQVAAAIAQFEPLTIGVSNAQYLNARSLLPPT-VRVVELSYDDSWMRDCGPTFVKNDQGL----------VRVVDWEFNAWGGLTGGLYFPWDNDNKVARKVAELERVDRYKAPLVLEGGSIHVDGQGTLLTTEECLLNPNRNPELSKGEIESYLQDYLNIQKIIWLGQGIFND-ETNGHVDNIACFVRPGVIALAWTDDKQDPQYEISADAYERLRRTTDARGRALEVHKIHVPNPIFITEEESQGVDSAEGTLPRNPGDRLAGSYVNYYCCNGAVIVPTFNDPHDALALQELQVLYPDRTIVPIPAREILLGGGNIHCITQQQP 362
BLAST of mRNA_H-elongata_contig16951.4311.1 vs. uniprot
Match: A0A2P6U3E8_CHLSO (Agmatine deiminase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U3E8_CHLSO) HSP 1 Score: 392 bits (1007), Expect = 3.050e-125 Identity = 192/355 (54.08%), Postives = 244/355 (68.73%), Query Frame = 1
Query: 1 RTWMLWPTRPDVWSRSAGPGQKAFAAVANAIAQFELVTVGVPPGSESSAQVLLDPARVTVVVIEQDDAWVRDTGPLFVVREHSVSDNGHREGRHVRGVDWSFNAWGGLAQGCYSSWAKDEKVAGTILGLVDAERYRANMILEGGSVHVDGEATLVTTEECLLNANRNPTLSKGDIEKYLRQYLGVEKVIWLGQGVVGDVDTNGHVDNLVAFVRPGEVVLHWTDDASDPQHAVSSDALRRLESSTDARGRRLKVHKCPIPGPLYTSHEDVASLEETPGSSERVSGERLAASYVNFYLANGAVILPGFG---VPEDEVAVRIFQGLFPDREVVQVNTRDIVLGGGNIHCITQQQPLG 1056
RTWM WP RPD W +A Q+AF VA AI+QFE VT+ ++A+ L P ++VV I QDDAW RDTGP FVV+E GR V GVDW FNAWGGL G Y+SW +D VAGTIL + +R+ +++EGGS+HVDG+ TL+TTEECLLN NRNP LS+ IE +LR+ LGV+K+IWL +G+VGD DTNGH+DN F PG V+L WTDD SDPQHA+S +A + L +TDA+GR+L+V K P+P PL+ + A ++ GS RV+GER+AASY N Y+ NG V++P FG D AV + Q FP R+VV V +R+I+LGGGNIHCITQQQP G
Sbjct: 41 RTWMGWPQRPDNWRDNASHAQRAFVDVATAISQFEPVTICANQEQVAAAREALPP-HISVVCIPQDDAWFRDTGPTFVVKEEPGG------GRAVAGVDWQFNAWGGLEGGLYASWERDSGVAGTILQMEGTQRFPCPIVMEGGSIHVDGQGTLLTTEECLLNHNRNPELSREQIEGWLRRMLGVQKIIWLPKGLVGDDDTNGHIDNFACFAAPGVVLLAWTDDESDPQHAISKEAFQILSGTTDAQGRKLQVVKLPLPPPLHIIEHEAAGVQVLDGSKPRVAGERMAASYANCYVCNGGVVVPAFGGEAAEADARAVEVLQAAFPGRKVVSVQSREILLGGGNIHCITQQQPKG 388
BLAST of mRNA_H-elongata_contig16951.4311.1 vs. uniprot
Match: A0A7C2JJA2_9CHLR (Putative agmatine deiminase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C2JJA2_9CHLR) HSP 1 Score: 391 bits (1004), Expect = 3.400e-125 Identity = 195/350 (55.71%), Postives = 239/350 (68.29%), Query Frame = 1
Query: 7 WMLWPTRPDVWSRSAGPGQKAFAAVANAIAQFELVTVGVPPGSESSAQVLLDPARVTVVVIEQDDAWVRDTGPLFVVREHSVSDNGHREGRHVRGVDWSFNAWGGLAQGCYSSWAKDEKVAGTILGLVDAERYRANMILEGGSVHVDGEATLVTTEECLLNANRNPTLSKGDIEKYLRQYLGVEKVIWLGQGVVGDVDTNGHVDNLVAFVRPGEVVLHWTDDASDPQHAVSSDALRRLESSTDARGRRLKVHKCPIPGPLYTSHEDVASLEETPGSSERVSGERLAASYVNFYLANGAVILPGFGVPEDEVAVRIFQGLFPDREVVQVNTRDIVLGGGNIHCITQQQPLG 1056
WMLWP RPD W A P Q+AFA VA AI++FE VT+GV +A+ LL P V VV + +D+W+RDTGP FVV + V VRGVDW FN WGGL G Y W +DE VA +L L +RY +++LEGGS+HVDGE TL+TTEECLLN NRNP LSKG+IE LR+YLGVEKVIWL +GV GD T+GHVDNL FVRPG V L WT+D SDPQ S A +R+ +TDARGRRL+VH+ PGPLY + E+ ++ GS +R GERL ASY+NFY+ANG V++P FG P D+ A+ + LFP V+ V R+I+LGGG IHCI QQQP G
Sbjct: 26 WMLWPERPDNWRVGAKPAQRAFAEVAAAISRFERVTMGVSASQFLNARRLLPP-HVRVVELSNNDSWMRDTGPTFVVDDRGV----------VRGVDWEFNCWGGLDAGHYFPWDQDELVARKVLDLEGVDRYAPDLVLEGGSIHVDGEGTLLTTEECLLNPNRNPHLSKGEIEDRLREYLGVEKVIWLARGVHGD-GTSGHVDNLCCFVRPGVVALTWTEDGSDPQWERSMQAYQRVMEATDARGRRLEVHRIHQPGPLYRTREEAQGVDVVKGSQQRQEGERLPASYINFYIANGGVVMPQFGDPYDQAALEAIRALFPSDTVISVPAREILLGGGGIHCIVQQQPQG 363
BLAST of mRNA_H-elongata_contig16951.4311.1 vs. uniprot
Match: A0A1H9TYI9_9GAMM (Agmatine deiminase n=6 Tax=Pseudomonadaceae TaxID=135621 RepID=A0A1H9TYI9_9GAMM) HSP 1 Score: 389 bits (998), Expect = 2.830e-124 Identity = 194/351 (55.27%), Postives = 236/351 (67.24%), Query Frame = 1
Query: 1 RTWMLWPTRPDVWSRSAGPGQKAFAAVANAIAQFELVTVGVPPGSESSAQVLLDPARVTVVVIEQDDAWVRDTGPLFVVREHSVSDNGHREGRHVRGVDWSFNAWGGLAQGCYSSWAKDEKVAGTILGLVDAERYRAN-MILEGGSVHVDGEATLVTTEECLLNANRNPTLSKGDIEKYLRQYLGVEKVIWLGQGVVGDVDTNGHVDNLVAFVRPGEVVLHWTDDASDPQHAVSSDALRRLESSTDARGRRLKVHKCPIPGPLYTSHEDVASLEETPGSSERVSGERLAASYVNFYLANGAVILPGFGVPEDEVAVRIFQGLFPDREVVQVNTRDIVLGGGNIHCITQQQP 1050
+TWMLWP RPD W A P Q AFA VA AIA FE VTVGV ++A + LD + VV I DDAWVRDTGP FV NG VRGVDW FNAWGG G Y W +D++VA ILGL RYR + +LEGG++HVDGE TL+TTEECLLNANRNP L + ++E+ L YLG+E+VIWL +G+ D +T+GHVDN FVRPGEV+L WTDD +DP H ALR LESS DA+GR L VH+ PIPGP++ + + A +++ PGS R RLA SY+NF + NG V+ P F P+D A I + LFP+R VV V R+I+LGGGNIHCITQQQP
Sbjct: 24 QTWMLWPERPDNWRLGAKPAQAAFAEVARAIASFEPVTVGVSAAQYANASLQLDHPAIRVVEISSDDAWVRDTGPTFVT-------NGQGG---VRGVDWVFNAWGGFDGGLYWPWNRDDQVADKILGLERCPRYRTDGFVLEGGAIHVDGEGTLITTEECLLNANRNPHLQRHEVERMLMDYLGIERVIWLPEGLYND-ETDGHVDNFCCFVRPGEVLLAWTDDPTDPNHVRCQAALRVLESSRDAQGRELTVHRMPIPGPIHATTAECAGVDQVPGSQPRSPSVRLAGSYINFLIVNGGVVAPAFDDPQDAQAQAILESLFPERRVVMVPGREILLGGGNIHCITQQQP 363 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16951.4311.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig16951.4311.1 >prot_H-elongata_contig16951.4311.1 ID=prot_H-elongata_contig16951.4311.1|Name=mRNA_H-elongata_contig16951.4311.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=357bp MLWPTRPDVWSRSAGPGQKAFAAVANAIAQFELVTVGVPPGSESSAQVLLback to top mRNA from alignment at H-elongata_contig16951:977..6996- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig16951.4311.1 ID=mRNA_H-elongata_contig16951.4311.1|Name=mRNA_H-elongata_contig16951.4311.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6020bp|location=Sequence derived from alignment at H-elongata_contig16951:977..6996- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig16951:977..6996- >mRNA_H-elongata_contig16951.4311.1 ID=mRNA_H-elongata_contig16951.4311.1|Name=mRNA_H-elongata_contig16951.4311.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2142bp|location=Sequence derived from alignment at H-elongata_contig16951:977..6996- (Himanthalia elongata Himel1 dioecious)back to top |