mRNA_H-elongata_contig16167.3935.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig16167.3935.1
Unique NamemRNA_H-elongata_contig16167.3935.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig16167.3935.1 vs. uniprot
Match: A0A2I6U1M4_SACJA (Tic20-like protein n=15 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1M4_SACJA)

HSP 1 Score: 369 bits (947), Expect = 2.290e-122
Identity = 216/408 (52.94%), Postives = 280/408 (68.63%), Query Frame = 1
Query:    1 MVSITTSMVFLFAPMLGPTTAFVS-----SPLSFPSTRRPQFCSTSSRPSSMRTVFCI---VSGDTDADSSAERRVTELRERAAAFRAQAAALEDQRALERRANADRSFKSFA--KDGVVGMTELQAGLEGSLKKTFIQQLAVRMGRKPSPAEINEKIAELPGGCLFPDDLARRLVDVYDQDGDGLLLQSEFAPVEELRARLESMFRERREEQLEARKKEXXXXXXGKRIAEESR-------LGGSNDATATATERALCALPYLLPFSDGIVYARHLYETFPQQLEWTEPLAVAMIFYRNLPFATLAAFFGMSLLASSPQVNKLLRFNLIQAINLDIALIVPSLVGPLARWSLGDDAYKLVPITNALSDVLFVALLVAIVYSVATSAMGTFPNKLPLFGPINRENPDK 1173
            M   T+S++ L A +LG TTAFV+     +  S PS ++    +  +R +  R+  C+    +G +     A+ +   LRE AAAFRAQAA LED+R  ER+A A+RSF SF   +DG V + EL+AGLEG L+++F++QL  RMGRKP   EI+ +IA LPGG LFPDDLAR+L+D YDQ+GDGLL +SEFAP EELR RLE+MFR+++E   +AR +E       K  AE           GG ND  ATA ++AL ALPYLLP  DGI +A HL+  FP+Q  W +PLA  ++  R+LPFATL  FF +S L+ +PQVNKL+RFN+ QAINLDIALIVP ++G LA  SLG DAYKLVP+  A SDV+FVA+L A+ YSV TS+ G+FPNKLPL G +NRENPD+
Sbjct:    1 MAPFTSSIIPLLALLLGSTTAFVTPTGRGASWSLPSVQQSSTFTAVARQAIRRSSPCLSMMATGTSSEVEVAQEKAARLRETAAAFRAQAAELEDKRTQERQAGAERSFNSFDSNQDGAVDIVELKAGLEGPLRRSFVKQLTARMGRKPDREEIDARIAALPGGSLFPDDLARKLIDTYDQNGDGLLQRSEFAPTEELRTRLENMFRDQQETARQARVEERQRQMEDKLAAEVGTGAGAVVPAGGVNDGPATAADKALSALPYLLPLVDGISFAGHLFGAFPEQTAWAQPLAAVLLALRSLPFATLVGFFSLSALSGNPQVNKLVRFNMQQAINLDIALIVPGVLGALASVSLGQDAYKLVPLAEAGSDVVFVAMLAAVAYSVVTSSTGSFPNKLPLLGRLNRENPDR 408          
BLAST of mRNA_H-elongata_contig16167.3935.1 vs. uniprot
Match: A0A6H5JY95_9PHAE (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY95_9PHAE)

HSP 1 Score: 357 bits (915), Expect = 1.170e-117
Identity = 186/303 (61.39%), Postives = 227/303 (74.92%), Query Frame = 1
Query:  289 ADRSFKSFA--KDGVVGMTELQAGLEGSLKKTFIQQLAVRMGRKPSPAEINEKIAELPGGCLFPDDLARRLVDVYDQDGDGLLLQSEFAPVEELRARLESMFRERREEQLEARKKEXXXXXXGKRIAEESRLGGSND-----ATATATERALCALPYLLPFSDGIVYARHLYETFPQQLEWTEPLAVAMIFYRNLPFATLAAFFGMSLLASSPQVNKLLRFNLIQAINLDIALIVPSLVGPLARWSLGDDAYKLVPITNALSDVLFVALLVAIVYSVATSAMGTFPNKLPLFGPINRENPDKS 1176
            ADRSF +F   KDG VG+ EL+AGLEG LKKTF +QL  RMGRKP+P E+  KI ELPG  LFPDDLA RL+ +YDQ+GDG+L QSEFAP EELRARLES+FRERREE+LEAR+ E       K   +   L    D     A+AT+ E+ALCALPY+LP SDGIVYA+H+Y TFPQQ+ W+EPL   +I   NLPFATL AFFGMS+L+S+  +NKLLRFN++QAIN DIALIVPS+ GPL  WSLG DAYK+ P+T+  +D+L V+L++A+ YS+A SA G  PNK+P FG INR   D S
Sbjct:  102 ADRSFAAFDSNKDGAVGVAELKAGLEGPLKKTFTKQLTARMGRKPTPEEVEAKILELPGRALFPDDLAERLIKLYDQNGDGVLQQSEFAPTEELRARLESIFRERREEELEARQAERKREMDAKTTGKGKMLSSVADSDREAASATSLEKALCALPYILPLSDGIVYAQHIYSTFPQQMAWSEPLVAILIAVNNLPFATLVAFFGMSILSSNQNINKLLRFNMLQAINFDIALIVPSVFGPLLTWSLGSDAYKISPVTDIATDILSVSLVLAVAYSIAASATGAIPNKIPFFGKINRVTRDDS 404          
BLAST of mRNA_H-elongata_contig16167.3935.1 vs. uniprot
Match: D8LS19_ECTSI (EF-hand domain-containing protein n=7 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS19_ECTSI)

HSP 1 Score: 341 bits (875), Expect = 1.720e-111
Identity = 191/333 (57.36%), Postives = 247/333 (74.17%), Query Frame = 1
Query:  190 AERRVTELRERAAAFRAQAAALEDQRALERRANADRSFKSFA--KDGVVGMTELQAGLEGSLKKTFIQQLAVRMGRKPSPAEINEKIAELPGGCLFPDDLARRLVDVYDQDGDGLLLQSEFAPVEELRARLESMFRERREEQLEARKKEXXXXXXGKRIAEESRL----GGSNDATATATERALCALPYLLPFSDGIVYARHLYETFPQQLEWTEPLAVAMIFYRNLPFATLAAFFGMSLLASSPQVNKLLRFNLIQAINLDIALIVPSLVGPLARWSLGDDAYKLVPITNALSDVLFVALLVAIVYSVATSAMGTFPNKLPLFGPINRENPD 1170
            AE+R  +LRE AAAFRA+AA LE ++A ERR NA RSF +F   KDG V + EL+AGLEG L+++F + L  RMGRKPS  E++++IA LPGG LFPDDLA +L+  YDQ+GDGLL QSEFAP EELR RLE++F ++REE+  AR + XXXXXX +   +   +    G  ND  AT  ++AL ALPY+LP +DG+V+A HL+  FP+Q  W +PLA  ++  R++PFATL  FF +S+ +S+PQ+NKL+RFN+ QAINLDIALI+P +VG +    LG DA KL P+ NA SDV+FVALL A+ YSV TSA G+FPNKLPL G +NRENPD
Sbjct:   74 AEQRAAKLRETAAAFRAEAAELEQKQARERRENAQRSFNTFDSNKDGSVDVAELKAGLEGPLRRSFTKTLQARMGRKPSKEEVDDRIAGLPGGTLFPDDLALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXDRMRPDAGTVVVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLIGFFSLSIWSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANASSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPD 406          
BLAST of mRNA_H-elongata_contig16167.3935.1 vs. uniprot
Match: D7FRG5_ECTSI (EF-hand domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG5_ECTSI)

HSP 1 Score: 293 bits (749), Expect = 1.070e-92
Identity = 167/315 (53.02%), Postives = 218/315 (69.21%), Query Frame = 1
Query:  190 AERRVTELRERAAAFRAQAAALEDQRALERRANADRSFKSFA--KDGVVGMTELQAGLEGSLKKTFIQQLAVRMGRKPSPAEINEKIAELPGGCLFPDDLARRLVDVYDQDGDGLLLQSEFAPVEELRARLESMFRERREEQLEARKKEXXXXXXGKRIAEESRL----GGSNDATATATERALCALPYLLPFSDGIVYARHLYETFPQQLEWTEPLAVAMIFYRNLPFATLAAFFGMSLLASSPQVNKLLRFNLIQAINLDIALIVPSLVGPLARWSLGDDAYKLVPITNALSDVLFVALLVAIVYSVATSAMG 1116
            AE++  +LRE AAAFRA+        A ERR NA RSF +F   KDG V + EL+AGLE  L+++F + L  RMGRKPS  E++E+IA LPGG LFPD+LA +L+  YDQ+GDGLL QSEFAP EELR RLE++  ++RE++  AR +E       K   +   +    G  ND  AT  ++AL ALPYLLP  DGI++A HL+  FP+Q  W +PLA  ++  R+LPFATL  FF +S+ +S+P+VNKL+RFN+ QAINLDIALI+P +VG +    LG DA KL P++NA SDV+FVALL A+ YSV TSA G
Sbjct:   74 AEQKAAKLRETAAAFRAEXXXXXXXXARERRENALRSFNTFDSNKDGSVDIAELKAGLESPLRRSFTKTLQARMGRKPSKEEVDERIAGLPGGTLFPDELALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLLSQQREDERLARLEERQRQMDDKMRPDTGAVVVSPGDVNDGPATTADKALSALPYLLPLVDGILFAAHLFGAFPEQTAWAQPLAAVLLALRSLPFATLIGFFSLSIGSSNPRVNKLVRFNMQQAINLDIALILPGVVGAITGGMLGADAVKLAPLSNAGSDVVFVALLAAVAYSVGTSATG 388          
BLAST of mRNA_H-elongata_contig16167.3935.1 vs. uniprot
Match: D8LS20_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS20_ECTSI)

HSP 1 Score: 265 bits (678), Expect = 5.040e-82
Identity = 151/272 (55.51%), Postives = 201/272 (73.90%), Query Frame = 1
Query:  190 AERRVTELRERAAAFRAQAAALEDQRALERRANADRSFKSFA--KDGVVGMTELQAGLEGSLKKTFIQQLAVRMGRKPSPAEINEKIAELPGGCLFPDDLARRLVDVYDQDGDGLLLQSEFAPVEELRARLESMFRERREEQLEARKKEXXXXXXGKRIAEESRL----GGSNDATATATERALCALPYLLPFSDGIVYARHLYETFPQQLEWTEPLAVAMIFYRNLPFATLAAFFGMSLLASSPQVNKLLRFNLIQAINLDIALIVPSLVG 987
            AE+R  +LRE AAAFRA+AA LE ++A ERR NA RSF +F   KDG V + EL+AGLEG L+++F + L  RMGRKPS  E++++IA LPGG LFPDDLA +L+  YDQ+GDGLL QSEFAP EELR RLE++F ++REE+  AR + XXXXXX +   +   +    G  ND  AT  ++AL ALPY+LP +DG+V+A HL+  F +Q  W +PLA  ++  R++PFATL  FF +S+ +S+PQ+NKL+RFN+ QAINLDIALI+P +VG
Sbjct:   74 AEQRAAKLRETAAAFRAEAAELEQKQARERRENAQRSFNTFDSNKDGSVDVAELKAGLEGPLRRSFTKTLQARMGRKPSKEEVDDRIAGLPGGTLFPDDLALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXDRMRPDAGTVVVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFLEQTAWAQPLAAVLLALRSVPFATLIGFFSLSIGSSNPQINKLVRFNMQQAINLDIALILPGVVG 345          
BLAST of mRNA_H-elongata_contig16167.3935.1 vs. uniprot
Match: D8LTM8_ECTSI (TIC 20 related, plastid import n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTM8_ECTSI)

HSP 1 Score: 251 bits (642), Expect = 3.490e-76
Identity = 145/336 (43.15%), Postives = 213/336 (63.39%), Query Frame = 1
Query:  190 AERRVTELRERAAAFRAQAAALEDQRALERRANADRSFKSFAK--DGVVGMTELQAGLEGSLKKTFIQQLAVRMGRKPSPAEINEKIAELPGGCLFPDDLARRLVDVYDQDGDGLLLQSEFAPVEELRARLESMFRERREE-QLEA---RKKEXXXXXXGKRIAEESRLGGS-----NDATATATERALCALPYLLPFSDGIVYARHLYETFPQQLEWTEPLAVAMIFYRNLPFATLAAFFGMSLLASSPQVNKLLRFNLIQAINLDIALIVPSLVGPLARWSLGDDAYKLVPITNALSDVLFVALLVAIVYSVATSAMGTFPNKLPLFGPINREN 1164
            A  +  +LR  AA  R QA  LE +R  E++  A  +F SF    DG V + EL AGLEG L+K FI+++   M RKPSPAE++E+I+E+PGG L P +LA++L++ YD +GDG+L  SEFA   ++R RL+S+F +R +E +LEA   R++E       K   E    G +     ND   T T++ L  LPY LP  D +V+  H+++TFP QL + EPL   ++ YR+LPF+ L  FFG+   A+ P+VNKL+RFNL QA+ LDIA+  PS+   +    LG+D+ KL P+    +DV+FV ++  ++YS+A+SA+G  P  LP+ G +NRE+
Sbjct:   84 AAEKAAKLRAFAAELRLQAEELESKRDSEKQQAAQEAFDSFDTNDDGTVDVKELIAGLEGQLRKDFIKRMTKTMKRKPSPAEVDERISEMPGGSLLPMELAQKLIESYDTNGDGVLQPSEFASKADMRVRLDSLFADRAQEARLEAAAAREREIENRGADKARQEAKARGLALPEDFNDGPPTITDKLLSVLPYTLPLMDSLVFGAHIFQTFPTQLSFLEPLVAILLIYRSLPFSGLILFFGLQWFAAKPEVNKLVRFNLRQAVILDIAMFFPSIFAFIITSVLGEDSAKLAPLATVCNDVIFVTVVACVLYSIASSAIGVLPESLPILGKMNRES 419          
BLAST of mRNA_H-elongata_contig16167.3935.1 vs. uniprot
Match: A0A6H5KUU9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU9_9PHAE)

HSP 1 Score: 236 bits (603), Expect = 2.040e-72
Identity = 148/281 (52.67%), Postives = 187/281 (66.55%), Query Frame = 1
Query:  343 LQAGLEGSLKKTF-IQQLAVRMGRKPSPAEINEKIAELPGGCLFPDDLARRLVDVYDQDGDGLLLQSEFAPVEELRARLESMFRERREEQLEARKKEXXXXXXGKRI----AEESRLGGSNDATATATERALCALPYLLPFSDGIVYARHLYETFPQQLEWTEPLAVAMIFYRNLPFATLAAFFGMSLLASSPQVNKLLRFNLIQAINLDIALIVPSLVGPLARWSLGDDAYKLVPITNALSDVLFVALLVAIVYSVATSAMGTFPNKLPLFGPINRENPD 1170
            L  G +G+  KT  IQ+  VR   K  P         LP   +     A  LV  YDQ+GDGLL QSEFAP EELR RLE++F ++REE+  AR + XXXXXX K      A E   G  ND  AT  ++AL ALPY+LP +DG+V+A HL+  FP+Q  W +PLA  ++  R++PFATL  FF +S+ +S+PQ+NKL+RFN+ QAINLDIALI+P +VG +    LG DA KL P+ NA SDV+FVALL A+ YSV TSA G+FPNKLPL G +NRENPD
Sbjct:    2 LCVGGDGNAPKTSRIQRFRVRSSSKSCP---------LPARFVK----AGVLVRSYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXXKMRPDAGAVEVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLVGFFSLSVGSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPD 269          
BLAST of mRNA_H-elongata_contig16167.3935.1 vs. uniprot
Match: A0A6H5JBJ0_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ0_9PHAE)

HSP 1 Score: 230 bits (587), Expect = 1.340e-69
Identity = 137/286 (47.90%), Postives = 177/286 (61.89%), Query Frame = 1
Query:  316 KDGVVGMTELQAGLEGSLKKTFIQQLAVRMGRKPSPAEINEKIAELPGGCLFPDDLARRLVDVYDQDGDGLLLQSEFAPVEELRARLESMFRERREEQLEARKKEXXXXXXGKRIAEESRLGGSNDATATATERALCALPYLLPFSDGIVYARHLYETFPQQLEWTEPLAVAMIFYRNLPFATLAAFFGMSL-LASSPQVNKLLRFNLIQAINLDIALIVPSLVGPLARWSLGDDAYKLVPITNALSDVLFVALLVAIVYSVATSAMGTFPNKLPLFGPINRENPD 1170
            KDG V + EL+AGLE  L++   + L  RMGRKPS  E++E+IA LPGG LFPD+LA +L+  YDQ+GDGLL  SEFAP EELR RLE +F ++RE++  AR +E       K                            + P +  +V A            W +PLA  ++  R++PFATL  FF +S+    +PQVNKL+RFN  QAIN+DIALI+P +VG +A   LG DA KL P+ NA SDV+FVALL A+ YSV TSA G+FPNKLPL G +NRENP+
Sbjct:   54 KDGSVDIAELKAGLESPLRRGLTKTLQARMGRKPSKEEVDERIAGLPGGTLFPDELALKLIQTYDQNGDGLLQLSEFAPTEELRTRLEDLFSQQREDERVARMEERQRRMDDK----------------------------MRPDTGAVVTA------------WAQPLAAVLLALRSVPFATLIGFFSLSVHRLRNPQVNKLVRFNTQQAINVDIALILPGVVGAIAGAVLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPE 299          
BLAST of mRNA_H-elongata_contig16167.3935.1 vs. uniprot
Match: A0A6H5KVD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVD7_9PHAE)

HSP 1 Score: 194 bits (492), Expect = 6.520e-57
Identity = 96/164 (58.54%), Postives = 123/164 (75.00%), Query Frame = 1
Query:  679 GGSNDATATATERALCALPYLLPFSDGIVYARHLYETFPQQLEWTEPLAVAMIFYRNLPFATLAAFFGMSLLASSPQVNKLLRFNLIQAINLDIALIVPSLVGPLARWSLGDDAYKLVPITNALSDVLFVALLVAIVYSVATSAMGTFPNKLPLFGPINRENPD 1170
            G  ND  AT  ++AL ALPY+LP +DG+V+A HL+  FP+Q  W EPL   ++  R++PFATL  FF +S+ +S+PQ+NKL+RFN+ QAINLDIALI+P +VG +    LG DA KL P+ NA SDV+FVALL A+ YSV TSA G+FPNKLPL G +NRENPD
Sbjct:   24 GDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAEPLVAVLLALRSVPFATLIGFFSLSVGSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPD 187          
BLAST of mRNA_H-elongata_contig16167.3935.1 vs. uniprot
Match: A0A6H5KCI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI4_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 5.450e-56
Identity = 115/249 (46.18%), Postives = 146/249 (58.63%), Query Frame = 1
Query:  433 NEKIAELPGGCLFPDDLARRLVDVYDQDGDGLLLQSEFAPVEELRARLESMFRERREEQLEARKKEXXXXXXGKRIAEESRL----GGSNDATATATERALCALPYLLPFSDGIVYARHLYETFPQQLEWTEPLAVAMIFYRNLPFATLAAFFGMSLLASSPQVNKLLRFNLIQAINLDIALIVPSLVGPLARWSLGDDAYKLVPITNALSDVLFVALLVAIVYSVATSAMGTFPNKLPLFGPINRENP 1167
            +E+IA LPGG LFPD+LA +L+  YD +G+GLL QSEFAP EELR RLE++F ++REE+  AR +E           +   +    G  ND      + AL ALPYLLP +DGIV+A HL+  FP+Q  W +PLA A                                      IN+DIALI+P +VG +A   LG DA KL P+ NA SDV+FVALL A+ YSV TSA G+FP+KLPL G +NRENP
Sbjct:   21 DERIAGLPGGTLFPDELALKLIQTYDHNGNGLLQQSEFAPTEELRTRLENLFSQQREEKRLARMEERQRQMDDNMRPDAGAVVVSPGDVNDGLVNTADNALSALPYLLPLADGIVFAAHLFGVFPEQTAWAQPLAAA--------------------------------------INVDIALILPGVVGAIAGAVLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPSKLPLLGRLNRENP 231          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16167.3935.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2I6U1M4_SACJA2.290e-12252.94Tic20-like protein n=15 Tax=Saccharina japonica Ta... [more]
A0A6H5JY95_9PHAE1.170e-11761.39EF-hand domain-containing protein n=2 Tax=Ectocarp... [more]
D8LS19_ECTSI1.720e-11157.36EF-hand domain-containing protein n=7 Tax=Ectocarp... [more]
D7FRG5_ECTSI1.070e-9253.02EF-hand domain-containing protein n=2 Tax=Ectocarp... [more]
D8LS20_ECTSI5.040e-8255.51EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D8LTM8_ECTSI3.490e-7643.15TIC 20 related, plastid import n=2 Tax=Ectocarpus ... [more]
A0A6H5KUU9_9PHAE2.040e-7252.67Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBJ0_9PHAE1.340e-6947.90EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KVD7_9PHAE6.520e-5758.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCI4_9PHAE5.450e-5646.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16167contigH-elongata_contig16167:5241..6419 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score360.1
Seed ortholog evalue1.3e-96
Seed eggNOG ortholog2880.D7FRH5
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0009507,GO:0009526,GO:0009528,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009706,GO:0009941,GO:0016020,GO:0019866,GO:0031090,GO:0031967,GO:0031969,GO:0031975,GO:0031976,GO:0031984,GO:0034357,GO:0042170,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0055035
EggNOG free text desc.protein transport
EggNOG OGs2BYWW@1,2QUSD@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptionEF-hand domain pair
Ec32 orthologEc-08_000950.1
Exons1
Model size1179
Cds size1179
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929947.5092282-CDS-H-elongata_contig16167:5240..64191622929947.5092282-CDS-H-elongata_contig16167:5240..6419Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16167 5241..6419 -
1691679219.1689086-CDS-H-elongata_contig16167:5240..64191691679219.1689086-CDS-H-elongata_contig16167:5240..6419Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16167 5241..6419 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16167.3935.1prot_H-elongata_contig16167.3935.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig16167 5241..6419 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig16167.3935.1

>prot_H-elongata_contig16167.3935.1 ID=prot_H-elongata_contig16167.3935.1|Name=mRNA_H-elongata_contig16167.3935.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=393bp
MVSITTSMVFLFAPMLGPTTAFVSSPLSFPSTRRPQFCSTSSRPSSMRTV
FCIVSGDTDADSSAERRVTELRERAAAFRAQAAALEDQRALERRANADRS
FKSFAKDGVVGMTELQAGLEGSLKKTFIQQLAVRMGRKPSPAEINEKIAE
LPGGCLFPDDLARRLVDVYDQDGDGLLLQSEFAPVEELRARLESMFRERR
EEQLEARKKERERELEGKRIAEESRLGGSNDATATATERALCALPYLLPF
SDGIVYARHLYETFPQQLEWTEPLAVAMIFYRNLPFATLAAFFGMSLLAS
SPQVNKLLRFNLIQAINLDIALIVPSLVGPLARWSLGDDAYKLVPITNAL
SDVLFVALLVAIVYSVATSAMGTFPNKLPLFGPINRENPDKS*
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mRNA from alignment at H-elongata_contig16167:5241..6419-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig16167.3935.1 ID=mRNA_H-elongata_contig16167.3935.1|Name=mRNA_H-elongata_contig16167.3935.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1179bp|location=Sequence derived from alignment at H-elongata_contig16167:5241..6419- (Himanthalia elongata Himel1 dioecious)
ATGGTGTCTATTACCACTAGTATGGTATTTTTATTTGCACCGATGCTAGG TCCGACCACAGCATTCGTATCTTCACCTCTATCGTTTCCATCGACTCGAC GACCCCAATTTTGTTCGACGTCGTCAAGGCCTTCAAGCATGCGCACTGTC TTCTGCATAGTCAGCGGCGACACCGACGCCGACAGCAGCGCAGAGCGAAG GGTTACCGAGCTCCGTGAAAGGGCGGCCGCCTTCCGCGCCCAGGCGGCTG CACTCGAAGACCAAAGGGCACTAGAGCGGAGAGCAAATGCAGATCGCTCC TTCAAGTCTTTCGCTAAAGACGGTGTGGTGGGAATGACGGAGCTGCAGGC AGGGTTAGAGGGCTCCTTGAAGAAGACCTTCATTCAGCAGCTGGCGGTTC GCATGGGCCGTAAGCCCAGCCCCGCGGAGATCAACGAGAAGATTGCCGAG CTCCCGGGGGGGTGTCTGTTTCCGGACGACCTTGCGCGGAGGTTGGTTGA TGTGTACGACCAGGATGGGGATGGGCTGCTGCTGCAGTCGGAGTTTGCGC CGGTGGAGGAGTTGAGGGCTAGGCTGGAGAGCATGTTTCGCGAGCGTCGA GAGGAACAACTAGAGGCGCGGAAAAAGGAGCGCGAGCGCGAGTTGGAGGG GAAGAGAATAGCGGAGGAGAGTCGTTTGGGAGGAAGCAATGATGCCACCG CCACGGCGACCGAGAGAGCGCTGTGCGCGCTTCCTTACTTGCTGCCTTTT TCCGACGGTATCGTTTACGCTCGACACCTCTACGAGACCTTCCCGCAGCA GCTGGAGTGGACCGAACCGCTCGCGGTAGCGATGATCTTCTACCGTAACC TCCCTTTTGCTACTCTGGCGGCGTTTTTCGGCATGTCTTTACTCGCTAGC AGTCCTCAGGTAAACAAGTTGCTGAGGTTCAATTTAATTCAGGCGATCAA TCTTGACATCGCGTTGATCGTGCCATCGTTGGTGGGACCGCTAGCGAGGT GGTCTCTTGGAGATGACGCCTACAAGCTTGTGCCCATTACGAACGCTCTG TCTGATGTGTTGTTTGTCGCACTGCTAGTGGCTATCGTGTATTCAGTAGC CACGTCGGCGATGGGGACGTTTCCCAACAAGCTTCCATTGTTCGGTCCAA TCAACCGCGAGAACCCCGATAAAAGCTAA
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Coding sequence (CDS) from alignment at H-elongata_contig16167:5241..6419-

>mRNA_H-elongata_contig16167.3935.1 ID=mRNA_H-elongata_contig16167.3935.1|Name=mRNA_H-elongata_contig16167.3935.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2358bp|location=Sequence derived from alignment at H-elongata_contig16167:5241..6419- (Himanthalia elongata Himel1 dioecious)
ATGGTGTCTATTACCACTAGTATGGTATTTTTATTTGCACCGATGCTAGG
TCCGACCACAGCATTCGTATCTTCACCTCTATCGTTTCCATCGACTCGAC
GACCCCAATTTTGTTCGACGTCGTCAAGGCCTTCAAGCATGCGCACTGTC
TTCTGCATAGTCAGCGGCGACACCGACGCCGACAGCAGCGCAGAGCGAAG
GGTTACCGAGCTCCGTGAAAGGGCGGCCGCCTTCCGCGCCCAGGCGGCTG
CACTCGAAGACCAAAGGGCACTAGAGCGGAGAGCAAATGCAGATCGCTCC
TTCAAGTCTTTCGCTAAAGACGGTGTGGTGGGAATGACGGAGCTGCAGGC
AGGGTTAGAGGGCTCCTTGAAGAAGACCTTCATTCAGCAGCTGGCGGTTC
GCATGGGCCGTAAGCCCAGCCCCGCGGAGATCAACGAGAAGATTGCCGAG
CTCCCGGGGGGGTGTCTGTTTCCGGACGACCTTGCGCGGAGGTTGGTTGA
TGTGTACGACCAGGATGGGGATGGGCTGCTGCTGCAGTCGGAGTTTGCGC
CGGTGGAGGAGTTGAGGGCTAGGCTGGAGAGCATGTTTCGCGAGCGTCGA
GAGGAACAACTAGAGGCGCGGAAAAAGGAGCGCGAGCGCGAGTTGGAGGG
GAAGAGAATAGCGGAGGAGAGTCGTTTGGGAGGAAGCAATGATGCCACCG
CCACGGCGACCGAGAGAGCGCTGTGCGCGCTTCCTTACTTGCTGCCTTTT
TCCGACGGTATCGTTTACGCTCGACACCTCTACGAGACCTTCCCGCAGCA
GCTGGAGTGGACCGAACCGCTCGCGGTAGCGATGATCTTCTACCGTAACC
TCCCTTTTGCTACTCTGGCGGCGTTTTTCGGCATGTCTTTACTCGCTAGC
AGTCCTCAGGTAAACAAGTTGCTGAGGTTCAATTTAATTCAGGCGATCAA
TCTTGACATCGCGTTGATCGTGCCATCGTTGGTGGGACCGCTAGCGAGGT
GGTCTCTTGGAGATGACGCCTACAAGCTTGTGCCCATTACGAACGCTCTG
TCTGATGTGTTGTTTGTCGCACTGCTAGTGGCTATCGTGTATTCAGTAGC
CACGTCGGCGATGGGGACGTTTCCCAACAAGCTTCCATTGTTCGGTCCAA
TCAACCGCGAGAACCCCGATAAAAGCTAAATGGTGTCTATTACCACTAGT
ATGGTATTTTTATTTGCACCGATGCTAGGTCCGACCACAGCATTCGTATC
TTCACCTCTATCGTTTCCATCGACTCGACGACCCCAATTTTGTTCGACGT
CGTCAAGGCCTTCAAGCATGCGCACTGTCTTCTGCATAGTCAGCGGCGAC
ACCGACGCCGACAGCAGCGCAGAGCGAAGGGTTACCGAGCTCCGTGAAAG
GGCGGCCGCCTTCCGCGCCCAGGCGGCTGCACTCGAAGACCAAAGGGCAC
TAGAGCGGAGAGCAAATGCAGATCGCTCCTTCAAGTCTTTCGCTAAAGAC
GGTGTGGTGGGAATGACGGAGCTGCAGGCAGGGTTAGAGGGCTCCTTGAA
GAAGACCTTCATTCAGCAGCTGGCGGTTCGCATGGGCCGTAAGCCCAGCC
CCGCGGAGATCAACGAGAAGATTGCCGAGCTCCCGGGGGGGTGTCTGTTT
CCGGACGACCTTGCGCGGAGGTTGGTTGATGTGTACGACCAGGATGGGGA
TGGGCTGCTGCTGCAGTCGGAGTTTGCGCCGGTGGAGGAGTTGAGGGCTA
GGCTGGAGAGCATGTTTCGCGAGCGTCGAGAGGAACAACTAGAGGCGCGG
AAAAAGGAGCGCGAGCGCGAGTTGGAGGGGAAGAGAATAGCGGAGGAGAG
TCGTTTGGGAGGAAGCAATGATGCCACCGCCACGGCGACCGAGAGAGCGC
TGTGCGCGCTTCCTTACTTGCTGCCTTTTTCCGACGGTATCGTTTACGCT
CGACACCTCTACGAGACCTTCCCGCAGCAGCTGGAGTGGACCGAACCGCT
CGCGGTAGCGATGATCTTCTACCGTAACCTCCCTTTTGCTACTCTGGCGG
CGTTTTTCGGCATGTCTTTACTCGCTAGCAGTCCTCAGGTAAACAAGTTG
CTGAGGTTCAATTTAATTCAGGCGATCAATCTTGACATCGCGTTGATCGT
GCCATCGTTGGTGGGACCGCTAGCGAGGTGGTCTCTTGGAGATGACGCCT
ACAAGCTTGTGCCCATTACGAACGCTCTGTCTGATGTGTTGTTTGTCGCA
CTGCTAGTGGCTATCGTGTATTCAGTAGCCACGTCGGCGATGGGGACGTT
TCCCAACAAGCTTCCATTGTTCGGTCCAATCAACCGCGAGAACCCCGATA
AAAGCTAA
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