prot_H-elongata_contig105192.428.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig105192.428.1
Unique Nameprot_H-elongata_contig105192.428.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length145
Homology
BLAST of mRNA_H-elongata_contig105192.428.1 vs. uniprot
Match: UPI001E1BCD31 (secreted RxLR effector protein 161-like n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BCD31)

HSP 1 Score: 109 bits (272), Expect = 1.480e-26
Identity = 61/135 (45.19%), Postives = 87/135 (64.44%), Query Frame = 0
Query:    1 MRNFPYREAVGALMRM-TTTRPDIASTVCTVTRLCKNPGTTDTEAVIKIMQYPPHTKDWGIIYGGKSCGLCIEVYMDSDFGACLDTRSSMSSVVLMLAKGVISWYSRMQEVTASGTSEEEHVALSEAVKEVLFLR 134
            M+N PY+EAVGAL+ + TTTRPDI+  V  V +  +NPG    +AV +I++Y   T+ +GI+Y  +  G  +  Y D+D+G  LD R+S S  VL+ + G ISW+SR QE T+  T+E E V  SEA KE  ++R
Sbjct:   32 MKNIPYKEAVGALLYLSTTTRPDISYAVGQVAKFSQNPGIQHWKAVKRIIRYIAGTRTYGILYSQEK-GEMVTGYTDADYGGDLDDRTSTSGCVLLCSSGSISWFSRKQECTSLSTTESEFVTASEAAKEATWIR 165          
BLAST of mRNA_H-elongata_contig105192.428.1 vs. uniprot
Match: UPI0012673927 (secreted RxLR effector protein 161-like n=1 Tax=Photinus pyralis TaxID=7054 RepID=UPI0012673927)

HSP 1 Score: 95.5 bits (236), Expect = 4.180e-22
Identity = 55/132 (41.67%), Postives = 80/132 (60.61%), Query Frame = 0
Query:    4 FPYREAVGALMR-MTTTRPDIASTVCTVTRLCKNPGTTDTEAVIKIMQYPPHTKDWGIIY-GGKSCGLCIEVYMDSDFGACLDTRSSMSSVVLMLAKGVISWYSRMQEVTASGTSEEEHVALSEAVKEVLFL 133
            FPYR+AVGALM  M  TRPD+A +V  ++R+ +NP   D   V  + +Y   T ++GI+Y   K     +E+Y D+DFG C  T  S+S V++  + G ISW S+ Q V A+ T+E E +A  E  KE ++L
Sbjct:   29 FPYRQAVGALMYLMLGTRPDLAFSVGYISRVLENPTQEDVVQVKGVFRYIARTLNFGIVYCRRKEEAGVLEIYSDADFGGCTKTGRSISRVIVKYSGGAISWLSQRQAVVATSTTEAEIIAAKEGAKEAVWL 160          
BLAST of mRNA_H-elongata_contig105192.428.1 vs. uniprot
Match: A0A2J7QIE3_9NEOP (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7QIE3_9NEOP)

HSP 1 Score: 98.6 bits (244), Expect = 1.310e-21
Identity = 58/141 (41.13%), Postives = 81/141 (57.45%), Query Frame = 0
Query:    3 NFPYREAVGALMR-MTTTRPDIASTVCTVTRLCKNPGTTDTEAVIKIMQYPPHTKDWGIIYGGKSCGLCIEVYMDSDFGACLDTRSSMSSVVLMLAKGVISWYSRMQEVTASGTSEEEHVALSEAVKEVLFLRDRFRSSWN 142
            NFPYR+AVGALM  M  +RPD+A +V  ++R  +NP   D   + ++++Y   T  +GI+Y        +E Y D+D G C  T  S S  V++ A G ISW SR Q   A  ++E E VA SEA +EVL+L   F+   N
Sbjct:  166 NFPYRQAVGALMYLMIGSRPDLAYSVGVLSRCLENPSNEDVIKLKRVLRYIKGTLSYGIVYNSNVNSNSLECYSDADLGGCEKTARSTSGAVVLFAGGTISWKSRRQCSVAISSTEAELVAASEATREVLWLSRLFKEITN 306          
BLAST of mRNA_H-elongata_contig105192.428.1 vs. uniprot
Match: UPI001266EF5E (secreted RxLR effector protein 161-like n=1 Tax=Photinus pyralis TaxID=7054 RepID=UPI001266EF5E)

HSP 1 Score: 93.6 bits (231), Expect = 2.650e-21
Identity = 54/132 (40.91%), Postives = 79/132 (59.85%), Query Frame = 0
Query:    4 FPYREAVGALMR-MTTTRPDIASTVCTVTRLCKNPGTTDTEAVIKIMQYPPHTKDWGIIY-GGKSCGLCIEVYMDSDFGACLDTRSSMSSVVLMLAKGVISWYSRMQEVTASGTSEEEHVALSEAVKEVLFL 133
            FPYR+AVGALM  M  TRPD+A +V  + R+ +NP   D   V ++ +Y   T ++GI+Y   K     +E+Y D+DFG C  T  S S V++  + G ISW ++ Q V A+ T+E E +A +E  KE + L
Sbjct:   29 FPYRQAVGALMYLMLGTRPDLAYSVGYILRVLENPTQEDVVLVKRVFRYIAGTLNFGIVYCRRKEEAGVLEIYSDADFGGCTKTGRSTSEVIVKYSGGAISWLNQRQAVVATSTTETEIMAANEGAKEAILL 160          
BLAST of mRNA_H-elongata_contig105192.428.1 vs. uniprot
Match: A0A0V1B5K0_TRISP (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=6 Tax=Trichinella TaxID=6333 RepID=A0A0V1B5K0_TRISP)

HSP 1 Score: 98.6 bits (244), Expect = 3.820e-21
Identity = 57/132 (43.18%), Postives = 83/132 (62.88%), Query Frame = 0
Query:    3 NFPYREAVGALM-RMTTTRPDIASTVCTVTRLCKNPGTTDTEAVIKIMQYPPHTKDWGIIYGGKSCGLCIEVYMDSDFGACLDTRSSMSSVVLMLAKGVISWYSRMQEVTASGTSEEEHVALSEAVKEVLFL 133
            + PYREAVGAL+  MTTTRPDIA  V TV+++   P     +AV +I +Y   T D+G++Y  K  G  ++ Y D+D+   + TR S + VV M A G + W+S+ Q   A  T+E E+VA SEA K++++L
Sbjct: 1424 DIPYREAVGALLFLMTTTRPDIAYAVSTVSQVMDKPTIKAWQAVKRIFRYLRGTADYGLLYQAKGEGF-LKGYSDADYAGDVTTRRSRTGVVCMCAGGAVLWHSQKQRSVALSTTEAEYVAASEAAKDMMWL 1554          
BLAST of mRNA_H-elongata_contig105192.428.1 vs. uniprot
Match: A0A2Z7C9U2_9LAMI (Uncharacterized protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7C9U2_9LAMI)

HSP 1 Score: 95.9 bits (237), Expect = 4.440e-21
Identity = 52/136 (38.24%), Postives = 83/136 (61.03%), Query Frame = 0
Query:    1 MRNFPYREAVGALM-RMTTTRPDIASTVCTVTRLCKNPGTTDTEAVIKIMQYPPHTKDWGIIYGGKSCG-LCIEVYMDSDFGACLDTRSSMSSVVLMLAKGVISWYSRMQEVTASGTSEEEHVALSEAVKEVLFLR 134
            M++ PY   VG++M  M  TRPD+A  V  V+R   NPG    +A+  +M+Y   T++ G++YGG   G   +  Y+DSD+   +DTR S++  V  +    +SW + +Q V A  T+E E++A++EAVKE L+L+
Sbjct:   72 MKSVPYANVVGSVMYAMICTRPDLAHAVSVVSRFMANPGKCHWQALKWMMRYLKGTQNLGLVYGGNQTGGEAVLGYVDSDYAGSIDTRRSLTGYVFTVYGTAVSWKANLQSVVALSTTEAEYIAVTEAVKEALWLK 207          
BLAST of mRNA_H-elongata_contig105192.428.1 vs. uniprot
Match: A0A6A3J149_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3J149_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 4.730e-21
Identity = 54/135 (40.00%), Postives = 84/135 (62.22%), Query Frame = 0
Query:    1 MRNFPYREAVGALMRMTT-TRPDIASTVCTVTRLCKNPGTTDTEAVIKIMQYPPHTKDWGIIYGGKSCGLCIEVYMDSDFGACLDTRSSMSSVVLMLAKGVISWYSRMQEVTASGTSEEEHVALSEAVKEVLFLR 134
            M++ PYR  VG+LM +   TRPDI+  V  ++R  +NPG    +A IK+++Y   TKD GI+Y G   G  +E Y D+D+    D R S+S ++LML    + W S  Q+  A  ++E+E++ALS+ VKE +++R
Sbjct:   54 MKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEDEYMALSDCVKECVWMR 187          
BLAST of mRNA_H-elongata_contig105192.428.1 vs. uniprot
Match: A0A6A3MW41_9STRA (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MW41_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 4.860e-21
Identity = 54/135 (40.00%), Postives = 83/135 (61.48%), Query Frame = 0
Query:    1 MRNFPYREAVGALMRMTT-TRPDIASTVCTVTRLCKNPGTTDTEAVIKIMQYPPHTKDWGIIYGGKSCGLCIEVYMDSDFGACLDTRSSMSSVVLMLAKGVISWYSRMQEVTASGTSEEEHVALSEAVKEVLFLR 134
            M++ PYR  VG+LM +   TRPDI+  V  ++R  +NPG    +A IK+++Y   TKD GI+Y G   G  +E Y D+D+    D R S+S ++LML    + W S  Q+  A  ++E E++ALS+ VKE +++R
Sbjct:    1 MKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMR 134          
BLAST of mRNA_H-elongata_contig105192.428.1 vs. uniprot
Match: A0A4C2A9R9_EUMVA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C2A9R9_EUMVA)

HSP 1 Score: 92.8 bits (229), Expect = 6.420e-21
Identity = 55/130 (42.31%), Postives = 77/130 (59.23%), Query Frame = 0
Query:    6 YREAVGALMRMTT-TRPDIASTVCTVTRLCKNPGTTDTEAVIKIMQYPPHTKDWGIIYGGKSCGLCIEVYMDSDFGACLDTRSSMSSVVLMLAKGVISWYSRMQEVTASGTSEEEHVALSEAVKEVLFLR 134
            YRE +GALM +   TRPDIA+TV  + +    P   D  AV +I++Y   T   GI Y  K   +    Y D+D+G CL+ R S S  V +LA G + W S+ Q   A  ++E E+V+LSEAVKE+++LR
Sbjct:   32 YREVIGALMYLVVGTRPDIANTVSRLAQFVNEPCQQDWLAVKRILRYLAGTLKLGIFYTKKDKSMI--GYCDADWGGCLEDRRSYSGYVFILAGGAVRWKSQKQRTVALSSTESEYVSLSEAVKELIYLR 159          
BLAST of mRNA_H-elongata_contig105192.428.1 vs. uniprot
Match: UPI001C25E835 (secreted RxLR effector protein 161-like isoform X1 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C25E835)

HSP 1 Score: 94.0 bits (232), Expect = 1.160e-20
Identity = 49/135 (36.30%), Postives = 82/135 (60.74%), Query Frame = 0
Query:    1 MRNFPYREAVGALMR-MTTTRPDIASTVCTVTRLCKNPGTTDTEAVIKIMQYPPHTKDWGIIYGGKSCGLCIEVYMDSDFGACLDTRSSMSSVVLMLAKGVISWYSRMQEVTASGTSEEEHVALSEAVKEVLFLR 134
            M+  PY  A+G++M  M +TRPDIA  V  ++R   NPG    EA+  +++Y  HT  +G+ Y     G+ +  Y+DS++    D R S +S V  + +  ISW S++Q + A  T+E E++A++EA+KE ++L+
Sbjct:   74 MKKVPYANAIGSVMYLMVSTRPDIAYAVSCLSRYMSNPGPVHWEALKWLLRYLKHTSKYGLCYSRCEDGVKLTGYVDSNYANDRDKRKSTTSYVFTVCRSCISWKSQLQHIVALSTTESEYIAITEAMKEAVWLK 208          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig105192.428.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001E1BCD311.480e-2645.19secreted RxLR effector protein 161-like n=1 Tax=Da... [more]
UPI00126739274.180e-2241.67secreted RxLR effector protein 161-like n=1 Tax=Ph... [more]
A0A2J7QIE3_9NEOP1.310e-2141.13Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI001266EF5E2.650e-2140.91secreted RxLR effector protein 161-like n=1 Tax=Ph... [more]
A0A0V1B5K0_TRISP3.820e-2143.18Retrovirus-related Pol polyprotein from transposon... [more]
A0A2Z7C9U2_9LAMI4.440e-2138.24Uncharacterized protein n=1 Tax=Dorcoceras hygrome... [more]
A0A6A3J149_9STRA4.730e-2140.00Uncharacterized protein n=2 Tax=Phytophthora fraga... [more]
A0A6A3MW41_9STRA4.860e-2140.00Uncharacterized protein n=14 Tax=Phytophthora TaxI... [more]
A0A4C2A9R9_EUMVA6.420e-2142.31Retrovirus-related Pol polyprotein from transposon... [more]
UPI001C25E8351.160e-2036.30secreted RxLR effector protein 161-like isoform X1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 6..134
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 6..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig105192contigH-elongata_contig105192:1035..1469 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig105192.428.1mRNA_H-elongata_contig105192.428.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig105192 186..1693 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig105192.428.1 ID=prot_H-elongata_contig105192.428.1|Name=mRNA_H-elongata_contig105192.428.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=145bp
MRNFPYREAVGALMRMTTTRPDIASTVCTVTRLCKNPGTTDTEAVIKIMQ
YPPHTKDWGIIYGGKSCGLCIEVYMDSDFGACLDTRSSMSSVVLMLAKGV
ISWYSRMQEVTASGTSEEEHVALSEAVKEVLFLRDRFRSSWNRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like