mRNA_H-elongata_contig1692.4299.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig1692.4299.1 vs. uniprot
Match: D8LPQ2_ECTSI (ARFRP1, ARF-like Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPQ2_ECTSI) HSP 1 Score: 366 bits (939), Expect = 4.440e-127 Identity = 181/194 (93.30%), Postives = 188/194 (96.91%), Query Frame = 1
Query: 1 QFSLIAGLFRYLFSKTEINVLILGLDYAGKTTLLEQMKGIFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARLAFETVKEQGELHGVPLLMLANKQDLPEAISTADISVQFDMHKITKVAFRLQSCSGLTCEGISEGILWIVNEAKKRTRPRVDA 582
FSLIAGL RYLFSKTEINVLILGLDYAGKTTLLEQMKGIFKKV GIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEAR+AF+TVKEQGELHGVPL+MLANKQDLPEAISTADISVQFDMHKITKVAFRLQ CSGLTC+G++EGI WIV+EAKKR RPRVDA
Sbjct: 1 MFSLIAGLIRYLFSKTEINVLILGLDYAGKTTLLEQMKGIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAISTADISVQFDMHKITKVAFRLQPCSGLTCDGVAEGIHWIVDEAKKRARPRVDA 194
BLAST of mRNA_H-elongata_contig1692.4299.1 vs. uniprot
Match: A0A835YY21_9STRA (ARFRP1, ARF-like ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY21_9STRA) HSP 1 Score: 268 bits (685), Expect = 1.940e-88 Identity = 128/189 (67.72%), Postives = 159/189 (84.13%), Query Frame = 1
Query: 1 QFSLIAGLFRYLFSKTEINVLILGLDYAGKTTLLEQMKGIFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARLAFETVKEQGELHGVPLLMLANKQDLPEAISTADISVQFDMHKITKVAFRLQSCSGLTCEGISEGILWIVNEAKKRTR 567
FSL+AGL+RYL SKT++NVLILGLD AGKTTLLEQMKGIFKKVPGIPP+KIPPT+GLNV KMD+GG +TFWD+GGQVR+R+LWE+YYADAH LI VMDSAD RFEEA+LAF V+EQ ELH +PLL+LANKQD+ A S DI+ QFD HK+ V FR+ + S L+ EG++EGI W++ +A+++T+
Sbjct: 1 MFSLLAGLWRYLTSKTQVNVLILGLDDAGKTTLLEQMKGIFKKVPGIPPAKIPPTIGLNVAKMDIGGVSVTFWDVGGQVRLRALWERYYADAHALICVMDSADAARFEEAQLAFHAVREQAELHALPLLLLANKQDVAGACSGGDIAAQFDAHKVMGVPFRVHAVSALSGEGVNEGISWLIAKAREKTQ 189
BLAST of mRNA_H-elongata_contig1692.4299.1 vs. uniprot
Match: A0A7S2BA16_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BA16_9STRA) HSP 1 Score: 255 bits (652), Expect = 1.310e-82 Identity = 117/189 (61.90%), Postives = 153/189 (80.95%), Query Frame = 1
Query: 1 QFSLIAGLFRYLFSKTEINVLILGLDYAGKTTLLEQMKGIFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARLAFETVKEQGELHGVPLLMLANKQDLPEAISTADISVQFDMHKITKVAFRLQSCSGLTCEGISEGILWIVNEAKKRTR 567
FSLI+G ++ F+K E+ VLILGLD+AGKTTLLEQMKG+F K GIPP +IPPT+GLN+GKMDVG C++ FWDLGGQVR+RS+WEKYYA+AHG++FV+DSADVGR EEA+LAF+ V+E EL G+P+L+LANKQDLP A++ DI++ F++H + RLQ S LTCEGI +G+ W+V E++ R
Sbjct: 60 MFSLISGFWKIFFAKVEVQVLILGLDHAGKTTLLEQMKGLFNKQQGIPPERIPPTIGLNIGKMDVGTCRVIFWDLGGQVRMRSIWEKYYAEAHGMVFVIDSADVGRMEEAKLAFDAVREHEELRGIPVLLLANKQDLPGAMAIEDIAMHFEIHNLPPRLVRLQPASCLTCEGIEDGVRWVVEESRTADR 248
BLAST of mRNA_H-elongata_contig1692.4299.1 vs. uniprot
Match: W7TPL1_9STRA (1-family small gtpase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPL1_9STRA) HSP 1 Score: 248 bits (633), Expect = 1.610e-80 Identity = 117/190 (61.58%), Postives = 152/190 (80.00%), Query Frame = 1
Query: 1 QFSLIAGLFRYLFSKTEINVLILGLDYAGKTTLLEQMKGIFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARLAFETVKEQGELHGVPLLMLANKQDLPEAISTADISVQFDMHKITKV-AFRLQSCSGLTCEGISEGILWIVNEAKKRTR 567
FSL+AG +YLFSKTE++VLILGLD+AGKTTLLEQ KGIF+KV GIPP KI PTVGLNVGKMD+ GC + WDLGGQVR+RS+W+KYYADAHG++FV+D+ADVGRFEEA+LAF ++ + +L VP+L+ ANKQDLP A+S D++ F++ ++ + ++ SCS LTCEG+ G+ W+V EAK R
Sbjct: 1 MFSLLAGFIKYLFSKTEVHVLILGLDHAGKTTLLEQSKGIFRKVQGIPPEKITPTVGLNVGKMDIEGCFVILWDLGGQVRMRSIWDKYYADAHGVVFVLDAADVGRFEEAKLAFASILDHEDLGDVPVLLFANKQDLPGALSEEDVAESFEIDRVLRHRVIQVHSCSALTCEGLESGVRWLVQEAKGLAR 190
BLAST of mRNA_H-elongata_contig1692.4299.1 vs. uniprot
Match: A0A7S2WHH1_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WHH1_9STRA) HSP 1 Score: 207 bits (528), Expect = 3.880e-64 Identity = 110/211 (52.13%), Postives = 142/211 (67.30%), Query Frame = 1
Query: 1 QFSLIAGLFRYLFSKTEINVLILGLDYAGKTTLLEQMKGIFKKVPG-IPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARLAFETVKEQGELHGVPLLMLANKQDLPEAISTADISVQF-----DMHKITKVAF---------------------RLQSCSGLTCEGISEGILWIVNEA 552
FSL++G F++LFSKTEI +LI+GLD+AGKTTLLEQMKGIF+K IP KIPPTVGLN+G+MD+ C++ FWDLGGQ+ +RS+W+KYY++AHGLIFV+DSAD+ RFEEA+ A E++ EL GVPLL+ ANKQDL + +I+ F + KI A +LQ S LTC GI +GI W+VN A
Sbjct: 1 MFSLLSGFFKWLFSKTEIQILIIGLDHAGKTTLLEQMKGIFQKAANQIPLDKIPPTVGLNIGRMDIDNCRVIFWDLGGQIALRSIWDKYYSEAHGLIFVLDSADIDRFEEAKAAMESIASHPELAGVPLLVCANKQDLATSRGYDEINEYFRVVSESLGKIGSNADSEQNSMNASEHILSLGKRRERKLQPVSALTCSGIEDGIRWLVNAA 211
BLAST of mRNA_H-elongata_contig1692.4299.1 vs. uniprot
Match: A0A4D9CTS6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTS6_9STRA) HSP 1 Score: 223 bits (568), Expect = 2.120e-63 Identity = 104/175 (59.43%), Postives = 138/175 (78.86%), Query Frame = 1
Query: 46 TEINVLILGLDYAGKTTLLEQMKGIFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARLAFETVKEQGELHGVPLLMLANKQDLPEAISTADISVQFDMHKITKV-AFRLQSCSGLTCEGISEGILWIVNEAKKRTR 567
++++VLILGLD+AGKTTLLEQ KGIF+KV GIPP KI PTVGLNVGKMD+ GC + WDLGGQVR+RS+W+KYYADAHG++FV+D+ADVGRFEEA+LAF ++ + +L VP+L+ ANKQDLP A+S D++ F + ++ + ++ CS LTCEG+ G+ W+V EAK R
Sbjct: 1022 SQLHVLILGLDHAGKTTLLEQSKGIFRKVQGIPPEKITPTVGLNVGKMDIEGCFVILWDLGGQVRMRSIWDKYYADAHGVVFVLDAADVGRFEEAKLAFASILDHEDLGDVPVLLFANKQDLPGALSEEDVAESFKIDRVLRHRVIQVHPCSALTCEGLESGVRWLVQEAKGLAR 1196
BLAST of mRNA_H-elongata_contig1692.4299.1 vs. uniprot
Match: A0A8J6CF14_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CF14_DIALT) HSP 1 Score: 203 bits (516), Expect = 1.040e-62 Identity = 100/191 (52.36%), Postives = 138/191 (72.25%), Query Frame = 1
Query: 1 QFSLIAGLFRYLFSKTEINVLILGLDYAGKTTLLEQMKGIFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARLAFETVKEQGELHGVPLLMLANKQDLPEAISTADISVQFDMHKITKVA--FRLQSCSGLTCEGISEGILWIVNEAKKRTR 567
FSLIAGLF YLF K E VLILG+D+AGKTT LEQMKG+F+K+ + P KIPPTVGLN+G+M+VG KL FWDLGGQ +R +WEKY+A+ HGL++V+D+AD RF+E+R FE + + +L GVP+L+LANKQDL A + +I +F + + +R++ S +T GI++GI W+V+ K +R
Sbjct: 1 MFSLIAGLFEYLFKKAEFQVLILGVDHAGKTTALEQMKGLFQKIEPLAPEKIPPTVGLNIGRMEVGRVKLIFWDLGGQSGLRGIWEKYFAEVHGLVYVIDAADDQRFDESRRIFEALVKHPDLAGVPVLILANKQDLHSAATIDEIDERFGFGSLCAPSQQYRIEPVSAITGSGIADGITWMVDMLKLSSR 191
BLAST of mRNA_H-elongata_contig1692.4299.1 vs. uniprot
Match: A0A484KDI7_9ASTE (Uncharacterized protein n=5 Tax=Convolvulaceae TaxID=4118 RepID=A0A484KDI7_9ASTE) HSP 1 Score: 197 bits (500), Expect = 3.240e-60 Identity = 100/199 (50.25%), Postives = 139/199 (69.85%), Query Frame = 1
Query: 1 QFSLIAGLFRYLFSKTEINVLILGLDYAGKTTLLEQMKGIFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARLAFETVKEQGELHGVPLLMLANKQDLPEAISTADISVQFDMHKITKVAFRLQSCSGLTCEGISEGILWIVN--EAKKRT---RPRVDA 582
FSL GL++Y+FSKTE +VLILG+D AGKTTLLE++K F + G+PP +I PTVGLN+G+++V KL FWDLGGQ +RS+WEKYY +AH ++FV+D+A RFE+A+ A E V +LHG PLL+LANKQDL EA S ++ D+ K+ + +++Q+ S GI E + W+V+ E KRT + RVD+
Sbjct: 1 MFSLFYGLWKYVFSKTEFHVLILGIDKAGKTTLLEKLKSQFLNIEGLPPDRIVPTVGLNIGRVEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVLFVVDAACPSRFEDAKSALEKVLRHEDLHGAPLLILANKQDLAEAASAEELDRYLDLKKLGERVYKIQAVSAYEGIGIKESVNWLVDAMERSKRTEMLKLRVDS 199
BLAST of mRNA_H-elongata_contig1692.4299.1 vs. uniprot
Match: A0A2R5GXN1_9STRA (ADP-ribosylation factor-related protein 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GXN1_9STRA) HSP 1 Score: 197 bits (502), Expect = 6.380e-60 Identity = 95/153 (62.09%), Postives = 121/153 (79.08%), Query Frame = 1
Query: 1 QFSLIAGLFRYLFSKTEINVLILGLDYAGKTTLLEQMKGIFKKVPG-IPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARLAFETVKEQGELHGVPLLMLANKQDLPEAISTADISVQFDM 456
FSL++G F++LFSKTE+ +LI+GLD+AGKTTLLEQMKGIF K IP KIPPTVGLN+G+MD+ C++ FWDLGGQ+ +RS+W+KYY++AHGLIFV+DSAD RFEEA+ A E++ + EL GVPLL+ ANKQDLP A DI F +
Sbjct: 1 MFSLLSGFFKWLFSKTEVQILIIGLDHAGKTTLLEQMKGIFHKSANQIPLDKIPPTVGLNIGRMDINNCRVIFWDLGGQIALRSIWDKYYSEAHGLIFVLDSADTDRFEEAKAAMESLVDHPELTGVPLLVCANKQDLPTAKEFEDIDAYFQI 153
BLAST of mRNA_H-elongata_contig1692.4299.1 vs. uniprot
Match: T0QBI1_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QBI1_SAPDV) HSP 1 Score: 195 bits (495), Expect = 1.630e-59 Identity = 93/190 (48.95%), Postives = 132/190 (69.47%), Query Frame = 1
Query: 1 QFSLIAGLFRYLFSKTEINVLILGLDYAGKTTLLEQMKGIFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARLAFETVKEQGELHGVPLLMLANKQDLPEAISTADISVQFDMHKI-TKVAFRLQSCSGLTCEGISEGILWIVNEAKKRTR 567
FSL+ G + YLFSK E+++LI+GLDYAGKTTLLEQ+KG F K PGIP KIPPTVGLN+ K+D+ + FWDLGGQ R+R++W KYY+++HG++FV+D+AD RF+EAR A +T+ EL G+P+L+LANK DL +A I+ + + + R QS S L+ +G+ + + W++ K R
Sbjct: 1 MFSLLLGFWNYLFSKAEVHILIIGLDYAGKTTLLEQLKGRFGKKPGIPLDKIPPTVGLNIAKVDISRTNVIFWDLGGQERLRAIWSKYYSESHGIVFVLDAADEARFDEARSALDTMLANAELDGIPILLLANKNDLADAQDMGVIAECLGVASLPSHHEARAQSISALSMDGVEDAVHWLIGAVKNSDR 190 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1692.4299.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1692.4299.1 >prot_H-elongata_contig1692.4299.1 ID=prot_H-elongata_contig1692.4299.1|Name=mRNA_H-elongata_contig1692.4299.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=159bp MKGIFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEback to top mRNA from alignment at H-elongata_contig1692:7878..10932+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig1692.4299.1 ID=mRNA_H-elongata_contig1692.4299.1|Name=mRNA_H-elongata_contig1692.4299.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3055bp|location=Sequence derived from alignment at H-elongata_contig1692:7878..10932+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig1692:7878..10932+ >mRNA_H-elongata_contig1692.4299.1 ID=mRNA_H-elongata_contig1692.4299.1|Name=mRNA_H-elongata_contig1692.4299.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=954bp|location=Sequence derived from alignment at H-elongata_contig1692:7878..10932+ (Himanthalia elongata Himel1 dioecious)back to top |