prot_H-elongata_contig10000.4.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10000.4.1
Unique Nameprot_H-elongata_contig10000.4.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length739
Homology
BLAST of mRNA_H-elongata_contig10000.4.1 vs. uniprot
Match: A0A6H5JZJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZJ7_9PHAE)

HSP 1 Score: 259 bits (661), Expect = 2.210e-75
Identity = 153/320 (47.81%), Postives = 207/320 (64.69%), Query Frame = 0
Query:  341 RQAVTARSRASSPPAPSXXXXXXXXXXXXXIPHDLARLAKKQIKQLCGLLAGTERPYPGPCGLDEPISEIAGFVRESHNAWRAVGSRRQAGSGGPASRARCGLVIAGRSGTGKSTAFQAAMR-SVATEDRAATLRFVTIKCAQIY-GNPNEVFSSILAAVTGSSMRVDADSALEVLSRLDEPPPSLPVICL-DYAERLKPFVLQRLLSMAAQGKALFAVVCLVGSLDMGEEIVYNQGCLERDCSLVAMLGCKEDQLRAILGQTLGAASPEDKDGELIASLVNKGALDVIAKTVARVCGSARIALNVCEVAFAERLLELDQ 657
            RQAVTAR  A SPPAPS             +  +L RLA KQ+K + G+L GTERP+PGPCG++ P++++  FV+++HNAW A   +R              +V+AG  G+GKSTAFQAA + S+    +  TLRFVTIK  Q+   +PN++FS +L +VT +  R+D   ALE L RL EP   L V  + D  + L    L+RLL +A +G + FAVV +V SLD   E+ + QG   RDC ++ M+ C+ED+LRAILGQ+LGA+ P+DKDGE++A LVNK ALD IA  VARV GS R+AL+VCEVA   R+ EL++
Sbjct:    2 RQAVTARRLAKSPPAPSPAKRPKRAAPQVTL-KELVRLANKQLKTVRGILDGTERPFPGPCGVERPVADVVKFVKKAHNAWLAQLQQRNNVGALQGMIGAGAMVLAGPRGSGKSTAFQAAAKASIVGVAKVTTLRFVTIKGDQLNEDDPNDIFSKVLRSVTNA--RMDGKRALEELGRLSEPSRFLTVFAVEDVKQTLSSVTLERLLDLAYKGGSPFAVVYMVPSLDRAIELKFEQGMKRRDCRVIHMMPCEEDRLRAILGQSLGASGPDDKDGEVVAGLVNKAALDTIASVVARVSGSIRVALHVCEVALGNRVRELEK 318          
BLAST of mRNA_H-elongata_contig10000.4.1 vs. uniprot
Match: D8LKB1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKB1_ECTSI)

HSP 1 Score: 212 bits (540), Expect = 8.320e-57
Identity = 173/447 (38.70%), Postives = 217/447 (48.55%), Query Frame = 0
Query:   39 KRPGVLLDFGTGTSFSSFAELWNYLLHNGWGTSPGKGLASWHYFPPGSDPKKRNSILDEDYFTSEEMVINYVRRTGLERPAPVTTVSRRSSSSTPSQRTNSRTADVR----PNAGKRSQSTTPVSSSGKRRSSPASAXXXXXXXXXXXPSSVVARSSVKVAVAASATVKDGRSNKGNKNKGDAPVRSKDRGKVSARTGAGADARSAVERDSVRNFDDLRTKERQDDGGGVELFFTAD--------------------EGQKGGRGDSQGAETIGDSDEKDHHSWRSDRQ-EDFHVGPKRSHGRTMVVEAANMSSARGSPPNIVGEVTRQAVTARSRASSPPAPSXXXXXXXXXXXXXIPHDLARLAKKQIKQLCGLLAGTERPYPGPCGLDEPISEIAGFVRESHNAWRAVGSRRQAGSGGPASRARCGLVIAGRSGTGKSTAFQAA 460
            KR GVLLDFGTGTSF+SFAELWNYL HNGW T PGKGLASWHYFPPGSDPK R+ +L  D+F SE+ VI++VRRTGLERPAPV TV  RSS  + S+  ++R +D R    P A  ++    P S  GKR+ S  S       XXXXX                                                                                                             +G+KG     +GA   G  + +     +  R  E   VG KRSHG+TM VEAA +S  RGS PN+  +V RQAVTAR  A SPPAPS              P +L RLA KQ+K + G+L GTERP+PGPCG++ P++++  FV+++HNAW A   +R   +          +V+AG  G+GKSTAFQAA
Sbjct:   57 KRTGVLLDFGTGTSFASFAELWNYLRHNGWATLPGKGLASWHYFPPGSDPKMRHPVLRRDFFDSEDAVIDHVRRTGLERPAPVGTVIGRSSPGSTSRPGSTRVSDARRSPPPTAPTQADPGKPAS--GKRKPSSRSGAAVAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGEKG-----EGAVPSGGGEARRGRPQQGGRDTEPSAVGGKRSHGKTMQVEAALVSPPRGSAPNLTRQVMRQAVTARRLAKSPPAPSPSKRPKRAAPQVA-PKELVRLANKQLKTVRGILDGTERPFPGPCGVERPVADVVKFVKKAHNAWLAQLQQRNNVAALQGMIGAGAIVLAGPRGSGKSTAFQAA 495          
BLAST of mRNA_H-elongata_contig10000.4.1 vs. uniprot
Match: A0A6H5JYH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYH6_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 5.910e-39
Identity = 90/156 (57.69%), Postives = 107/156 (68.59%), Query Frame = 0
Query:    1 MKHHFGPALAAADAIMKGRPSEPGGSKN----TRPPTPGSSS-------KRPGVLLDFGTGTSFSSFAELWNYLLHNGWGTSPGKGLASWHYFPPGSDPKKRNSILDEDYFTSEEMVINYVRRTGLERPAPVTTVSRRSSSSTPSQRTNSRTADVR 145
            +KH F PALAAAD++ + +               P TP S +       KR GVLLDFGTGTSF+SFAELWNYL HNGW T PGKGLASWHYFPPGSDPK R+ +L  D+F SE+ VI++VRRTGLERPAPV TV  RSS  + S+  +SR +D R
Sbjct:  106 LKHQFAPALAAADSMTRQQXXXXXXXXXXXSCATPGTPVSKASMAHMNPKRTGVLLDFGTGTSFASFAELWNYLRHNGWATLPGKGLASWHYFPPGSDPKMRHPVLRRDFFDSEDAVIDHVRRTGLERPAPVGTVIGRSSPGSTSRSGSSRVSDAR 261          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10000.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JZJ7_9PHAE2.210e-7547.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKB1_ECTSI8.320e-5738.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYH6_9PHAE5.910e-3957.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 434..572
e-value: 1.1E-9
score: 40.3
NoneNo IPR availablePANTHERPTHR10763CELL DIVISION CONTROL PROTEIN 6-RELATEDcoord: 127..648
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 443..651

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10000contigH-elongata_contig10000:3051..8713 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10000.4.1mRNA_H-elongata_contig10000.4.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10000 1845..9039 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10000.4.1 ID=prot_H-elongata_contig10000.4.1|Name=mRNA_H-elongata_contig10000.4.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=739bp
MKHHFGPALAAADAIMKGRPSEPGGSKNTRPPTPGSSSKRPGVLLDFGTG
TSFSSFAELWNYLLHNGWGTSPGKGLASWHYFPPGSDPKKRNSILDEDYF
TSEEMVINYVRRTGLERPAPVTTVSRRSSSSTPSQRTNSRTADVRPNAGK
RSQSTTPVSSSGKRRSSPASAPSAQAKTKSTEPSSVVARSSVKVAVAASA
TVKDGRSNKGNKNKGDAPVRSKDRGKVSARTGAGADARSAVERDSVRNFD
DLRTKERQDDGGGVELFFTADEGQKGGRGDSQGAETIGDSDEKDHHSWRS
DRQEDFHVGPKRSHGRTMVVEAANMSSARGSPPNIVGEVTRQAVTARSRA
SSPPAPSPSKRPKRRPGPSPIPHDLARLAKKQIKQLCGLLAGTERPYPGP
CGLDEPISEIAGFVRESHNAWRAVGSRRQAGSGGPASRARCGLVIAGRSG
TGKSTAFQAAMRSVATEDRAATLRFVTIKCAQIYGNPNEVFSSILAAVTG
SSMRVDADSALEVLSRLDEPPPSLPVICLDYAERLKPFVLQRLLSMAAQG
KALFAVVCLVGSLDMGEEIVYNQGCLERDCSLVAMLGCKEDQLRAILGQT
LGAASPEDKDGELIASLVNKGALDVIAKTVARVCGSARIALNVCEVAFAE
RLLELDQMVGGTSALAVATRPSMSSSGGADSTSACFSQSPSCSSSLNSGA
GALNALLTVAGAKAALNKYLVQRPEAVWGGEAEEQTPP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase