prot_H-elongata_contig16167.3935.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16167.3935.1
Unique Nameprot_H-elongata_contig16167.3935.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length393
Homology
BLAST of mRNA_H-elongata_contig16167.3935.1 vs. uniprot
Match: A0A2I6U1M4_SACJA (Tic20-like protein n=15 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1M4_SACJA)

HSP 1 Score: 369 bits (947), Expect = 2.290e-122
Identity = 216/408 (52.94%), Postives = 280/408 (68.63%), Query Frame = 0
Query:    1 MVSITTSMVFLFAPMLGPTTAFVS-----SPLSFPSTRRPQFCSTSSRPSSMRTVFCI---VSGDTDADSSAERRVTELRERAAAFRAQAAALEDQRALERRANADRSFKSFA--KDGVVGMTELQAGLEGSLKKTFIQQLAVRMGRKPSPAEINEKIAELPGGCLFPDDLARRLVDVYDQDGDGLLLQSEFAPVEELRARLESMFRERREEQLEARKKEXXXXXXGKRIAEESR-------LGGSNDATATATERALCALPYLLPFSDGIVYARHLYETFPQQLEWTEPLAVAMIFYRNLPFATLAAFFGMSLLASSPQVNKLLRFNLIQAINLDIALIVPSLVGPLARWSLGDDAYKLVPITNALSDVLFVALLVAIVYSVATSAMGTFPNKLPLFGPINRENPDK 391
            M   T+S++ L A +LG TTAFV+     +  S PS ++    +  +R +  R+  C+    +G +     A+ +   LRE AAAFRAQAA LED+R  ER+A A+RSF SF   +DG V + EL+AGLEG L+++F++QL  RMGRKP   EI+ +IA LPGG LFPDDLAR+L+D YDQ+GDGLL +SEFAP EELR RLE+MFR+++E   +AR +E       K  AE           GG ND  ATA ++AL ALPYLLP  DGI +A HL+  FP+Q  W +PLA  ++  R+LPFATL  FF +S L+ +PQVNKL+RFN+ QAINLDIALIVP ++G LA  SLG DAYKLVP+  A SDV+FVA+L A+ YSV TS+ G+FPNKLPL G +NRENPD+
Sbjct:    1 MAPFTSSIIPLLALLLGSTTAFVTPTGRGASWSLPSVQQSSTFTAVARQAIRRSSPCLSMMATGTSSEVEVAQEKAARLRETAAAFRAQAAELEDKRTQERQAGAERSFNSFDSNQDGAVDIVELKAGLEGPLRRSFVKQLTARMGRKPDREEIDARIAALPGGSLFPDDLARKLIDTYDQNGDGLLQRSEFAPTEELRTRLENMFRDQQETARQARVEERQRQMEDKLAAEVGTGAGAVVPAGGVNDGPATAADKALSALPYLLPLVDGISFAGHLFGAFPEQTAWAQPLAAVLLALRSLPFATLVGFFSLSALSGNPQVNKLVRFNMQQAINLDIALIVPGVLGALASVSLGQDAYKLVPLAEAGSDVVFVAMLAAVAYSVVTSSTGSFPNKLPLLGRLNRENPDR 408          
BLAST of mRNA_H-elongata_contig16167.3935.1 vs. uniprot
Match: A0A6H5JY95_9PHAE (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY95_9PHAE)

HSP 1 Score: 357 bits (915), Expect = 1.170e-117
Identity = 186/303 (61.39%), Postives = 227/303 (74.92%), Query Frame = 0
Query:   97 ADRSFKSFA--KDGVVGMTELQAGLEGSLKKTFIQQLAVRMGRKPSPAEINEKIAELPGGCLFPDDLARRLVDVYDQDGDGLLLQSEFAPVEELRARLESMFRERREEQLEARKKEXXXXXXGKRIAEESRLGGSND-----ATATATERALCALPYLLPFSDGIVYARHLYETFPQQLEWTEPLAVAMIFYRNLPFATLAAFFGMSLLASSPQVNKLLRFNLIQAINLDIALIVPSLVGPLARWSLGDDAYKLVPITNALSDVLFVALLVAIVYSVATSAMGTFPNKLPLFGPINRENPDKS 392
            ADRSF +F   KDG VG+ EL+AGLEG LKKTF +QL  RMGRKP+P E+  KI ELPG  LFPDDLA RL+ +YDQ+GDG+L QSEFAP EELRARLES+FRERREE+LEAR+ E       K   +   L    D     A+AT+ E+ALCALPY+LP SDGIVYA+H+Y TFPQQ+ W+EPL   +I   NLPFATL AFFGMS+L+S+  +NKLLRFN++QAIN DIALIVPS+ GPL  WSLG DAYK+ P+T+  +D+L V+L++A+ YS+A SA G  PNK+P FG INR   D S
Sbjct:  102 ADRSFAAFDSNKDGAVGVAELKAGLEGPLKKTFTKQLTARMGRKPTPEEVEAKILELPGRALFPDDLAERLIKLYDQNGDGVLQQSEFAPTEELRARLESIFRERREEELEARQAERKREMDAKTTGKGKMLSSVADSDREAASATSLEKALCALPYILPLSDGIVYAQHIYSTFPQQMAWSEPLVAILIAVNNLPFATLVAFFGMSILSSNQNINKLLRFNMLQAINFDIALIVPSVFGPLLTWSLGSDAYKISPVTDIATDILSVSLVLAVAYSIAASATGAIPNKIPFFGKINRVTRDDS 404          
BLAST of mRNA_H-elongata_contig16167.3935.1 vs. uniprot
Match: D8LS19_ECTSI (EF-hand domain-containing protein n=7 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS19_ECTSI)

HSP 1 Score: 341 bits (875), Expect = 1.720e-111
Identity = 191/333 (57.36%), Postives = 247/333 (74.17%), Query Frame = 0
Query:   64 AERRVTELRERAAAFRAQAAALEDQRALERRANADRSFKSFA--KDGVVGMTELQAGLEGSLKKTFIQQLAVRMGRKPSPAEINEKIAELPGGCLFPDDLARRLVDVYDQDGDGLLLQSEFAPVEELRARLESMFRERREEQLEARKKEXXXXXXGKRIAEESRL----GGSNDATATATERALCALPYLLPFSDGIVYARHLYETFPQQLEWTEPLAVAMIFYRNLPFATLAAFFGMSLLASSPQVNKLLRFNLIQAINLDIALIVPSLVGPLARWSLGDDAYKLVPITNALSDVLFVALLVAIVYSVATSAMGTFPNKLPLFGPINRENPD 390
            AE+R  +LRE AAAFRA+AA LE ++A ERR NA RSF +F   KDG V + EL+AGLEG L+++F + L  RMGRKPS  E++++IA LPGG LFPDDLA +L+  YDQ+GDGLL QSEFAP EELR RLE++F ++REE+  AR + XXXXXX +   +   +    G  ND  AT  ++AL ALPY+LP +DG+V+A HL+  FP+Q  W +PLA  ++  R++PFATL  FF +S+ +S+PQ+NKL+RFN+ QAINLDIALI+P +VG +    LG DA KL P+ NA SDV+FVALL A+ YSV TSA G+FPNKLPL G +NRENPD
Sbjct:   74 AEQRAAKLRETAAAFRAEAAELEQKQARERRENAQRSFNTFDSNKDGSVDVAELKAGLEGPLRRSFTKTLQARMGRKPSKEEVDDRIAGLPGGTLFPDDLALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXDRMRPDAGTVVVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLIGFFSLSIWSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANASSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPD 406          
BLAST of mRNA_H-elongata_contig16167.3935.1 vs. uniprot
Match: D7FRG5_ECTSI (EF-hand domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG5_ECTSI)

HSP 1 Score: 293 bits (749), Expect = 1.070e-92
Identity = 167/315 (53.02%), Postives = 218/315 (69.21%), Query Frame = 0
Query:   64 AERRVTELRERAAAFRAQAAALEDQRALERRANADRSFKSFA--KDGVVGMTELQAGLEGSLKKTFIQQLAVRMGRKPSPAEINEKIAELPGGCLFPDDLARRLVDVYDQDGDGLLLQSEFAPVEELRARLESMFRERREEQLEARKKEXXXXXXGKRIAEESRL----GGSNDATATATERALCALPYLLPFSDGIVYARHLYETFPQQLEWTEPLAVAMIFYRNLPFATLAAFFGMSLLASSPQVNKLLRFNLIQAINLDIALIVPSLVGPLARWSLGDDAYKLVPITNALSDVLFVALLVAIVYSVATSAMG 372
            AE++  +LRE AAAFRA+        A ERR NA RSF +F   KDG V + EL+AGLE  L+++F + L  RMGRKPS  E++E+IA LPGG LFPD+LA +L+  YDQ+GDGLL QSEFAP EELR RLE++  ++RE++  AR +E       K   +   +    G  ND  AT  ++AL ALPYLLP  DGI++A HL+  FP+Q  W +PLA  ++  R+LPFATL  FF +S+ +S+P+VNKL+RFN+ QAINLDIALI+P +VG +    LG DA KL P++NA SDV+FVALL A+ YSV TSA G
Sbjct:   74 AEQKAAKLRETAAAFRAEXXXXXXXXARERRENALRSFNTFDSNKDGSVDIAELKAGLESPLRRSFTKTLQARMGRKPSKEEVDERIAGLPGGTLFPDELALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLLSQQREDERLARLEERQRQMDDKMRPDTGAVVVSPGDVNDGPATTADKALSALPYLLPLVDGILFAAHLFGAFPEQTAWAQPLAAVLLALRSLPFATLIGFFSLSIGSSNPRVNKLVRFNMQQAINLDIALILPGVVGAITGGMLGADAVKLAPLSNAGSDVVFVALLAAVAYSVGTSATG 388          
BLAST of mRNA_H-elongata_contig16167.3935.1 vs. uniprot
Match: D8LS20_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS20_ECTSI)

HSP 1 Score: 265 bits (678), Expect = 5.040e-82
Identity = 151/272 (55.51%), Postives = 201/272 (73.90%), Query Frame = 0
Query:   64 AERRVTELRERAAAFRAQAAALEDQRALERRANADRSFKSFA--KDGVVGMTELQAGLEGSLKKTFIQQLAVRMGRKPSPAEINEKIAELPGGCLFPDDLARRLVDVYDQDGDGLLLQSEFAPVEELRARLESMFRERREEQLEARKKEXXXXXXGKRIAEESRL----GGSNDATATATERALCALPYLLPFSDGIVYARHLYETFPQQLEWTEPLAVAMIFYRNLPFATLAAFFGMSLLASSPQVNKLLRFNLIQAINLDIALIVPSLVG 329
            AE+R  +LRE AAAFRA+AA LE ++A ERR NA RSF +F   KDG V + EL+AGLEG L+++F + L  RMGRKPS  E++++IA LPGG LFPDDLA +L+  YDQ+GDGLL QSEFAP EELR RLE++F ++REE+  AR + XXXXXX +   +   +    G  ND  AT  ++AL ALPY+LP +DG+V+A HL+  F +Q  W +PLA  ++  R++PFATL  FF +S+ +S+PQ+NKL+RFN+ QAINLDIALI+P +VG
Sbjct:   74 AEQRAAKLRETAAAFRAEAAELEQKQARERRENAQRSFNTFDSNKDGSVDVAELKAGLEGPLRRSFTKTLQARMGRKPSKEEVDDRIAGLPGGTLFPDDLALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXDRMRPDAGTVVVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFLEQTAWAQPLAAVLLALRSVPFATLIGFFSLSIGSSNPQINKLVRFNMQQAINLDIALILPGVVG 345          
BLAST of mRNA_H-elongata_contig16167.3935.1 vs. uniprot
Match: D8LTM8_ECTSI (TIC 20 related, plastid import n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTM8_ECTSI)

HSP 1 Score: 251 bits (642), Expect = 3.490e-76
Identity = 145/336 (43.15%), Postives = 213/336 (63.39%), Query Frame = 0
Query:   64 AERRVTELRERAAAFRAQAAALEDQRALERRANADRSFKSFAK--DGVVGMTELQAGLEGSLKKTFIQQLAVRMGRKPSPAEINEKIAELPGGCLFPDDLARRLVDVYDQDGDGLLLQSEFAPVEELRARLESMFRERREE-QLEA---RKKEXXXXXXGKRIAEESRLGGS-----NDATATATERALCALPYLLPFSDGIVYARHLYETFPQQLEWTEPLAVAMIFYRNLPFATLAAFFGMSLLASSPQVNKLLRFNLIQAINLDIALIVPSLVGPLARWSLGDDAYKLVPITNALSDVLFVALLVAIVYSVATSAMGTFPNKLPLFGPINREN 388
            A  +  +LR  AA  R QA  LE +R  E++  A  +F SF    DG V + EL AGLEG L+K FI+++   M RKPSPAE++E+I+E+PGG L P +LA++L++ YD +GDG+L  SEFA   ++R RL+S+F +R +E +LEA   R++E       K   E    G +     ND   T T++ L  LPY LP  D +V+  H+++TFP QL + EPL   ++ YR+LPF+ L  FFG+   A+ P+VNKL+RFNL QA+ LDIA+  PS+   +    LG+D+ KL P+    +DV+FV ++  ++YS+A+SA+G  P  LP+ G +NRE+
Sbjct:   84 AAEKAAKLRAFAAELRLQAEELESKRDSEKQQAAQEAFDSFDTNDDGTVDVKELIAGLEGQLRKDFIKRMTKTMKRKPSPAEVDERISEMPGGSLLPMELAQKLIESYDTNGDGVLQPSEFASKADMRVRLDSLFADRAQEARLEAAAAREREIENRGADKARQEAKARGLALPEDFNDGPPTITDKLLSVLPYTLPLMDSLVFGAHIFQTFPTQLSFLEPLVAILLIYRSLPFSGLILFFGLQWFAAKPEVNKLVRFNLRQAVILDIAMFFPSIFAFIITSVLGEDSAKLAPLATVCNDVIFVTVVACVLYSIASSAIGVLPESLPILGKMNRES 419          
BLAST of mRNA_H-elongata_contig16167.3935.1 vs. uniprot
Match: A0A6H5KUU9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU9_9PHAE)

HSP 1 Score: 236 bits (603), Expect = 2.040e-72
Identity = 148/281 (52.67%), Postives = 187/281 (66.55%), Query Frame = 0
Query:  115 LQAGLEGSLKKTF-IQQLAVRMGRKPSPAEINEKIAELPGGCLFPDDLARRLVDVYDQDGDGLLLQSEFAPVEELRARLESMFRERREEQLEARKKEXXXXXXGKRI----AEESRLGGSNDATATATERALCALPYLLPFSDGIVYARHLYETFPQQLEWTEPLAVAMIFYRNLPFATLAAFFGMSLLASSPQVNKLLRFNLIQAINLDIALIVPSLVGPLARWSLGDDAYKLVPITNALSDVLFVALLVAIVYSVATSAMGTFPNKLPLFGPINRENPD 390
            L  G +G+  KT  IQ+  VR   K  P         LP   +     A  LV  YDQ+GDGLL QSEFAP EELR RLE++F ++REE+  AR + XXXXXX K      A E   G  ND  AT  ++AL ALPY+LP +DG+V+A HL+  FP+Q  W +PLA  ++  R++PFATL  FF +S+ +S+PQ+NKL+RFN+ QAINLDIALI+P +VG +    LG DA KL P+ NA SDV+FVALL A+ YSV TSA G+FPNKLPL G +NRENPD
Sbjct:    2 LCVGGDGNAPKTSRIQRFRVRSSSKSCP---------LPARFVK----AGVLVRSYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXXKMRPDAGAVEVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLVGFFSLSVGSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPD 269          
BLAST of mRNA_H-elongata_contig16167.3935.1 vs. uniprot
Match: A0A6H5JBJ0_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ0_9PHAE)

HSP 1 Score: 230 bits (587), Expect = 1.340e-69
Identity = 137/286 (47.90%), Postives = 177/286 (61.89%), Query Frame = 0
Query:  106 KDGVVGMTELQAGLEGSLKKTFIQQLAVRMGRKPSPAEINEKIAELPGGCLFPDDLARRLVDVYDQDGDGLLLQSEFAPVEELRARLESMFRERREEQLEARKKEXXXXXXGKRIAEESRLGGSNDATATATERALCALPYLLPFSDGIVYARHLYETFPQQLEWTEPLAVAMIFYRNLPFATLAAFFGMSL-LASSPQVNKLLRFNLIQAINLDIALIVPSLVGPLARWSLGDDAYKLVPITNALSDVLFVALLVAIVYSVATSAMGTFPNKLPLFGPINRENPD 390
            KDG V + EL+AGLE  L++   + L  RMGRKPS  E++E+IA LPGG LFPD+LA +L+  YDQ+GDGLL  SEFAP EELR RLE +F ++RE++  AR +E       K                            + P +  +V A            W +PLA  ++  R++PFATL  FF +S+    +PQVNKL+RFN  QAIN+DIALI+P +VG +A   LG DA KL P+ NA SDV+FVALL A+ YSV TSA G+FPNKLPL G +NRENP+
Sbjct:   54 KDGSVDIAELKAGLESPLRRGLTKTLQARMGRKPSKEEVDERIAGLPGGTLFPDELALKLIQTYDQNGDGLLQLSEFAPTEELRTRLEDLFSQQREDERVARMEERQRRMDDK----------------------------MRPDTGAVVTA------------WAQPLAAVLLALRSVPFATLIGFFSLSVHRLRNPQVNKLVRFNTQQAINVDIALILPGVVGAIAGAVLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPE 299          
BLAST of mRNA_H-elongata_contig16167.3935.1 vs. uniprot
Match: A0A6H5KVD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVD7_9PHAE)

HSP 1 Score: 194 bits (492), Expect = 6.520e-57
Identity = 96/164 (58.54%), Postives = 123/164 (75.00%), Query Frame = 0
Query:  227 GGSNDATATATERALCALPYLLPFSDGIVYARHLYETFPQQLEWTEPLAVAMIFYRNLPFATLAAFFGMSLLASSPQVNKLLRFNLIQAINLDIALIVPSLVGPLARWSLGDDAYKLVPITNALSDVLFVALLVAIVYSVATSAMGTFPNKLPLFGPINRENPD 390
            G  ND  AT  ++AL ALPY+LP +DG+V+A HL+  FP+Q  W EPL   ++  R++PFATL  FF +S+ +S+PQ+NKL+RFN+ QAINLDIALI+P +VG +    LG DA KL P+ NA SDV+FVALL A+ YSV TSA G+FPNKLPL G +NRENPD
Sbjct:   24 GDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAEPLVAVLLALRSVPFATLIGFFSLSVGSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPD 187          
BLAST of mRNA_H-elongata_contig16167.3935.1 vs. uniprot
Match: A0A6H5KCI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI4_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 5.450e-56
Identity = 115/249 (46.18%), Postives = 146/249 (58.63%), Query Frame = 0
Query:  145 NEKIAELPGGCLFPDDLARRLVDVYDQDGDGLLLQSEFAPVEELRARLESMFRERREEQLEARKKEXXXXXXGKRIAEESRL----GGSNDATATATERALCALPYLLPFSDGIVYARHLYETFPQQLEWTEPLAVAMIFYRNLPFATLAAFFGMSLLASSPQVNKLLRFNLIQAINLDIALIVPSLVGPLARWSLGDDAYKLVPITNALSDVLFVALLVAIVYSVATSAMGTFPNKLPLFGPINRENP 389
            +E+IA LPGG LFPD+LA +L+  YD +G+GLL QSEFAP EELR RLE++F ++REE+  AR +E           +   +    G  ND      + AL ALPYLLP +DGIV+A HL+  FP+Q  W +PLA A                                      IN+DIALI+P +VG +A   LG DA KL P+ NA SDV+FVALL A+ YSV TSA G+FP+KLPL G +NRENP
Sbjct:   21 DERIAGLPGGTLFPDELALKLIQTYDHNGNGLLQQSEFAPTEELRTRLENLFSQQREEKRLARMEERQRQMDDNMRPDAGAVVVSPGDVNDGLVNTADNALSALPYLLPLADGIVFAAHLFGVFPEQTAWAQPLAAA--------------------------------------INVDIALILPGVVGAIAGAVLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPSKLPLLGRLNRENP 231          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16167.3935.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2I6U1M4_SACJA2.290e-12252.94Tic20-like protein n=15 Tax=Saccharina japonica Ta... [more]
A0A6H5JY95_9PHAE1.170e-11761.39EF-hand domain-containing protein n=2 Tax=Ectocarp... [more]
D8LS19_ECTSI1.720e-11157.36EF-hand domain-containing protein n=7 Tax=Ectocarp... [more]
D7FRG5_ECTSI1.070e-9253.02EF-hand domain-containing protein n=2 Tax=Ectocarp... [more]
D8LS20_ECTSI5.040e-8255.51EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D8LTM8_ECTSI3.490e-7643.15TIC 20 related, plastid import n=2 Tax=Ectocarpus ... [more]
A0A6H5KUU9_9PHAE2.040e-7252.67Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBJ0_9PHAE1.340e-6947.90EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KVD7_9PHAE6.520e-5758.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCI4_9PHAE5.450e-5646.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 185..221
NoneNo IPR availableCOILSCoilCoilcoord: 68..88
NoneNo IPR availablePANTHERPTHR33510:SF5PROTEIN TIC 20-II, CHLOROPLASTICcoord: 182..380
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 368..392
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 310..329
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 349..367
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 274..298
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..273
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 330..348
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..21
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 299..309
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.636
NoneNo IPR availableTMHMMTMhelixcoord: 278..300
NoneNo IPR availableTMHMMTMhelixcoord: 344..366
NoneNo IPR availableTMHMMTMhelixcoord: 307..329
IPR005691Chloroplast protein import component Tic20PFAMPF16166TIC20coord: 239..380
e-value: 3.5E-12
score: 46.5
IPR005691Chloroplast protein import component Tic20PANTHERPTHR33510FAMILY NOT NAMEDcoord: 182..380

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16167contigH-elongata_contig16167:5241..6419 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16167.3935.1mRNA_H-elongata_contig16167.3935.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16167 5241..6419 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16167.3935.1 ID=prot_H-elongata_contig16167.3935.1|Name=mRNA_H-elongata_contig16167.3935.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=393bp
MVSITTSMVFLFAPMLGPTTAFVSSPLSFPSTRRPQFCSTSSRPSSMRTV
FCIVSGDTDADSSAERRVTELRERAAAFRAQAAALEDQRALERRANADRS
FKSFAKDGVVGMTELQAGLEGSLKKTFIQQLAVRMGRKPSPAEINEKIAE
LPGGCLFPDDLARRLVDVYDQDGDGLLLQSEFAPVEELRARLESMFRERR
EEQLEARKKERERELEGKRIAEESRLGGSNDATATATERALCALPYLLPF
SDGIVYARHLYETFPQQLEWTEPLAVAMIFYRNLPFATLAAFFGMSLLAS
SPQVNKLLRFNLIQAINLDIALIVPSLVGPLARWSLGDDAYKLVPITNAL
SDVLFVALLVAIVYSVATSAMGTFPNKLPLFGPINRENPDKS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005691Tic20