prot_H-elongata_contig164060.4048.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig164060.4048.1
Unique Nameprot_H-elongata_contig164060.4048.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length62
Homology
BLAST of mRNA_H-elongata_contig164060.4048.1 vs. uniprot
Match: D7FMY2_ECTSI (Hydroxymethylbilane synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMY2_ECTSI)

HSP 1 Score: 117 bits (293), Expect = 3.790e-30
Identity = 53/58 (91.38%), Postives = 56/58 (96.55%), Query Frame = 0
Query:    1 MLPAVAQGAIGIQCRQNDPTFEKYLAGLCHEETKIAVDCERSFLATLDGNCKTPIAGQ 58
            MLPAVAQGAIGIQCR+NDPTFEKYLAGLCH+ETK AVDCER+FLA LDGNCKTPIAGQ
Sbjct:  249 MLPAVAQGAIGIQCRENDPTFEKYLAGLCHQETKTAVDCERAFLAALDGNCKTPIAGQ 306          
BLAST of mRNA_H-elongata_contig164060.4048.1 vs. uniprot
Match: A0A6T6AQC6_DIALT (Hydroxymethylbilane synthase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A6T6AQC6_DIALT)

HSP 1 Score: 99.8 bits (247), Expect = 1.530e-23
Identity = 48/58 (82.76%), Postives = 50/58 (86.21%), Query Frame = 0
Query:    1 MLPAVAQGAIGIQCRQNDPTFEKYLAGLCHEETKIAVDCERSFLATLDGNCKTPIAGQ 58
            MLPAVAQGAIGIQCR +D    KYLA L H ETKIAVDCER+FLATLDGNCKTPIAGQ
Sbjct:  242 MLPAVAQGAIGIQCRSDDERSLKYLAALTHAETKIAVDCERAFLATLDGNCKTPIAGQ 299          
BLAST of mRNA_H-elongata_contig164060.4048.1 vs. uniprot
Match: W7UC09_9STRA (Hydroxymethylbilane synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UC09_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 6.060e-23
Identity = 47/58 (81.03%), Postives = 49/58 (84.48%), Query Frame = 0
Query:    1 MLPAVAQGAIGIQCRQNDPTFEKYLAGLCHEETKIAVDCERSFLATLDGNCKTPIAGQ 58
            MLPAVAQGAIGIQCR +D T  KYLA L H ETK+ VDCERSFLA LDGNCKTPIAGQ
Sbjct:  236 MLPAVAQGAIGIQCRSDDATSLKYLAALNHPETKVCVDCERSFLAELDGNCKTPIAGQ 293          
BLAST of mRNA_H-elongata_contig164060.4048.1 vs. uniprot
Match: A0A6S9LNX4_HETAK (Hydroxymethylbilane synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9LNX4_HETAK)

HSP 1 Score: 97.8 bits (242), Expect = 7.790e-23
Identity = 45/58 (77.59%), Postives = 51/58 (87.93%), Query Frame = 0
Query:    1 MLPAVAQGAIGIQCRQNDPTFEKYLAGLCHEETKIAVDCERSFLATLDGNCKTPIAGQ 58
            MLPAVAQGAIGIQCR+ND + ++YLA L H +TK AVDCER+FL TLDGNCKTPIAGQ
Sbjct:  233 MLPAVAQGAIGIQCRENDESAQRYLAALNHADTKTAVDCERAFLDTLDGNCKTPIAGQ 290          
BLAST of mRNA_H-elongata_contig164060.4048.1 vs. uniprot
Match: A0A0M0J546_9EUKA (Hydroxymethylbilane synthase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J546_9EUKA)

HSP 1 Score: 96.3 bits (238), Expect = 4.240e-22
Identity = 43/58 (74.14%), Postives = 50/58 (86.21%), Query Frame = 0
Query:    1 MLPAVAQGAIGIQCRQNDPTFEKYLAGLCHEETKIAVDCERSFLATLDGNCKTPIAGQ 58
            MLPAVAQGAIGIQCR+ND    +YLA L H++TK+ VDCER+FLA LDGNC+TPIAGQ
Sbjct:  236 MLPAVAQGAIGIQCRENDQKMLRYLAALNHQDTKVCVDCERAFLAALDGNCRTPIAGQ 293          
BLAST of mRNA_H-elongata_contig164060.4048.1 vs. uniprot
Match: A0A7S4BP62_CHRCT (Hydroxymethylbilane synthase n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BP62_CHRCT)

HSP 1 Score: 94.7 bits (234), Expect = 1.490e-21
Identity = 44/58 (75.86%), Postives = 48/58 (82.76%), Query Frame = 0
Query:    1 MLPAVAQGAIGIQCRQNDPTFEKYLAGLCHEETKIAVDCERSFLATLDGNCKTPIAGQ 58
            MLPAVAQGAIGIQCR+ D     YLA L HE TK+AVDCER+FLA LDGNC+TPIAGQ
Sbjct:  249 MLPAVAQGAIGIQCREGDARIINYLAALNHEPTKVAVDCERAFLAALDGNCRTPIAGQ 306          
BLAST of mRNA_H-elongata_contig164060.4048.1 vs. uniprot
Match: A0A835YJY2_9STRA (Hydroxymethylbilane synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJY2_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 3.300e-21
Identity = 44/58 (75.86%), Postives = 49/58 (84.48%), Query Frame = 0
Query:    1 MLPAVAQGAIGIQCRQNDPTFEKYLAGLCHEETKIAVDCERSFLATLDGNCKTPIAGQ 58
            MLPAV+QGAIGIQCR+ D T  KYLA L   +TK+AVDCER+FLA LDGNCKTPIAGQ
Sbjct:  234 MLPAVSQGAIGIQCREGDETMLKYLAALNCADTKVAVDCERAFLAALDGNCKTPIAGQ 291          
BLAST of mRNA_H-elongata_contig164060.4048.1 vs. uniprot
Match: A0A7S0LKM4_9EUKA (Hydroxymethylbilane synthase n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LKM4_9EUKA)

HSP 1 Score: 93.2 bits (230), Expect = 5.580e-21
Identity = 43/58 (74.14%), Postives = 48/58 (82.76%), Query Frame = 0
Query:    1 MLPAVAQGAIGIQCRQNDPTFEKYLAGLCHEETKIAVDCERSFLATLDGNCKTPIAGQ 58
            MLPAVAQGAIGIQCR+ D    +YL  L H ETK+AVDCER+FLA LDGNC+TPIAGQ
Sbjct:  249 MLPAVAQGAIGIQCREGDEKILRYLDALNHPETKVAVDCERAFLAALDGNCRTPIAGQ 306          
BLAST of mRNA_H-elongata_contig164060.4048.1 vs. uniprot
Match: A0A1Z5JU54_FISSO (Hydroxymethylbilane synthase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JU54_FISSO)

HSP 1 Score: 92.8 bits (229), Expect = 5.650e-21
Identity = 44/58 (75.86%), Postives = 46/58 (79.31%), Query Frame = 0
Query:    1 MLPAVAQGAIGIQCRQNDPTFEKYLAGLCHEETKIAVDCERSFLATLDGNCKTPIAGQ 58
            MLPAVAQGAIGIQCR ND    KY+A L H ETK  VDCER+FL  LDGNCKTPIAGQ
Sbjct:  227 MLPAVAQGAIGIQCRDNDERSLKYIAALNHAETKACVDCERAFLEALDGNCKTPIAGQ 284          
BLAST of mRNA_H-elongata_contig164060.4048.1 vs. uniprot
Match: B7FFZ8_MEDTR (Hydroxymethylbilane synthase n=1 Tax=Medicago truncatula TaxID=3880 RepID=B7FFZ8_MEDTR)

HSP 1 Score: 89.7 bits (221), Expect = 9.460e-21
Identity = 40/57 (70.18%), Postives = 47/57 (82.46%), Query Frame = 0
Query:    1 MLPAVAQGAIGIQCRQNDPTFEKYLAGLCHEETKIAVDCERSFLATLDGNCKTPIAG 57
            MLPAVAQGAIGI CR ND    +YLA L HEET++A+ CER+FL TLDG+C+TPIAG
Sbjct:  112 MLPAVAQGAIGIACRSNDDKMAEYLASLNHEETRLAISCERAFLTTLDGSCRTPIAG 168          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig164060.4048.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMY2_ECTSI3.790e-3091.38Hydroxymethylbilane synthase n=2 Tax=Ectocarpus Ta... [more]
A0A6T6AQC6_DIALT1.530e-2382.76Hydroxymethylbilane synthase n=2 Tax=Diacronema lu... [more]
W7UC09_9STRA6.060e-2381.03Hydroxymethylbilane synthase n=2 Tax=Monodopsidace... [more]
A0A6S9LNX4_HETAK7.790e-2377.59Hydroxymethylbilane synthase n=1 Tax=Heterosigma a... [more]
A0A0M0J546_9EUKA4.240e-2274.14Hydroxymethylbilane synthase n=1 Tax=Chrysochromul... [more]
A0A7S4BP62_CHRCT1.490e-2175.86Hydroxymethylbilane synthase n=1 Tax=Chrysotila ca... [more]
A0A835YJY2_9STRA3.300e-2175.86Hydroxymethylbilane synthase n=1 Tax=Tribonema min... [more]
A0A7S0LKM4_9EUKA5.580e-2174.14Hydroxymethylbilane synthase n=1 Tax=Coccolithus b... [more]
A0A1Z5JU54_FISSO5.650e-2175.86Hydroxymethylbilane synthase n=2 Tax=Fistulifera s... [more]
B7FFZ8_MEDTR9.460e-2170.18Hydroxymethylbilane synthase n=1 Tax=Medicago trun... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036803Porphobilinogen deaminase, C-terminal domain superfamilyGENE3D3.30.160.40coord: 30..61
e-value: 7.2E-11
score: 43.9
IPR036803Porphobilinogen deaminase, C-terminal domain superfamilySUPERFAMILY54782Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domaincoord: 30..58
IPR022418Porphobilinogen deaminase, C-terminalPFAMPF03900Porphobil_deamCcoord: 35..57
e-value: 5.7E-6
score: 26.6
IPR000860Porphobilinogen deaminasePANTHERPTHR11557PORPHOBILINOGEN DEAMINASEcoord: 1..58
IPR022419Porphobilinogen deaminase, dipyrromethane cofactor binding sitePROSITEPS00533PORPHOBILINOGEN_DEAMcoord: 40..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig164060contigH-elongata_contig164060:76..1061 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig164060.4048.1mRNA_H-elongata_contig164060.4048.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig164060 76..1061 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig164060.4048.1 ID=prot_H-elongata_contig164060.4048.1|Name=mRNA_H-elongata_contig164060.4048.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=62bp
MLPAVAQGAIGIQCRQNDPTFEKYLAGLCHEETKIAVDCERSFLATLDGN
CKTPIAGQVIQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036803Porphobilinogen_deaminase_C_sf
IPR022418Porphobilinogen_deaminase_C
IPR000860HemC
IPR022419Porphobilin_deaminase_cofac_BS