mRNA_H-elongata_contig105019.417.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig105019.417.1 vs. uniprot
Match: A0A6H5KI57_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KI57_9PHAE) HSP 1 Score: 285 bits (729), Expect = 8.580e-91 Identity = 142/162 (87.65%), Postives = 149/162 (91.98%), Query Frame = 1
Query: 1 QEKFTRVAVAFKVGGWHDDLLVATCVLQASILLGGGDSFSAGGPGKGMYSRLYREILNKYYWAEAAEAFSMIHDEAGLLGIAGAAPDKARAGQLMHVFCEHFATLAAVPVTDEELSRARNMLKCNVLTHLESRLVLFEDIGRQMLTYGRRETPEVGGRSVDR 486
++K TRV+VAFKVGGWHDDLLV TCVLQ +LLGGGDSFSAGGPGKGMYSRLYRE+LN++YWAEAAEAFSMIHDE GLLGIAGAA DK RAGQLMHVFCEHFATLA VPVTDEELSRARNMLKCNVLTHLESRLVLFEDIGRQMLTYGRRETPE G DR
Sbjct: 371 KDKLTRVSVAFKVGGWHDDLLVPTCVLQ--VLLGGGDSFSAGGPGKGMYSRLYREVLNRFYWAEAAEAFSMIHDETGLLGIAGAAADKLRAGQLMHVFCEHFATLATVPVTDEELSRARNMLKCNVLTHLESRLVLFEDIGRQMLTYGRRETPEARGLRQDR 530
BLAST of mRNA_H-elongata_contig105019.417.1 vs. uniprot
Match: K8YT24_NANGC (Peptidase_M16_C domain-containing protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YT24_NANGC) HSP 1 Score: 222 bits (566), Expect = 1.440e-69 Identity = 113/160 (70.62%), Postives = 126/160 (78.75%), Query Frame = 1
Query: 4 EKFTRVAVAFKVGGWHDDLLVATCVLQASILLGGGDSFSAGGPGKGMYSRLYREILNKYYWAEAAEAFSMIHDEAGLLGIAGAAPDKARAGQLMHVFCEHFATLAAVPVTDEELSRARNMLKCNVLTHLESRLVLFEDIGRQMLTYGRRETPEVGGRSVD 483
+ FTRVAV F+V GWHD LVA CV+Q ILLGGGDSFSAGGPGKGMYSRLYRE+LN+YYW E AEAF +H+E G+LGIAGA + ARAGQLMH FC LA PV ELSRARNMLKCNVLT LESR++LFEDIGRQM+TYG RE PE R +D
Sbjct: 133 DPFTRVAVGFEVAGWHDKDLVAMCVMQ--ILLGGGDSFSAGGPGKGMYSRLYRELLNRYYWVEGAEAFVNLHNETGVLGIAGAC-EAARAGQLMHEFCAQICKLALTPVDPVELSRARNMLKCNVLTQLESRIILFEDIGRQMITYGHREAPEALCRKID 289
BLAST of mRNA_H-elongata_contig105019.417.1 vs. uniprot
Match: W7TP27_9STRA (Peptidase M16 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TP27_9STRA) HSP 1 Score: 222 bits (566), Expect = 2.580e-67 Identity = 113/160 (70.62%), Postives = 126/160 (78.75%), Query Frame = 1
Query: 4 EKFTRVAVAFKVGGWHDDLLVATCVLQASILLGGGDSFSAGGPGKGMYSRLYREILNKYYWAEAAEAFSMIHDEAGLLGIAGAAPDKARAGQLMHVFCEHFATLAAVPVTDEELSRARNMLKCNVLTHLESRLVLFEDIGRQMLTYGRRETPEVGGRSVD 483
+ FTRVAV F+V GWHD LVA CV+Q ILLGGGDSFSAGGPGKGMYSRLYRE+LN+YYW E AEAF +H+E G+LGIAGA + ARAGQLMH FC LA PV ELSRARNMLKCNVLT LESR++LFEDIGRQM+TYG RE PE R +D
Sbjct: 335 DPFTRVAVGFEVAGWHDKDLVAMCVMQ--ILLGGGDSFSAGGPGKGMYSRLYRELLNRYYWVEGAEAFVNLHNETGVLGIAGAC-EAARAGQLMHEFCAQICKLALTPVDPVELSRARNMLKCNVLTQLESRIILFEDIGRQMITYGHREAPEALCRKID 491
BLAST of mRNA_H-elongata_contig105019.417.1 vs. uniprot
Match: A0A835Z8C4_9STRA (Mitochondrial processing peptidase alpha subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8C4_9STRA) HSP 1 Score: 211 bits (538), Expect = 4.070e-63 Identity = 114/172 (66.28%), Postives = 132/172 (76.74%), Query Frame = 1
Query: 1 QEKFTRVAVAFK--------VGGWHDDLLVATCVLQASILLGGGDSFSAGGPGKGMYSRLYREILNKYYWAEAAEAFSMIHDEAGLLGIAGAA--PDKARAGQLMHVFCEHFATLAAVPVTDEELSRARNMLKCNVLTHLESRLVLFEDIGRQMLTYGRRETPEVGGRSVDR 486
+E +TRV VAF+ VGGW V TCVLQ +LLGGGDSFSAGGPGKGMYSRLYRE+LN+++W E+AEAF+ +H E+GLLGIAGAA PD AG+LMHVF HF+ LA PV ELSRA+NMLKCNVLTHLESRLVLFEDIGRQ+L+YG RETPE +DR
Sbjct: 332 KEDWTRVCVAFEASDCAPAFVGGWDHPQFVPTCVLQ--VLLGGGDSFSAGGPGKGMYSRLYREVLNRHFWVESAEAFTSMHSESGLLGIAGAAAPPD---AGKLMHVFSNHFSKLALQPVDPVELSRAKNMLKCNVLTHLESRLVLFEDIGRQILSYGYRETPEAICEKIDR 498
BLAST of mRNA_H-elongata_contig105019.417.1 vs. uniprot
Match: A0A7S0GKU9_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GKU9_9STRA) HSP 1 Score: 204 bits (520), Expect = 6.950e-63 Identity = 108/162 (66.67%), Postives = 129/162 (79.63%), Query Frame = 1
Query: 4 EKFTRVAVAFKVGGWHD-DLLVATCVLQASILLGGGDSFSAGGPGKGMYSRLYREILNKYYWAEAAEAFSMIHDEAGLLGIAGAA-PDKARAGQLMHVFCEHFATLAAVPVTDEELSRARNMLKCNVLTHLESRLVLFEDIGRQMLTYGRRETPEVGGRSVD 483
E T+VA+AF+VGGWH DLLV TCVLQ ILLGGG+SFSAGGPGKGMYSRLYRE+LNKYYWAE+AE+F+ +H E GL GI+G++ P+ +R L V EHFA L V DEE+ RARNMLKCNVL+ LESRLVLFEDIGRQ+LTYG+RE+ E + +D
Sbjct: 112 EGHTKVALAFEVGGWHSGDLLVPTCVLQ--ILLGGGNSFSAGGPGKGMYSRLYREVLNKYYWAESAESFTSLHSETGLFGISGSSKPENSR--DLTRVITEHFAKLTTDLVKDEEIDRARNMLKCNVLSQLESRLVLFEDIGRQILTYGKRESVEEMCKKID 269
BLAST of mRNA_H-elongata_contig105019.417.1 vs. uniprot
Match: A0A6U3Q142_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3Q142_9STRA) HSP 1 Score: 209 bits (533), Expect = 4.230e-62 Identity = 110/159 (69.18%), Postives = 127/159 (79.87%), Query Frame = 1
Query: 10 FTRVAVAFKVGGWHDDLLVATCVLQASILLGGGDSFSAGGPGKGMYSRLYREILNKYYWAEAAEAFSMIHDEAGLLGIAGAA-PDKARAGQLMHVFCEHFATLAAVPVTDEELSRARNMLKCNVLTHLESRLVLFEDIGRQMLTYGRRETPEVGGRSVD 483
FTRVA+AF++GGWH D LV TCVLQ LLGGG+SFSAGGPGKGMYSRLYRE+LN+YYWAE AEAF+ H E+GLLGI+G++ P+K+R + V EHF LA VTDEEL RARNMLKCNVLT LESRLVLFEDIGRQ+LTYG+RE R +D
Sbjct: 376 FTRVALAFELGGWHSDDLVPTCVLQT--LLGGGNSFSAGGPGKGMYSRLYREVLNQYYWAERAEAFTSFHSESGLLGISGSSIPNKSR--DMTRVLAEHFYKLAHFYVTDEELDRARNMLKCNVLTQLESRLVLFEDIGRQILTYGKREDTASMCRKID 530
BLAST of mRNA_H-elongata_contig105019.417.1 vs. uniprot
Match: A0A7S2SHG1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SHG1_9STRA) HSP 1 Score: 199 bits (507), Expect = 1.150e-61 Identity = 103/160 (64.38%), Postives = 127/160 (79.38%), Query Frame = 1
Query: 10 FTRVAVAFKV-GGWHDDLLVATCVLQASILLGGGDSFSAGGPGKGMYSRLYREILNKYYWAEAAEAFSMIHDEAGLLGIAGAA-PDKARAGQLMHVFCEHFATLAAVPVTDEELSRARNMLKCNVLTHLESRLVLFEDIGRQMLTYGRRETPEVGGRSVD 483
+TR+A+AF++ GGWH D LV CVLQ LLGGG+SFSAGGPGKGMYSRLYRE+LN+YYWAE+AEAF+ H E+GLLG++G++ P K+R ++ V EHF L + VTDEEL RARNMLKCNVL+ LESRLVLFEDIGRQ+LTYG+RE + +D
Sbjct: 52 YTRIALAFEIPGGWHSDQLVTACVLQT--LLGGGNSFSAGGPGKGMYSRLYREVLNRYYWAESAEAFTTFHTESGLLGMSGSSLPTKSR--DVVRVLAEHFHKLTSEHVTDEELDRARNMLKCNVLSQLESRLVLFEDIGRQILTYGKREGTQEMCEKID 207
BLAST of mRNA_H-elongata_contig105019.417.1 vs. uniprot
Match: A0A7S2PHG5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PHG5_9STRA) HSP 1 Score: 199 bits (507), Expect = 6.190e-61 Identity = 105/150 (70.00%), Postives = 121/150 (80.67%), Query Frame = 1
Query: 13 TRVAVAFKV-GGWHD--DLLVATCVLQASILLGGGDSFSAGGPGKGMYSRLYREILNKYYWAEAAEAFSMIHDEAGLLGIAGAAPDKARAGQLMHVFCEHFATLAAVPVTDEELSRARNMLKCNVLTHLESRLVLFEDIGRQMLTYGRRE 453
TR+AVAF++ GGW++ LV CVLQ +LLGGG SFSAGGPGKGMYSRLYRE+LN+YYW EAAEAF+ H E+GLLGI GA P ++ L +FCEH A LA PVTDEEL RA+NMLKCNVLT LESRLVLFEDIGRQ+LTYG+RE
Sbjct: 109 TRIAVAFELSGGWNELEGDLVPACVLQ--VLLGGGSSFSAGGPGKGMYSRLYREVLNRYYWVEAAEAFTSFHSESGLLGIKGACPG-VKSLDLTRLFCEHMAKLAMFPVTDEELDRAKNMLKCNVLTQLESRLVLFEDIGRQILTYGKRE 255
BLAST of mRNA_H-elongata_contig105019.417.1 vs. uniprot
Match: B8BWG1_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWG1_THAPS) HSP 1 Score: 202 bits (514), Expect = 2.600e-59 Identity = 103/151 (68.21%), Postives = 122/151 (80.79%), Query Frame = 1
Query: 1 QEKFTRVAVAFKVGGWHDDLLVATCVLQASILLGGGDSFSAGGPGKGMYSRLYREILNKYYWAEAAEAFSMIHDEAGLLGIAGAAPDKARAGQLMHVFCEHFATLAAVPVTDEELSRARNMLKCNVLTHLESRLVLFEDIGRQMLTYGRRE 453
+E+FT VA+AF+VGGWH LV CVLQ LLGGG SFSAGGPGKGMYSRLYRE+LN+++WAE+AEAFS H E+GL GI+G+ P + R+G++ +HF LA VTDEEL RARNMLKCNVLT LESRLVLFEDIGRQ+LTYG+RE
Sbjct: 362 KEEFTFVAIAFEVGGWHSPDLVPVCVLQT--LLGGGSSFSAGGPGKGMYSRLYREVLNRFHWAESAEAFSSFHAESGLWGISGSCPAE-RSGEMTRALTDHFLKLADQLVTDEELDRARNMLKCNVLTQLESRLVLFEDIGRQILTYGKRE 509
BLAST of mRNA_H-elongata_contig105019.417.1 vs. uniprot
Match: A0A1Z5KCX7_FISSO (Mitochondrial-processing peptidase subunit alpha n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KCX7_FISSO) HSP 1 Score: 195 bits (496), Expect = 8.850e-57 Identity = 100/157 (63.69%), Postives = 121/157 (77.07%), Query Frame = 1
Query: 16 RVAVAFKVGGWHDDLLVATCVLQASILLGGGDSFSAGGPGKGMYSRLYREILNKYYWAEAAEAFSMIHDEAGLLGIAGAA-PDKARAGQLMHVFCEHFATLAAVPVTDEELSRARNMLKCNVLTHLESRLVLFEDIGRQMLTYGRRETPEVGGRSVD 483
R+ V F+VGGWH D LVATCVLQ LLGGG SFSAGGPGKGMYSRLYR +LN++ WAE+AEA++ H E+G+ GI+G+ P+ AR ++ VF H A LA V+DEEL RARNMLKCNVLT LESRLVLFED+GRQ+LTYG+RE V + +D
Sbjct: 363 RIGVGFEVGGWHSDALVATCVLQT--LLGGGSSFSAGGPGKGMYSRLYRRVLNQFGWAESAEAYTAFHSESGIWGISGSTMPENAR--NMVQVFTHHLAQLAVNHVSDEELDRARNMLKCNVLTQLESRLVLFEDMGRQVLTYGQRENMNVTCKKID 515 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig105019.417.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig105019.417.1 >prot_H-elongata_contig105019.417.1 ID=prot_H-elongata_contig105019.417.1|Name=mRNA_H-elongata_contig105019.417.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=163bp QEKFTRVAVAFKVGGWHDDLLVATCVLQASILLGGGDSFSAGGPGKGMYSback to top mRNA from alignment at H-elongata_contig105019:314..1803+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig105019.417.1 ID=mRNA_H-elongata_contig105019.417.1|Name=mRNA_H-elongata_contig105019.417.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1490bp|location=Sequence derived from alignment at H-elongata_contig105019:314..1803+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig105019:314..1803+ >mRNA_H-elongata_contig105019.417.1 ID=mRNA_H-elongata_contig105019.417.1|Name=mRNA_H-elongata_contig105019.417.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=978bp|location=Sequence derived from alignment at H-elongata_contig105019:314..1803+ (Himanthalia elongata Himel1 dioecious)back to top |