prot_H-elongata_contig159583.3840.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig159583.3840.1
Unique Nameprot_H-elongata_contig159583.3840.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length83
Homology
BLAST of mRNA_H-elongata_contig159583.3840.1 vs. uniprot
Match: D7FMY2_ECTSI (Hydroxymethylbilane synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMY2_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 2.960e-32
Identity = 61/73 (83.56%), Postives = 68/73 (93.15%), Query Frame = 0
Query:    1 DGSVIGSASLRRQAQLLNKNPSFKVINFRGNVQTRLRKLDEDVVDATLLAYAGLKRLDLAHVATSVLDQDVRL 73
            DGSVIGSASLRRQAQLL  NP+FKV+NFRGNVQTRLRKLDE++VDATLLA+AGLKRL++A VATSVLDQD  L
Sbjct:  178 DGSVIGSASLRRQAQLLRANPTFKVVNFRGNVQTRLRKLDEEIVDATLLAFAGLKRLEMAQVATSVLDQDAML 250          
BLAST of mRNA_H-elongata_contig159583.3840.1 vs. uniprot
Match: A0A7S2XXR7_9STRA (Hydroxymethylbilane synthase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXR7_9STRA)

HSP 1 Score: 113 bits (282), Expect = 1.920e-28
Identity = 56/73 (76.71%), Postives = 64/73 (87.67%), Query Frame = 0
Query:    1 DGSVIGSASLRRQAQLLNKNPSFKVINFRGNVQTRLRKLDEDVVDATLLAYAGLKRLDLAHVATSVLDQDVRL 73
            DGSV+GSASLRRQAQLL KNP+ KV+NFRGNVQTRLRKLDE +VDATLLA AGL+R+D+A VAT VL+ D  L
Sbjct:  162 DGSVVGSASLRRQAQLLAKNPTLKVVNFRGNVQTRLRKLDEGIVDATLLAIAGLRRMDMADVATCVLEMDEML 234          
BLAST of mRNA_H-elongata_contig159583.3840.1 vs. uniprot
Match: A0A835YJY2_9STRA (Hydroxymethylbilane synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJY2_9STRA)

HSP 1 Score: 112 bits (281), Expect = 4.680e-28
Identity = 55/72 (76.39%), Postives = 64/72 (88.89%), Query Frame = 0
Query:    2 GSVIGSASLRRQAQLLNKNPSFKVINFRGNVQTRLRKLDEDVVDATLLAYAGLKRLDLAHVATSVLDQDVRL 73
            G+VIGSASLRRQ+Q+L K P  KV+NFRGNVQTRLRKLDE+VVDAT+LAYAGLKRL++AHVAT VL+ D  L
Sbjct:  164 GAVIGSASLRRQSQILAKRPDLKVVNFRGNVQTRLRKLDEEVVDATMLAYAGLKRLNMAHVATHVLEMDQML 235          
BLAST of mRNA_H-elongata_contig159583.3840.1 vs. uniprot
Match: A0A6S9LNX4_HETAK (Hydroxymethylbilane synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9LNX4_HETAK)

HSP 1 Score: 112 bits (279), Expect = 7.900e-28
Identity = 58/73 (79.45%), Postives = 63/73 (86.30%), Query Frame = 0
Query:    1 DGSVIGSASLRRQAQLLNKNPSFKVINFRGNVQTRLRKLDEDVVDATLLAYAGLKRLDLAHVATSVLDQDVRL 73
            DGSVIGSASLRRQAQLL KNP+ KV+NFRGNVQTRLRKLDE VVDATLLA AGLKR+D+  VAT VL+ D  L
Sbjct:  162 DGSVIGSASLRRQAQLLAKNPTLKVVNFRGNVQTRLRKLDEGVVDATLLALAGLKRMDMDDVATKVLEFDEML 234          
BLAST of mRNA_H-elongata_contig159583.3840.1 vs. uniprot
Match: A0A7S0BTS6_9RHOD (Hydroxymethylbilane synthase (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BTS6_9RHOD)

HSP 1 Score: 105 bits (261), Expect = 8.230e-27
Identity = 53/73 (72.60%), Postives = 59/73 (80.82%), Query Frame = 0
Query:    1 DGSVIGSASLRRQAQLLNKNPSFKVINFRGNVQTRLRKLDEDVVDATLLAYAGLKRLDLAHVATSVLDQDVRL 73
            DGSVIGSASLRRQAQ+L KNP+ KV+NFRGNVQTRLRKL E  VDAT+LAYAGL R+D+    T VLD D  L
Sbjct:   43 DGSVIGSASLRRQAQILAKNPNLKVVNFRGNVQTRLRKLKEGQVDATMLAYAGLARMDMTENVTKVLDWDEML 115          
BLAST of mRNA_H-elongata_contig159583.3840.1 vs. uniprot
Match: A0A7S2SQX8_9STRA (Hydroxymethylbilane synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQX8_9STRA)

HSP 1 Score: 108 bits (270), Expect = 1.840e-26
Identity = 53/73 (72.60%), Postives = 62/73 (84.93%), Query Frame = 0
Query:    1 DGSVIGSASLRRQAQLLNKNPSFKVINFRGNVQTRLRKLDEDVVDATLLAYAGLKRLDLAHVATSVLDQDVRL 73
            DGSVIGSASLRRQAQ+  KNP+ KV+NFRGNVQTRLRKLD+  VDATLLAYAGLKR+D+   ATS+++ D  L
Sbjct:  162 DGSVIGSASLRRQAQIQAKNPTLKVVNFRGNVQTRLRKLDDGEVDATLLAYAGLKRMDMTEFATSIIEWDEML 234          
BLAST of mRNA_H-elongata_contig159583.3840.1 vs. uniprot
Match: A0A7R9YAK2_9STRA (Hydroxymethylbilane synthase (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAK2_9STRA)

HSP 1 Score: 107 bits (268), Expect = 2.140e-26
Identity = 52/70 (74.29%), Postives = 63/70 (90.00%), Query Frame = 0
Query:    1 DGSVIGSASLRRQAQLLNKNPSFKVINFRGNVQTRLRKLDEDVVDATLLAYAGLKRLDLAHVATSVLDQD 70
            DGS++GSASLRRQAQ+L  NP+ KV+NFRGNVQTRLRKL+E VVDATLLA AGL R+D++HVATSVL+ +
Sbjct:  174 DGSLVGSASLRRQAQILAINPTLKVVNFRGNVQTRLRKLNEGVVDATLLALAGLNRMDMSHVATSVLEYE 243          
BLAST of mRNA_H-elongata_contig159583.3840.1 vs. uniprot
Match: F0YAX4_AURAN (Hydroxymethylbilane synthase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAX4_AURAN)

HSP 1 Score: 107 bits (267), Expect = 3.090e-26
Identity = 54/73 (73.97%), Postives = 62/73 (84.93%), Query Frame = 0
Query:    1 DGSVIGSASLRRQAQLLNKNPSFKVINFRGNVQTRLRKLDEDVVDATLLAYAGLKRLDLAHVATSVLDQDVRL 73
            DGSVIGSASLRRQ+Q+L  NP+ K +NFRGNVQTRLRKLDE VVDATLLAYAGLKR+D+A   T+VL+ D  L
Sbjct:  140 DGSVIGSASLRRQSQILAINPTLKCVNFRGNVQTRLRKLDEGVVDATLLAYAGLKRMDMADEVTAVLEWDEML 212          
BLAST of mRNA_H-elongata_contig159583.3840.1 vs. uniprot
Match: B7FWY2_PHATC (Hydroxymethylbilane synthase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FWY2_PHATC)

HSP 1 Score: 106 bits (264), Expect = 7.990e-26
Identity = 53/73 (72.60%), Postives = 62/73 (84.93%), Query Frame = 0
Query:    1 DGSVIGSASLRRQAQLLNKNPSFKVINFRGNVQTRLRKLDEDVVDATLLAYAGLKRLDLAHVATSVLDQDVRL 73
            DGSVIG+ASLRRQAQL+ KNP+ K +NFRGNVQTRLRKLD+ VVDATLLA AGLKR+D+   ATS+L+ D  L
Sbjct:  130 DGSVIGTASLRRQAQLMAKNPTLKCVNFRGNVQTRLRKLDDGVVDATLLAIAGLKRMDMDGCATSILEWDEML 202          
BLAST of mRNA_H-elongata_contig159583.3840.1 vs. uniprot
Match: A0A7S2F873_9STRA (Hydroxymethylbilane synthase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F873_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.070e-25
Identity = 53/73 (72.60%), Postives = 61/73 (83.56%), Query Frame = 0
Query:    1 DGSVIGSASLRRQAQLLNKNPSFKVINFRGNVQTRLRKLDEDVVDATLLAYAGLKRLDLAHVATSVLDQDVRL 73
            DGSVIGSASLRRQAQ+L KNP+ KV+NFRGNVQTRLRKLD+  VDATLLA AGLKR+D+    TS L+Q+  L
Sbjct:  178 DGSVIGSASLRRQAQILAKNPTLKVVNFRGNVQTRLRKLDDGEVDATLLALAGLKRMDMTEFITSTLEQEEML 250          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig159583.3840.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMY2_ECTSI2.960e-3283.56Hydroxymethylbilane synthase n=2 Tax=Ectocarpus Ta... [more]
A0A7S2XXR7_9STRA1.920e-2876.71Hydroxymethylbilane synthase (Fragment) n=1 Tax=Fi... [more]
A0A835YJY2_9STRA4.680e-2876.39Hydroxymethylbilane synthase n=1 Tax=Tribonema min... [more]
A0A6S9LNX4_HETAK7.900e-2879.45Hydroxymethylbilane synthase n=1 Tax=Heterosigma a... [more]
A0A7S0BTS6_9RHOD8.230e-2772.60Hydroxymethylbilane synthase (Fragment) n=1 Tax=Rh... [more]
A0A7S2SQX8_9STRA1.840e-2672.60Hydroxymethylbilane synthase n=1 Tax=Rhizochromuli... [more]
A0A7R9YAK2_9STRA2.140e-2674.29Hydroxymethylbilane synthase (Fragment) n=1 Tax=Pi... [more]
F0YAX4_AURAN3.090e-2673.97Hydroxymethylbilane synthase n=1 Tax=Aureococcus a... [more]
B7FWY2_PHATC7.990e-2672.60Hydroxymethylbilane synthase n=2 Tax=Phaeodactylum... [more]
A0A7S2F873_9STRA1.070e-2572.60Hydroxymethylbilane synthase n=1 Tax=Dictyocha spe... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000860Porphobilinogen deaminasePRINTSPR00151PORPHBDMNASEcoord: 4..21
score: 53.7
coord: 23..40
score: 55.82
IPR000860Porphobilinogen deaminasePANTHERPTHR11557PORPHOBILINOGEN DEAMINASEcoord: 2..74
IPR022417Porphobilinogen deaminase, N-terminalPFAMPF01379Porphobil_deamcoord: 2..73
e-value: 2.7E-22
score: 79.3
NoneNo IPR availableGENE3D3.40.190.10coord: 1..77
e-value: 1.8E-23
score: 84.3
NoneNo IPR availableSUPERFAMILY53850Periplasmic binding protein-like IIcoord: 2..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig159583contigH-elongata_contig159583:458..1179 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig159583.3840.1mRNA_H-elongata_contig159583.3840.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig159583 458..1179 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig159583.3840.1 ID=prot_H-elongata_contig159583.3840.1|Name=mRNA_H-elongata_contig159583.3840.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bp
DGSVIGSASLRRQAQLLNKNPSFKVINFRGNVQTRLRKLDEDVVDATLLA
YAGLKRLDLAHVATSVLDQDVRLHGMIWDGIE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000860HemC
IPR022417Porphobilin_deaminase_N