mRNA_H-elongata_contig167904.4235.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig167904.4235.1 vs. uniprot
Match: D8LEA9_ECTSI (FYVE-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEA9_ECTSI) HSP 1 Score: 110 bits (276), Expect = 5.270e-27 Identity = 54/60 (90.00%), Postives = 59/60 (98.33%), Query Frame = 1
Query: 10 GFILAGRVGTGLVVSKTEEGFWSAPSAIATLGMGYGALIGGEITDFVLVLNTDSALEAFS 189
GFI+AGRVGTGLV+SKT+EG WSAPSAIATLGMG+GALIGGEITDFVLVLNTD+ALEAFS
Sbjct: 375 GFIVAGRVGTGLVISKTDEGVWSAPSAIATLGMGWGALIGGEITDFVLVLNTDAALEAFS 434
BLAST of mRNA_H-elongata_contig167904.4235.1 vs. uniprot
Match: A0A662Y0A5_9STRA (Ysc84 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y0A5_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 1.090e-19 Identity = 39/59 (66.10%), Postives = 49/59 (83.05%), Query Frame = 1
Query: 10 GFILAGRVGTGLVVSKTEEGFWSAPSAIATLGMGYGALIGGEITDFVLVLNTDSALEAF 186
GF+ GR+GTGLVV++ +G WSAPSAI T G+G+GA IGGEITDFV++LNT A+EAF
Sbjct: 2 GFVFTGRMGTGLVVARLPDGRWSAPSAIGTAGVGWGAQIGGEITDFVIILNTQRAVEAF 60
BLAST of mRNA_H-elongata_contig167904.4235.1 vs. uniprot
Match: A0A7S2UDR4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UDR4_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 2.880e-19 Identity = 36/60 (60.00%), Postives = 53/60 (88.33%), Query Frame = 1
Query: 7 SGFILAGRVGTGLVVSKTEEGFWSAPSAIATLGMGYGALIGGEITDFVLVLNTDSALEAF 186
+GF+++GRVGTGLV+++ +G WS P+AI T+G+G+GALIGG+ITD++LVLNTD A+ +F
Sbjct: 31 AGFVISGRVGTGLVIARRPDGSWSPPTAIGTVGVGWGALIGGDITDYLLVLNTDGAVRSF 90
BLAST of mRNA_H-elongata_contig167904.4235.1 vs. uniprot
Match: A0A8K1C966_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C966_PYTOL) HSP 1 Score: 88.6 bits (218), Expect = 3.400e-19 Identity = 40/60 (66.67%), Postives = 51/60 (85.00%), Query Frame = 1
Query: 10 GFILAGRVGTGLVVSKTEEGFWSAPSAIATLGMGYGALIGGEITDFVLVLNTDSALEAFS 189
GF+L GRVGTGLV+SK +G WSAPSAI T G+G+GA IGGE+TDFV++LNT A++AF+
Sbjct: 195 GFVLTGRVGTGLVISKLPDGRWSAPSAIGTAGIGWGAQIGGELTDFVIILNTKRAVDAFT 254
BLAST of mRNA_H-elongata_contig167904.4235.1 vs. uniprot
Match: M4BN30_HYAAE (FYVE-type domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BN30_HYAAE) HSP 1 Score: 88.2 bits (217), Expect = 3.630e-19 Identity = 41/59 (69.49%), Postives = 50/59 (84.75%), Query Frame = 1
Query: 10 GFILAGRVGTGLVVSKTEEGFWSAPSAIATLGMGYGALIGGEITDFVLVLNTDSALEAF 186
GF+ GR+GTGLVV+K +G WSAPSAIAT G+G+GA +GGEITDFV+VLNT A+EAF
Sbjct: 168 GFVFTGRMGTGLVVAKLADGRWSAPSAIATAGVGWGAQVGGEITDFVIVLNTPRAVEAF 226
BLAST of mRNA_H-elongata_contig167904.4235.1 vs. uniprot
Match: K3X8G2_GLOUD (FYVE-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8G2_GLOUD) HSP 1 Score: 87.0 bits (214), Expect = 7.940e-19 Identity = 40/59 (67.80%), Postives = 50/59 (84.75%), Query Frame = 1
Query: 10 GFILAGRVGTGLVVSKTEEGFWSAPSAIATLGMGYGALIGGEITDFVLVLNTDSALEAF 186
GF+ GRVGTGLVV++ +G WSAPSAIAT G+G+GA IGGEITDFV++LNT A++AF
Sbjct: 188 GFVFTGRVGTGLVVARLPDGRWSAPSAIATAGVGWGAQIGGEITDFVIILNTKRAVDAF 246
BLAST of mRNA_H-elongata_contig167904.4235.1 vs. uniprot
Match: A0A5D6Y5S5_9STRA (FYVE-type domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y5S5_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 9.020e-19 Identity = 40/59 (67.80%), Postives = 50/59 (84.75%), Query Frame = 1
Query: 10 GFILAGRVGTGLVVSKTEEGFWSAPSAIATLGMGYGALIGGEITDFVLVLNTDSALEAF 186
GF+ GRVGTGLV+++ +G WSAPSAIAT G+G+GA IGGEITDFV+VLNT A++AF
Sbjct: 174 GFVFTGRVGTGLVIARLPDGRWSAPSAIATAGVGWGAQIGGEITDFVIVLNTKRAVDAF 232
BLAST of mRNA_H-elongata_contig167904.4235.1 vs. uniprot
Match: A0A6G0WKF5_9STRA (FYVE-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WKF5_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 1.140e-18 Identity = 39/59 (66.10%), Postives = 50/59 (84.75%), Query Frame = 1
Query: 10 GFILAGRVGTGLVVSKTEEGFWSAPSAIATLGMGYGALIGGEITDFVLVLNTDSALEAF 186
GF+L GR+GTGLV+SK +G WSAPSAI T G+G+GA IGGE+TDFV++LNT SA++ F
Sbjct: 192 GFVLTGRLGTGLVLSKLPDGSWSAPSAIGTAGIGWGAQIGGEVTDFVIILNTRSAVDTF 250
BLAST of mRNA_H-elongata_contig167904.4235.1 vs. uniprot
Match: A0A2T9YXH3_9FUNG (Ysc84 domain-containing protein n=1 Tax=Smittium simulii TaxID=133385 RepID=A0A2T9YXH3_9FUNG) HSP 1 Score: 86.3 bits (212), Expect = 1.670e-18 Identity = 38/60 (63.33%), Postives = 52/60 (86.67%), Query Frame = 1
Query: 10 GFILAGRVGTGLVVSKTEEGFWSAPSAIATLGMGYGALIGGEITDFVLVLNTDSALEAFS 189
GFI +GR+GTGLV++K +G WSAPSAI TLG+G+G IGGE+TDFV++LN ++A++AFS
Sbjct: 67 GFIWSGRLGTGLVIAKLPDGSWSAPSAIGTLGIGFGGQIGGELTDFVMILNDENAVKAFS 126
BLAST of mRNA_H-elongata_contig167904.4235.1 vs. uniprot
Match: A0A2T9YWQ1_9FUNG (Ysc84 domain-containing protein n=1 Tax=Smittium simulii TaxID=133385 RepID=A0A2T9YWQ1_9FUNG) HSP 1 Score: 86.7 bits (213), Expect = 1.760e-18 Identity = 38/60 (63.33%), Postives = 52/60 (86.67%), Query Frame = 1
Query: 10 GFILAGRVGTGLVVSKTEEGFWSAPSAIATLGMGYGALIGGEITDFVLVLNTDSALEAFS 189
GFI +GR+GTGLV++K +G WSAPSAI TLG+G+G IGGE+TDFV++LN ++A++AFS
Sbjct: 49 GFIWSGRLGTGLVIAKLPDGSWSAPSAIGTLGIGFGGQIGGELTDFVMILNNENAVKAFS 108 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig167904.4235.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig167904.4235.1 >prot_H-elongata_contig167904.4235.1 ID=prot_H-elongata_contig167904.4235.1|Name=mRNA_H-elongata_contig167904.4235.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=63bp FISGFILAGRVGTGLVVSKTEEGFWSAPSAIATLGMGYGALIGGEITDFVback to top mRNA from alignment at H-elongata_contig167904:355..543- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig167904.4235.1 ID=mRNA_H-elongata_contig167904.4235.1|Name=mRNA_H-elongata_contig167904.4235.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=189bp|location=Sequence derived from alignment at H-elongata_contig167904:355..543- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig167904:355..543- >mRNA_H-elongata_contig167904.4235.1 ID=mRNA_H-elongata_contig167904.4235.1|Name=mRNA_H-elongata_contig167904.4235.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=378bp|location=Sequence derived from alignment at H-elongata_contig167904:355..543- (Himanthalia elongata Himel1 dioecious)back to top |