prot_H-elongata_contig15656.3687.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15656.3687.1
Unique Nameprot_H-elongata_contig15656.3687.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length428
Homology
BLAST of mRNA_H-elongata_contig15656.3687.1 vs. uniprot
Match: A0A6H5KJR7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJR7_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 7.920e-45
Identity = 169/451 (37.47%), Postives = 212/451 (47.01%), Query Frame = 0
Query:   41 DGRGDGEDLRDLERWRAAAEGPQAL--TMEELAGQVTATDAGRGETFRKRFVRGLPPVEEEALAHGGAI-GLCAALRRQRSAQRAAYLMRVLGSS-SAKASEAKSPAEDAN------------EKXXXXXXXXGLESGRGRPPATLSDWVRMTAFVARAVEEGLAAISCNERVEVADRCGEKKQEASTTLVDSQWSLSSSQQQEQERQGNDAEAS------------------SVSEEVARSAKFEAFGRGLGEAVAICRMLQASAEDG--LRDVEGFAELERTWAEFRRRMRDARRRSG---------------------GETSEKMRPTADLEPGAGDEVSEEETWLSGGGGDS---GGGVRGSVESIQEAARRA------PA-GSTLCAVCLQPLEVFAGASPRL----------SVVEYCGVRYFAGAINLWVNVLDDRAPPADPLP 414
            DG G+ ED  DLERWR AA G      T+E+LA  ++A DA RGE FR+RFVRG PPVEEEA         L  A++RQRSA+RA  L+ +L ++ +A    A    ED              E+        GL++ R R P +L+DW  M ++V     +G+ A++                 AS T   S +S  ++     ER+G D  A                   +V  EVARS +FE+F RGL EA+ +CRMLQASAED   L+ V+GFA +ER WAE RR  R+A                          G   EK        PGA        + L GG G+    GGGV  +  SI  A R A      PA  S LC V LQPL VF+G +              VVEYCGVRY A A NLWVNVLD   PP  P P
Sbjct:  769 DGGGEAEDA-DLERWRGAAAGDLRPFPTVEDLAATMSAADAARGEKFRERFVRGRPPVEEEAXXXXXXXXALDVAVKRQRSARRAVCLLSMLDAAGTAGDGAADKDVEDGRDRGLTSGGAVEKEEEDKLELDLGLDTRRARSPPSLADWAAMMSYVTSMAGKGIEALAGGGXXXXXXSDRAAATPASLTRPSSPFSRPTT-----EREGADCRAEIDSAGLPPDAAALASDGGAVRREVARSQEFESFCRGLREAIKVCRMLQASAEDACCLQGVDGFAAMERAWAELRRSAREAXXXXXXXXXXXXXDLPSVFGVEDGEEGVCMEKEAQGVGGSPGAA-------SGLVGGKGERTAVGGGVAPAGSSIVAAIREACVETAPPAEDSALCGVSLQPLAVFSGGAXXXXXXXXXVEPPGVVEYCGVRYLACAFNLWVNVLDK--PPPRPSP 1204          
BLAST of mRNA_H-elongata_contig15656.3687.1 vs. uniprot
Match: D8LT09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT09_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 1.580e-44
Identity = 164/433 (37.88%), Postives = 205/433 (47.34%), Query Frame = 0
Query:   51 DLERWRA-AAEGPQAL-TMEELAGQVTATDAGRGETFRKRFVRGLPPVEEEALAHGGAIG-LCAALRRQRSAQRAAYLMRVLGSSSAKASEAK-------------SPAEDANEKXXXXXXXXGLESGRGRPPATLSDWVRMTAFVARAVEEGLAAISCNERVEVADRCGEKKQEASTTLVDSQWSLSSSQQQEQERQGNDAEAS------------------SVSEEVARSAKFEAFGRGLGEAVAICRMLQASAEDG--LRDVEGFAELERTWAEFRRRMRDARRR----------------SGGETSEKMRPTADL---EPGAGDEV---SEEETWLSGGGGDSGGGVRGSVESIQEAARRAPA---GSTLCAVCLQPLEVFAGASPRL--------SVVEYCGVRYFAGAINLWVNVLDDRAPPADPLP 414
            DLERWRA AAE  +   T+EELA  ++A DA RGE FR+RFVRG PPVEEE          L  A+RRQRSA+RA  L+ +L ++      A              S   D  E+        GL++ R R P +L+DW  M ++V      G+ A++         R G  +  A+ T        S   +   ER+G D  A                   +V  EVARS + E+F RGL EAV +CRMLQASAEDG  L+ V+GFA +ER WAE RR  R+A                     GE    M   A      PGA   +    +E T + GG   +G     SV +I+EA    P     S LC V LQPL VF+G +            VVEYCGVRY A AINLWVNVLD   PP  P P
Sbjct:  250 DLERWRAVAAEDLRPFPTVEELAATMSAADAARGEKFRERFVRGRPPVEEEXXXXXXXXXXLGVAVRRQRSARRAVCLLSMLDAAGTAGDGAADKDLEDGRDGGLTSGGGDEKEEQDKLELDLGLDTRRARSPPSLADWAAMMSYVTSMAARGIEALAGGG---AGSRSGSDR--AAATPASPTRPSSPFTRPTAEREGADCRAEIDSAGVPPDADALASDGVAVRREVARSQELESFCRGLREAVKVCRMLQASAEDGCCLQGVDGFAAMERAWAELRRSAREAXXXXXXXXXXGDLPSVFGVEDGEEGVCMGKEAQGVGGSPGAASGLVGGKDERTAVGGGVAPAG---SSSVAAIREACVETPPPAEDSALCGVSLQPLAVFSGGAGXXXXSGVEPPGVVEYCGVRYLACAINLWVNVLDK--PPPGPSP 672          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15656.3687.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJR7_9PHAE7.920e-4537.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LT09_ECTSI1.580e-4437.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 282..302

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15656contigH-elongata_contig15656:5220..6503 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15656.3687.1mRNA_H-elongata_contig15656.3687.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15656 2513..7797 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15656.3687.1 ID=prot_H-elongata_contig15656.3687.1|Name=mRNA_H-elongata_contig15656.3687.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=428bp
MELPAFSAPVEGAVHEAAATAAANTSVADITGAEGEMGGEDGRGDGEDLR
DLERWRAAAEGPQALTMEELAGQVTATDAGRGETFRKRFVRGLPPVEEEA
LAHGGAIGLCAALRRQRSAQRAAYLMRVLGSSSAKASEAKSPAEDANEKE
TELELDLGLESGRGRPPATLSDWVRMTAFVARAVEEGLAAISCNERVEVA
DRCGEKKQEASTTLVDSQWSLSSSQQQEQERQGNDAEASSVSEEVARSAK
FEAFGRGLGEAVAICRMLQASAEDGLRDVEGFAELERTWAEFRRRMRDAR
RRSGGETSEKMRPTADLEPGAGDEVSEEETWLSGGGGDSGGGVRGSVESI
QEAARRAPAGSTLCAVCLQPLEVFAGASPRLSVVEYCGVRYFAGAINLWV
NVLDDRAPPADPLPPAVAKDESTANTT*
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