prot_H-elongata_contig160441.3875.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig160441.3875.1
Unique Nameprot_H-elongata_contig160441.3875.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length93
Homology
BLAST of mRNA_H-elongata_contig160441.3875.1 vs. uniprot
Match: A0A6H5KM40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM40_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 5.840e-27
Identity = 63/91 (69.23%), Postives = 72/91 (79.12%), Query Frame = 0
Query:    1 WSLQFINYPLLLLAKSCKLVPVMLVGVLMLGRRHTQAEYAAVLLITAGVALFSLKPGTIGE-ALGREGGGDE---DNRFVGLSLVRGSIRL 87
            WSL +I+YPLLLLAKSCKLVPVMLVGV++LGRRHT+AEY AV LITAGVALFSLKPG   E ALG EG GDE       +GL+LV  ++ L
Sbjct:  100 WSLSYISYPLLLLAKSCKLVPVMLVGVVLLGRRHTRAEYLAVGLITAGVALFSLKPGAFKEDALGEEGAGDEAGGQKNAIGLALVTVNLLL 190          
BLAST of mRNA_H-elongata_contig160441.3875.1 vs. uniprot
Match: D7FT27_ECTSI (UDP-Glc/Gal endoplasmic reticulum nucleotide sugar transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT27_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 9.720e-23
Identity = 59/91 (64.84%), Postives = 68/91 (74.73%), Query Frame = 0
Query:    1 WSLQFINYPLLLLAKSCKLVPVMLVGVLMLGRRHTQAEYAAVLLITAGVALFSLKPGTIGE-ALGREGGGDED---NRFVGLSLVRGSIRL 87
            WSL +I+YPLLLLAKSCKLVPVMLVGV++LGRRHT+AEY AV LITAGVALFSLKPG   E ALG           N  +GL+LV  ++ L
Sbjct:  100 WSLSYISYPLLLLAKSCKLVPVMLVGVVLLGRRHTRAEYLAVGLITAGVALFSLKPGAFKEDALGEXXXXXXXXGKNNAIGLALVTVNLLL 190          
BLAST of mRNA_H-elongata_contig160441.3875.1 vs. uniprot
Match: A0A835ZGA1_9STRA (UDP-Glc/Gal endoplasmic reticulum nucleotide sugar transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGA1_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 3.590e-16
Identity = 42/56 (75.00%), Postives = 50/56 (89.29%), Query Frame = 0
Query:    2 SLQFINYPLLLLAKSCKLVPVMLVGVLMLGRRHTQAEYAAVLLITAGVALFSLKPG 57
            SL +INYPLLLLAKSCKLVPVM++G L+ G+R+T+AEY +V LITAGVALFS KPG
Sbjct:   97 SLAYINYPLLLLAKSCKLVPVMVMGFLVSGKRYTRAEYLSVGLITAGVALFSYKPG 152          
BLAST of mRNA_H-elongata_contig160441.3875.1 vs. uniprot
Match: A0A7S3YET9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YET9_HETAK)

HSP 1 Score: 76.3 bits (186), Expect = 2.070e-15
Identity = 38/57 (66.67%), Postives = 48/57 (84.21%), Query Frame = 0
Query:    1 WSLQFINYPLLLLAKSCKLVPVMLVGVLMLGRRHTQAEYAAVLLITAGVALFSLKPG 57
            +SL+FIN+PLL+L KSCKLVPVML+G L+ G+R+   +YAAV LIT GVA FS+KPG
Sbjct:  106 YSLRFINFPLLVLGKSCKLVPVMLMGALIGGKRYPAKDYAAVALITVGVAAFSMKPG 162          
BLAST of mRNA_H-elongata_contig160441.3875.1 vs. uniprot
Match: A0A8B7K4D0_9AVES (solute carrier family 35 member B1-like n=1 Tax=Apteryx mantelli mantelli TaxID=202946 RepID=A0A8B7K4D0_9AVES)

HSP 1 Score: 65.5 bits (158), Expect = 1.220e-11
Identity = 35/74 (47.30%), Postives = 49/74 (66.22%), Query Frame = 0
Query:    2 SLQFINYPLLLLAKSCKLVPVMLVGVLMLGRRHTQAEYAAVLLITAGVALFSLKPGTIGEALGREGGGDEDNRF 75
            +LQF+NYP  +L KSCK +PVML+GV +L +++  A+Y  VLLI  GVALF  KP        ++G G +D+ F
Sbjct:   46 ALQFVNYPTQVLGKSCKPIPVMLLGVTLLRKKYPLAKYLCVLLIVTGVALFMYKP--------KKGAGSDDHVF 111          
BLAST of mRNA_H-elongata_contig160441.3875.1 vs. uniprot
Match: K7F8Z5_PELSI (Solute carrier family 35 member B1 n=3 Tax=Cryptodira TaxID=8464 RepID=K7F8Z5_PELSI)

HSP 1 Score: 68.2 bits (165), Expect = 1.480e-11
Identity = 37/76 (48.68%), Postives = 49/76 (64.47%), Query Frame = 0
Query:    2 SLQFINYPLLLLAKSCKLVPVMLVGVLMLGRRHTQAEYAAVLLITAGVALFSLKPGTIGEALGREGGGDEDNRFVG 77
            +LQF+NYP  +L KSCK +PVML+GV ML +++  A+Y  VLLI  GVALF  KP        ++GG D D+   G
Sbjct:   75 ALQFVNYPTQVLGKSCKPIPVMLLGVTMLRKKYPLAKYLCVLLIVTGVALFMYKP--------KKGGDDADDHIFG 142          
BLAST of mRNA_H-elongata_contig160441.3875.1 vs. uniprot
Match: A0A7J7U947_PIPKU (Solute carrier family 35 member B1 n=5 Tax=Eutheria TaxID=9347 RepID=A0A7J7U947_PIPKU)

HSP 1 Score: 67.0 bits (162), Expect = 2.820e-11
Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0
Query:    2 SLQFINYPLLLLAKSCKLVPVMLVGVLMLGRRHTQAEYAAVLLITAGVALFSLKP 56
            +LQF+NYP  +L KSCK +PVML+GV +L +R+ +A+Y  VLLI AGVALF  KP
Sbjct:   37 ALQFVNYPTQVLGKSCKPIPVMLLGVTLLKKRYPKAKYLCVLLIVAGVALFMYKP 91          
BLAST of mRNA_H-elongata_contig160441.3875.1 vs. uniprot
Match: A0A7L1XF44_9AVES (S35B1 protein (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A7L1XF44_9AVES)

HSP 1 Score: 66.6 bits (161), Expect = 3.840e-11
Identity = 36/74 (48.65%), Postives = 50/74 (67.57%), Query Frame = 0
Query:    2 SLQFINYPLLLLAKSCKLVPVMLVGVLMLGRRHTQAEYAAVLLITAGVALFSLKPGTIGEALGREGGGDEDNRF 75
            +LQF+NYP  +L KSCK +PVML+GV +L +++  A+Y  VLLI AGVALF  KP        ++G G +D+ F
Sbjct:   35 ALQFVNYPTQVLGKSCKPIPVMLLGVTVLRKKYPPAKYLCVLLIVAGVALFLYKP--------KKGAGSDDHVF 100          
BLAST of mRNA_H-elongata_contig160441.3875.1 vs. uniprot
Match: UPI00174F5D4C (solute carrier family 35 member B1 isoform X2 n=1 Tax=Pipistrellus kuhlii TaxID=59472 RepID=UPI00174F5D4C)

HSP 1 Score: 67.0 bits (162), Expect = 4.420e-11
Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0
Query:    2 SLQFINYPLLLLAKSCKLVPVMLVGVLMLGRRHTQAEYAAVLLITAGVALFSLKP 56
            +LQF+NYP  +L KSCK +PVML+GV +L +R+ +A+Y  VLLI AGVALF  KP
Sbjct:   95 ALQFVNYPTQVLGKSCKPIPVMLLGVTLLKKRYPKAKYLCVLLIVAGVALFMYKP 149          
BLAST of mRNA_H-elongata_contig160441.3875.1 vs. uniprot
Match: E0CZ89_MOUSE (Solute carrier family 35 member B1 (Fragment) n=1 Tax=Mus musculus TaxID=10090 RepID=E0CZ89_MOUSE)

HSP 1 Score: 64.7 bits (156), Expect = 4.550e-11
Identity = 32/55 (58.18%), Postives = 42/55 (76.36%), Query Frame = 0
Query:    2 SLQFINYPLLLLAKSCKLVPVMLVGVLMLGRRHTQAEYAAVLLITAGVALFSLKP 56
            +LQF+NYP  +L KSCK +PVML+GV +L +++  A+Y  VLLI AGVALF  KP
Sbjct:   94 ALQFVNYPTQVLGKSCKPIPVMLLGVTLLKKKYPLAKYLCVLLIVAGVALFMYKP 148          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig160441.3875.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KM40_9PHAE5.840e-2769.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FT27_ECTSI9.720e-2364.84UDP-Glc/Gal endoplasmic reticulum nucleotide sugar... [more]
A0A835ZGA1_9STRA3.590e-1675.00UDP-Glc/Gal endoplasmic reticulum nucleotide sugar... [more]
A0A7S3YET9_HETAK2.070e-1566.67Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A8B7K4D0_9AVES1.220e-1147.30solute carrier family 35 member B1-like n=1 Tax=Ap... [more]
K7F8Z5_PELSI1.480e-1148.68Solute carrier family 35 member B1 n=3 Tax=Cryptod... [more]
A0A7J7U947_PIPKU2.820e-1160.00Solute carrier family 35 member B1 n=5 Tax=Eutheri... [more]
A0A7L1XF44_9AVES3.840e-1148.65S35B1 protein (Fragment) n=2 Tax=Neognathae TaxID=... [more]
UPI00174F5D4C4.420e-1160.00solute carrier family 35 member B1 isoform X2 n=1 ... [more]
E0CZ89_MOUSE4.550e-1158.18Solute carrier family 35 member B1 (Fragment) n=1 ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013657UAA transporterPFAMPF08449UAAcoord: 2..58
e-value: 3.2E-15
score: 56.1
NoneNo IPR availablePANTHERPTHR10778:SF10SOLUTE CARRIER FAMILY 35 MEMBER B1coord: 2..64
NoneNo IPR availablePANTHERPTHR10778SOLUTE CARRIER FAMILY 35 MEMBER Bcoord: 2..64
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 31..36
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 55..92
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..54
NoneNo IPR availableSUPERFAMILY103481Multidrug resistance efflux transporter EmrEcoord: 3..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig160441contigH-elongata_contig160441:267..940 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig160441.3875.1mRNA_H-elongata_contig160441.3875.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig160441 267..940 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig160441.3875.1 ID=prot_H-elongata_contig160441.3875.1|Name=mRNA_H-elongata_contig160441.3875.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=93bp
WSLQFINYPLLLLAKSCKLVPVMLVGVLMLGRRHTQAEYAAVLLITAGVA
LFSLKPGTIGEALGREGGGDEDNRFVGLSLVRGSIRLVLLHR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013657UAA