prot_H-elongata_contig16211.3950.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16211.3950.1
Unique Nameprot_H-elongata_contig16211.3950.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length1640
Homology
BLAST of mRNA_H-elongata_contig16211.3950.1 vs. uniprot
Match: A0A6H5KK87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK87_9PHAE)

HSP 1 Score: 457 bits (1176), Expect = 1.320e-134
Identity = 393/1157 (33.97%), Postives = 544/1157 (47.02%), Query Frame = 0
Query:  523 VLQVHRVMESLFLLVAQKWAGSLGHP-GPKHAACMRTTVRGVSNGGIAFEEALRLTDIVFCAYERTLVYQHALADRSKDNTHVIAFVACMGVAVDTASMVL-RNRLLRIPSDNNERA---------HALRVRPSFIQESELTKLPQGDNDLHMMKDGVLHFFKEARVGDVAYSDEDHARAERKNSVESAASASTSCLDTILITAIKGDMISWILALYARCSDTPSHYSGEGKVENAPADSTALYRIPERLTGDNAECRATARYVLAEALKSMLHAQGWVNGLHANEVNEGLSLAKKGAVDDGKIDSLSDNIMGCAMTSKR--DALGIALRSWRN---SCGENDETTSLDHHALSLLGTSVDNGNVCKLVVLLISLSPSYLGVLHPHPGCRVDSASKLLRFVKTVSEAVFILNMFSYAI---------------SSRATEDIARFSPLPPALAAAVADLLARFPVAELATSSIPLSSMTISTIVRADGAAFVADWLVACPLLRIRRAMQGLGLPDELRGNENGGRVACLSAASCDDCDRRALTGVLEAVVGRWSAELS-NGLQHSRAEATILRLSSVLLLSPDTFFDLVFTSRHSCLEEGPEAQYKTRATSAQSLGIVIVDTLGEISSALSSVMLRRSEDDITKYDRASKLMCAFQVLQLASAFLDVGCIHGHYASLAANRDNFTPACTPI-SHRLPLEFAFARACGGLLRGLLDPHRSQCGNSEAGICEDGSRDSVLFCALNLFSALIVLSGSRADL-RQSKHDWTLAFEDAHGAIYDVLHSPDMVVDKLGNWVDSAPEMLASFLQVCAIWNVIFSPSGVKVSGGTRLDPPFEVLAEVLRLGCQGPRDMKNTAQRTGRLLKKRRFHTREKGSCVLLQLFAARCVESMAPTKPFSKREVQVLQLSLQDTACIDDAVLTSAALGAIRTLWEAYFGFLQMNELVGQSWNSFVIESCLDTALRLLMTRKDNSTAVDGLLGPGAMGFWADFCLGEGSSQRFGINAAMILSAVGRLVSSSVGKSFPRLRAAIVPDCRSVEVLSLRSLTCVQQCAIFISKELRMTMETWSVHASH--GAEDCIDERYAERGVQPR--RRVGRRLENDLDLVTFHLSDALAQLLGVLKYIE-MPPPRGTRIPGTLRKEVVDALSQVRSTLASSLE 1640
            VLQ  RV ESL L  A++W  S G   G            G    G   EE++ L D+VF +YERTL YQ  L  RS++  H +A+++C+G AVD  S VL   R       +  R              VRPSF+   EL +   G       +         A  G V   +++++ A  + S+ +      SCL TIL   ++ D++SW+L LYARC    S     G     P+ S+          G      AT   +L E L+S+LHAQGWVNG+ A+                        + M C        + + + L+SW     S GE +    LDH  +S LG   DNG++CKLVVLL+S+SPS+LGVLHPH GCR+DSA  LLR++KTV EAVF LN+FS+ I               SSR  ED          L+AAV DLLARF V E+A S IPLS+  IS  + A   AFV+DWLVA PL R++RA+   G   E +G  +      ++  S    +R AL G+L A + RW  E   +   HS+++A I RL+ VLL+SPDT   L F S     +  P          A +L  +I +TL  +S+ALS V+ R S+   T Y  ASKL CA  V Q+ASAFL   C +G+Y ++    D    A T   S + P E   ARACGGLL+GLL   R Q    + G     S    L   LNL  AL+VL G  + L R++     LA +++  A+ ++L S  +  ++L  W+D AP++LA+FLQV A+                                                                       RCVE  A T  F+ +EV  LQL+LQ  AC     L +AA GAI+ LWE+Y G LQ  +LVGQSWN F++E  L+ ALR L +R   S A  GLL              E     F + A +++SA+GRL+  S GK+  RLR +      ++E+LS  ++  V +C   ++  LR+ +   +V      G    +  + +      R  + +    E   D    HL DAL +L+ VL  IE +    G  +    RKE++DAL  + S L  S E
Sbjct:   24 VLQCARVYESL-LHTAEEWVSSQGSTVGGMSCQASANRFGGGGRRGTRGEESVSLADLVFGSYERTLSYQCNLIARSENLAHDVAWLSCLGAAVDATSAVLFHKRXXXXXXXSGGRTSKNGTMGSWQLFNVRPSFVNTQELDRDCVGFPGSGGSR---------ASGGAVGGGEQEYSIAPGEVSIPA------SCLGTILKMVVEADVVSWMLNLYARCGGDRS----SGGTTTHPSRSSEGSSDVVDAHG------ATTCALLMEVLQSLLHAQGWVNGVCAHGAGR------------------PSHEMECGDRGSTFGETVRLMLQSWTTRGVSSGE-EVHMPLDHFVMSQLGKRADNGDLCKLVVLLVSVSPSFLGVLHPHVGCRIDSAVTLLRYIKTVPEAVFCLNLFSHIILVEGDKIDGGRGGELSSRLGED----------LSAAVKDLLARFSVEEVALSLIPLSASAISFALLAGCEAFVSDWLVAAPLARVKRALTEFGAFCERQGATDDDIADLVAGCS----ERVALKGILGATLRRWRVEAGKDSPHHSQSDAVIYRLACVLLMSPDTLLSLAFDS-----DSHPNGPMDLEQELASALATIIPETLEGLSAALSPVVSRHSDRGNTNY-LASKLECASCVSQIASAFLHARCTYGYYTTI----DRDVRARTGFASCQEPPEIPLARACGGLLQGLLRQRRGQGSFGDGG----DSTFKALLSVLNLLGALLVLVGRDSFLLRKTNQGLVLALQESCAALSEMLASTAVATERLTGWLDHAPDVLAAFLQVLAV-----------------------------------------------------------------------RCVEGAAQTGFFNGQEVLALQLALQGIACHGGPTLAAAAHGAIQALWESYSGVLQSADLVGQSWNPFMVECSLENALRSL-SRDQESGAGLGLLPS------------EKDPDEFQVGAPVLVSAIGRLLRWSAGKTCLRLRTSGALAGCNIELLSATAVAAVCRCTALLATNLRIALGDGTVQRDDRLGKRPRLGYQSSSNSSSGRSLKEMAENGEKGGDGERLHLFDALTRLVDVLTCIEPILSQAGLDLRSQARKELLDALVPLHSALVYSRE 1023          
BLAST of mRNA_H-elongata_contig16211.3950.1 vs. uniprot
Match: D8LNY6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNY6_ECTSI)

HSP 1 Score: 333 bits (855), Expect = 2.390e-98
Identity = 205/402 (51.00%), Postives = 250/402 (62.19%), Query Frame = 0
Query:    1 MKGEIPDPVGVLVSLASRIVSLGLPRASGHLFLVGQLLTDTSHDPALATILGRACMGNDNAPGD--------GDGSGAR------GCSADTDGVGH-FRGFTLFLAAHCTSTSCPDHVKSDLMYVAMELLDCCTAA---AGVDTQSSSLSP--GSDPFVCVMLAIPRLLSQGYAGDEPLQLHSVAYLAAAVTYCRQRTGLGAPGWCSNAVGVPQVLEDLLTGRRKGRDSQVTSYEIVPLGSG---THRSSSGG-LCTTLKALLMTSSYRVRSATARLVASLC-----GASSPVEPANHDDVIGGSIDDVERFFRETLLAAGATDFLFEAIKTEREGTVRHYLEATEALALSPANFFHASNFSIKFATNVLLGALRGQESSGGASKCWGEFEDRKACSNEDED 373
            +K E+PDPV VL SL S  VSLGLPRASGHL+LVG+LL + S+D ALA  LG +C G  +  G         GD SG        G   +T   G   RGF  FLAA   STSC DH KSD+++VA+ELLDCCTA    AG+  Q   + P  G DPFV +MLA+PRLL++  + DE LQLH +AYLA    YCRQRT +G PGW SN  GVP VL +L  G R     + T  E++P G G   + +S SGG LC+TLK LLM+SSYRVRSATARL+ SLC     G  S  E A+ +  +G   +    FFRE LLAAG+TDFLFEAIK+EREG+ R+YLEA +A A SP  FFHA NF +KFA  +LL A RG       + C  E  DR   S  D++
Sbjct:   24 LKDELPDPVAVLTSLISSTVSLGLPRASGHLYLVGKLLANASYDRALAATLGNSCFGRRDGHGQRQQQTLVIGDRSGQGIVPSHGGSGVETRDEGEELRGFGAFLAAQALSTSCSDHTKSDVLFVALELLDCCTAVCMGAGIAPQGPLMPPPPGGDPFVSIMLALPRLLARRSSSDELLQLHGIAYLATVARYCRQRTEMGVPGWSSNRDGVPDVLAELFEGAR-----EATPREVLPTGGGGEGSKQSFSGGMLCSTLKTLLMSSSYRVRSATARLITSLCRDVPFGEDS--ELAHENAAMGSRRNGSSLFFREILLAAGSTDFLFEAIKSEREGSTRYYLEAADAFASSPVEFFHADNFCMKFAAPILLDAFRG------GTACGPEPYDRAGGSRSDDE 412          
BLAST of mRNA_H-elongata_contig16211.3950.1 vs. uniprot
Match: D8LNY5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNY5_ECTSI)

HSP 1 Score: 226 bits (575), Expect = 6.480e-60
Identity = 190/548 (34.67%), Postives = 267/548 (48.72%), Query Frame = 0
Query:  523 VLQVHRVMESLFLLVAQKWAGSLGHPGPKHAACMRTTVRGVS-------------------NGGIAFEEALRLTDIVFCAYERTLVYQHALADRSKDNTHVIAFVACMGVAVDTASMVLRNRLLRIP--------SDNNERA--HALRVRPSFIQESELTKLPQGDNDLHMMKDGVLHFFKEARVGDVAYSDEDHARAERKNSVESAASASTSCLDTILITAIKGDMISWILALYARCSDTPSHYSGEGKVENAPADSTALYRIPERLTGDNAECRATARYVLAEALKSMLHAQGWVNGLHANEVNEGLSLAKKGAVDDGKIDSLSDNIMGCAMTSKRDALGIALRSW--RNSCGENDETTSLDHHALSLLGTSVDNGNVCKLV---------------VLLISLSPSYLGVLHPHPGCRVDSASKLLRFVKTVSEAVFILNMFSYAI---------------SSRATEDIARFSPLPPALAAAVADLLARFPVAELATSSIPLSSMTISTIVRADGAAFVADWLVACPLLRIRRAMQGLGLPDELRG 1009
            VLQ  RV ESL L  A++W  S G           +TV G S                     G   EE++ L D+VF +YERTL YQ  L  +S++ TH +A+++C+G AVD  S VL ++  R          S N        L VRPSF+   EL +   G +               A  G V   +++++ A  + S+ +      SCL+TIL   ++ D++SW+L LYA+C    S  SG          +T   +  ER +       AT   +L E L+S+L AQGWVNG+ A+  +      + G    G+  ++ + +             + L+SW  R   G  +    LD H +S LG   DNG++CKLV               VLL+S+SPS+LGVLHPH GCR+DSA  LLR++KT+ EAVF LN+FS+ +               SSR +ED          L+AAV DLLARF V E+A S IPLS+  IS  + A   AFV++WLVA PL R++RA+   G   E +G
Sbjct:   24 VLQCARVYESL-LHTAEEWVSSQG-----------STVGGTSCQASAXXXXXXXXXXXXXXRRGFRGEESVGLADLVFSSYERTLSYQCNLIAQSENLTHDVAWLSCLGAAVDATSAVLFHKRRREEAAARGGRTSKNGTMGSWQLLNVRPSFVNTQELDRDCSGGSG--------------ASGGAVGGGEQEYSIAPGEVSIPA------SCLETILKVVVEADVVSWMLDLYAQCGGDTS--SG--------GTTTHSSQSSERSSDVVDAHGATTCALLMEVLQSLLDAQGWVNGVCAHGADRPSYEMECG----GRGPTIGETVR------------LMLQSWTTRGVSGAEEVHMPLDQHVMSQLGKRADNGDLCKLVWWYRGRYNRVEAKQKVLLVSVSPSFLGVLHPHVGCRIDSAVTLLRYIKTLPEAVFCLNLFSHIVLVEGDKIDGGRGGELSSRLSED----------LSAAVKDLLARFSVEEVALSLIPLSASAISFALLAGCEAFVSNWLVAAPLARVKRALTEFGAFCERQG 503          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16211.3950.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KK87_9PHAE1.320e-13433.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNY6_ECTSI2.390e-9851.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNY5_ECTSI6.480e-6034.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..1223
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1242..1640
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1224..1241

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16211contigH-elongata_contig16211:399..6821 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16211.3950.1mRNA_H-elongata_contig16211.3950.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16211 399..6821 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16211.3950.1 ID=prot_H-elongata_contig16211.3950.1|Name=mRNA_H-elongata_contig16211.3950.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1640bp
MKGEIPDPVGVLVSLASRIVSLGLPRASGHLFLVGQLLTDTSHDPALATI
LGRACMGNDNAPGDGDGSGARGCSADTDGVGHFRGFTLFLAAHCTSTSCP
DHVKSDLMYVAMELLDCCTAAAGVDTQSSSLSPGSDPFVCVMLAIPRLLS
QGYAGDEPLQLHSVAYLAAAVTYCRQRTGLGAPGWCSNAVGVPQVLEDLL
TGRRKGRDSQVTSYEIVPLGSGTHRSSSGGLCTTLKALLMTSSYRVRSAT
ARLVASLCGASSPVEPANHDDVIGGSIDDVERFFRETLLAAGATDFLFEA
IKTEREGTVRHYLEATEALALSPANFFHASNFSIKFATNVLLGALRGQES
SGGASKCWGEFEDRKACSNEDEDKARVFEASSRLLLQALVTSPPSSSTGV
VEELFAMVTSEAQAADTDNKNRAIGVAADVLCLIASGDITLAKDWSIFLE
AVESLLDHIELDLIATARGSNPQADSSNYLPEERSPPIITSSDHRGFSAL
PGQEDSGGGGGGDGGGGDIDLFVLQVHRVMESLFLLVAQKWAGSLGHPGP
KHAACMRTTVRGVSNGGIAFEEALRLTDIVFCAYERTLVYQHALADRSKD
NTHVIAFVACMGVAVDTASMVLRNRLLRIPSDNNERAHALRVRPSFIQES
ELTKLPQGDNDLHMMKDGVLHFFKEARVGDVAYSDEDHARAERKNSVESA
ASASTSCLDTILITAIKGDMISWILALYARCSDTPSHYSGEGKVENAPAD
STALYRIPERLTGDNAECRATARYVLAEALKSMLHAQGWVNGLHANEVNE
GLSLAKKGAVDDGKIDSLSDNIMGCAMTSKRDALGIALRSWRNSCGENDE
TTSLDHHALSLLGTSVDNGNVCKLVVLLISLSPSYLGVLHPHPGCRVDSA
SKLLRFVKTVSEAVFILNMFSYAISSRATEDIARFSPLPPALAAAVADLL
ARFPVAELATSSIPLSSMTISTIVRADGAAFVADWLVACPLLRIRRAMQG
LGLPDELRGNENGGRVACLSAASCDDCDRRALTGVLEAVVGRWSAELSNG
LQHSRAEATILRLSSVLLLSPDTFFDLVFTSRHSCLEEGPEAQYKTRATS
AQSLGIVIVDTLGEISSALSSVMLRRSEDDITKYDRASKLMCAFQVLQLA
SAFLDVGCIHGHYASLAANRDNFTPACTPISHRLPLEFAFARACGGLLRG
LLDPHRSQCGNSEAGICEDGSRDSVLFCALNLFSALIVLSGSRADLRQSK
HDWTLAFEDAHGAIYDVLHSPDMVVDKLGNWVDSAPEMLASFLQVCAIWN
VIFSPSGVKVSGGTRLDPPFEVLAEVLRLGCQGPRDMKNTAQRTGRLLKK
RRFHTREKGSCVLLQLFAARCVESMAPTKPFSKREVQVLQLSLQDTACID
DAVLTSAALGAIRTLWEAYFGFLQMNELVGQSWNSFVIESCLDTALRLLM
TRKDNSTAVDGLLGPGAMGFWADFCLGEGSSQRFGINAAMILSAVGRLVS
SSVGKSFPRLRAAIVPDCRSVEVLSLRSLTCVQQCAIFISKELRMTMETW
SVHASHGAEDCIDERYAERGVQPRRRVGRRLENDLDLVTFHLSDALAQLL
GVLKYIEMPPPRGTRIPGTLRKEVVDALSQVRSTLASSLE
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