mRNA_H-elongata_contig1565.3682.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig1565.3682.1 vs. uniprot
Match: A0A6H5KRF7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRF7_9PHAE) HSP 1 Score: 490 bits (1261), Expect = 3.080e-162 Identity = 325/687 (47.31%), Postives = 401/687 (58.37%), Query Frame = 1
Query: 13 ELGGSNLVGVRHLREEHQRRQLPRRAHQT-PETTD------YD------VDARQSTRALRVSPRQIRRIEDTHAYLCAKVDPIMGPLILALVSDKPQNVREAALNHILSKKNKQIESGNIDSETFTRRTDSSEIGVQSEVDTNGSKDRGGGKASGTQREVGREDRVFMAREVGPLVSALINRALRFMPADVEEFLIEELQNGNFSTESNTGGASKHYSSLKTSTANDYNSHAHTPDNKGCNEYSN------------QGHQKHRPSSARSRLQQAKGLDRHVQQTAPLLSARAVERESHRLSRATGSVSFGEEPSL----LGAES----GGGGTKVGKIQESRDKPWDAEMSSTAT-------------------------------VLPTEVPSPGAC-------ETRENKAPQVD------------VVVLLLGLDAAGKTTMLGTLQGEKDPRVCPTVGFKPVTMLLNDQLMKVKFYDLGGGKKIRRIWDKYYHDAHALIYVVDGADGARWEETKELFLAATSHKYLRGKPVAVIVNKEDAGVQIRPSIVAEELRLSAREDAQVWSCSINVVNAKGGVLDNRLEKAVGWLLENVKGRFAKLNERVQHDIIDMEREFQLEKERKQLDVMRGLLRNTFLEDEEAARGEHFDETQGLEFLASELGLEVEHLPADGANVAALVGYQKL 1824
E+ GS L GVR L E ++R+ PR A T P D +D V+ RA RVSPRQ RRIEDTHAYLC+KVDP+MG LIL L+ +P+ +R+AAL+H+L KK ++ + D R + + +G + +A+ +R +DRVFMAREVGPLV+ LI R LR MPADVE FLIE+L+ +GGA ND N P G S Q H RPS+ARSRLQQA+ LD VQQT+P LS R R S R S F +E L +G ES GGG V ++ES +KPWD E + T +PT PS + ++ N P D V+LLLGLD AGKTT+LGTLQGE++PRV P+VGFKPVTM+L+D+L KVKFYDLGGGK IR IW+KYYHDAH L+YVVDGADG RW ++K++F AATSHKYL+GKP+A+I+NKEDAG+QIR A +L LS R DA+V CS+N A GGV D RLE AV WLLE + F LNERVQHD+ DMEREFQLEKERKQL VMRGLLR F + E R + FDE++GLEFL SE+GLE L A+GA +A+LVGYQK+
Sbjct: 3 EMSGSGLAGVRRLHNEREKRRRPRTATTTRPRAVDAAGGCSHDNARSTFVEEPPRARAPRVSPRQRRRIEDTHAYLCSKVDPVMGSLILVLMESRPEEIRKAALDHLLFKK--RMREASADDTGVGRAAGGNATAADPQQYISGIEVEEE-EAAQRRRLARHQDRVFMAREVGPLVTELIRRTLRSMPADVELFLIEQLKGVP------SGGACDQ-------DMNDNNDRLAFPPPNGAEPISRSSKQHQIGHRSGQPHWPGRPSTARSRLQQAQSLDLQVQQTSPPLSGRTEARRSPSHPRGPQSGGFPDEDDLGADGVGGESSRPGGGGRAVVDGVKESLNKPWDVESLESITHDHWRWLHRRCILPDPAITAPTVQGSNYIQLTVPTTPPSSTSSIVHGLQISSKLNTMPFEDQPRAPSKPKQKLAVILLLGLDGAGKTTLLGTLQGEQNPRVRPSVGFKPVTMMLSDEL-KVKFYDLGGGKNIRSIWNKYYHDAHGLLYVVDGADGDRWGQSKDIFFAATSHKYLQGKPLALILNKEDAGLQIREEKAAADLGLSNRRDAKVCHCSVNASKAAGGVPDERLEGAVEWLLETINESFPALNERVQHDLQDMEREFQLEKERKQLQVMRGLLRKAFPQVEGGEREDCFDESEGLEFLTSEVGLEPGTLDAEGAEIASLVGYQKV 672
BLAST of mRNA_H-elongata_contig1565.3682.1 vs. uniprot
Match: D7FT62_ECTSI (ARL13, ARF-like Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT62_ECTSI) HSP 1 Score: 480 bits (1236), Expect = 4.280e-159 Identity = 302/601 (50.25%), Postives = 369/601 (61.40%), Query Frame = 1
Query: 13 ELGGSNLVGVRHLREEHQRRQLPRRAHQT-PETTDYD------------VDARQSTRALRVSPRQIRRIEDTHAYLCAKVDPIMGPLILALVSDKPQNVREAALNHILSKKNKQIESGNIDSETFTRRTDSSEIGVQSEVDTNGSKDRGGGKASGTQREVGREDRVFMAREVGPLVSALINRALRFMPADVEEFLIEELQNGNFSTESNTGGASKHYSSLKTSTANDYNSHAHTPDNKGCNEYSNQGHQKH------------RPSSARSRLQQAKGLDRHVQQTAPLLSARAVERESHRLSRATGSVSFGEEPSLLGAESGGGGTKVGKI--------QESRDKPWDAEMSSTATVLPTEVPSPGACETRENKAPQVDVVVLLLGLDAAGKTTMLGTLQGEKDPRVCPTVGFKPVTMLLNDQLMKVKFYDLGGGKKIRRIWDKYYHDAHALIYVVDGADGARWEETKELFLAATSHKYLRGKPVAVIVNKEDAGVQIRPSIVAEELRLSAREDAQVWSCSINVVNAKGGVLDNRLEKAVGWLLENVKGRFAKLNERVQHDIIDMEREFQLEKERKQLDVMRGLLRNTFLEDEEAARGEHF 1716
E+ GS L GVR L E ++R+ PR A T P D V+A RA RVSPRQ RRIEDTHAYLC+KVDP+MG LIL L+ +P+ +R+AAL+H+LSKK ++ + D R + + D GS+ +A+ +R +DRVFMAREVGPLV+ LI R LR MPADVE FLIE+L+ +GGA ND N P G S Q H RPS+ARSRLQQA+ LD HVQQT+P LS R R S R + +E L GG ++ G +ES +KPWD E+SS + P E C+ ++ A V+LLLGLD AGKTT+LGTLQGE+DPRV P+VGFKPVTM+L+D+L KVKFYDLGGGK IR IWDKYYHDAH L+YVVDGADG RW ++K++F AATSHKYL+GKP+AVI+NKEDAG+QIR A +L LS+R DA+V CS+N A+GGV D RLE AV WLLE + F LNERVQHD+ DMEREFQLEKERKQL VMRGLLR F + E +G HF
Sbjct: 3 EMSGSGLAGVRRLHNEREKRRRPRTATTTRPRALDAAGGCSHGNARSTFVEAPPRARAPRVSPRQRRRIEDTHAYLCSKVDPVMGSLILVLMESRPEEIRKAALDHLLSKK--RMREASADDARVGRAAGGNPTTADPKQDVCGSEVEEE-EAAQRRRLARHQDRVFMAREVGPLVTELIRRTLRSMPADVELFLIEQLKGVP------SGGACDQ-------DMNDNNHRLAFPPPDGAEPISRSSKQHHLGNRSGQPHRPTRPSTARSRLQQAQSLDLHVQQTSPPLSGRTEARRSPSPPRGPQNGGLPDEDDLGSGGVGGESSRPGXXXXAVVDGAKESLNKPWDVEVSSKLNIPPFEDQPREPCKPKQKVA-----VILLLGLDGAGKTTLLGTLQGEQDPRVRPSVGFKPVTMMLSDEL-KVKFYDLGGGKNIRSIWDKYYHDAHGLLYVVDGADGDRWGQSKDMFFAATSHKYLQGKPLAVILNKEDAGLQIREEKAAADLGLSSRRDAKVCHCSVNASKAEGGVPDERLEGAVEWLLETINESFPALNERVQHDLQDMEREFQLEKERKQLQVMRGLLRKAFPQVEMLQKGWHF 581
BLAST of mRNA_H-elongata_contig1565.3682.1 vs. uniprot
Match: A0A835Z0A9_9STRA (ADP-ribosylation factor family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0A9_9STRA) HSP 1 Score: 236 bits (603), Expect = 9.660e-63 Identity = 226/755 (29.93%), Postives = 317/755 (41.99%), Query Frame = 1
Query: 31 LVGVRHLREEHQRRQLPRRAHQTPETTDYDVDARQSTRALRVSP--RQIRRIEDTHAYLCAKVDPIMGPLILALVSDKPQNVREAALNHILSKKNKQIESGNIDSETFTRRTDSSEIGVQSEVDTNGSKDRGGGKASGTQREVGREDRVFMAREVGPLVSALINRALRFMPADVEEFLIEELQNGNFSTESNTGGASKHYSSLKTSTANDYNSHAHTPDNKGCNEYSNQGHQKHRPSSARSRLQQAKGLDRHVQQTAPLLSARAVERE------------SHRLSRATGSVSFGEEPSLLGAESGGGGTKVGKIQESRDKPWDAEMSSTATVLPTEVPSP------GACETRENKAPQVD-----VVVLLLGLDAAGKTTMLGTLQGEKDPRVCPTVGFKPVTMLLNDQLMKVKFYDLGGGKKIRRIWDKYYHDAHALIYVVDG-ADGA-RWEETKELFLAATSHKYLRGKPVAVIVNKEDAGVQIRPSI-------VAEELRLSAREDAQVWSCSINVVNAKGG-----------------------------VLDNRLEKAVGWLLENVKGRFAKLNERVQHDIIDMEREFQLEK---------------------------------------------------------------------------------ERKQLDVMRGLLRNTFLEDEEAARGEHFDETQGLEFLASELGLE--VEHLPADGANVAALVGYQKLALQMVGNMKSP 1857
L G+R LR + R A + D + S + P RQ RR+EDTH YL +KVDP+M I L+ +PQ+VR A L++ ++++ + + RR E+G+ R + DR++MARE+GP+V+ LIN LR P DVE FLI +LQ+ GAS P + RPS+ARSRL A+ LD + PLL+ A ++ + +P GG + ++ES+ + WD +S+ A VLP P+P AC A +LLLGLD +GKTT+L TLQG+ PR PTVGF P T+ L L +VK YDLGGG +IR IW Y+ D HA+++++D A+GA RW E + LFL +H YL KPV V+ NK DAG + + VA EL+L+ A+V CS + A +D LE A+ WLLE+V+ L RV D+ DM+ +F+ + E K+L V+R +LR F D A + + F + +GL+FLASE+G + LPA VAAL+GYQKLALQM GNM++P
Sbjct: 12 LAGIRQLR-------IARGAAAQENSVDNSRPSTASAAGVECRPFHRQRRRVEDTHKYLTSKVDPVMSDAITYLLFARPQDVRRAMLDYFVARRAAR--------DNNNRRLSFRELGL-------------------APRAAQKHDRLYMAREIGPVVAHLINAVLRRAPDDVEAFLIGQLQD---MLRLPRDGAS-------------------VPAPPATS----------RPSTARSRLALAQELDTAAE---PLLARSASGKKVTPTAXXXXXXXXXXXXXXXXXXTLAPKPPETAPSLGGKRSSSYGVRESKTEHWDLSVSAAAPVLP---PTPLTDAQLTACSGGSGTAXXXXXXXKLACLLLLGLDGSGKTTLLRTLQGDPAPRTQPTVGFAPATLALTPAL-RVKLYDLGGGARIRGIWQNYFQDCHAVVWMLDASAEGAERWHEARALFLETMAHPYLVQKPVLVLCNKADAGARCDANAAVTDAIKVASELKLADVTSARVARCSAHSAKAXXXXXXXXXXXXXXXXXXXAQPEASTADGEHVAMDKPLEAALEWLLEHVRANHGALQRRVAADVADMDAQFEAQXXXXXXXXXXXXXXXXXXXVREQWCQLCAAEPRMWTQLLSSCSRXXXXXXXXXXNMQLVSGCGARACCRAASVSAVTERCNTEAKKLSVLRTVLRKAFPADGTAPQ-DTFPQAEGLDFLASEVGQQGGAAALPAPARRVAALLGYQKLALQMAGNMRAP 692
BLAST of mRNA_H-elongata_contig1565.3682.1 vs. uniprot
Match: A0A7S2XZ45_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ45_9STRA) HSP 1 Score: 181 bits (458), Expect = 5.360e-49 Identity = 101/242 (41.74%), Postives = 137/242 (56.61%), Query Frame = 1
Query: 1213 GGKKIRRIWDKYYHDAHALIYVVDGADGARWEETKELFLAATSHKYLRGKPVAVIVNKEDAGVQI-RPSIVAEELRLSAREDAQVWSCSINVVNAKGGVLDNRLEKAVGWLLENVKGRFAKLNERVQHDIIDMEREFQLEKERKQLDVMRGLLRNTFLEDEEAARGEHFDETQGLEFLASELGLEVEHLPADGANVAALVGYQKLALQMVGNMKSPISRRNQERTWNEIQELVVSLRREIGI 1935
GG+K+R W Y+HD H +IY+VDG+ RWEE + A SHKYL KP+ V++NK D G + VA+ L L ++ V + N+ V+D R E + WL E + F LN RV D DM+ EF+ +KE K L V R L F +D F+E +GLEF+A E+ V++LP + ALVGYQKLALQM+G+MK PIS++NQ W I E V R E+G+
Sbjct: 1 GGRKVRPTWKNYFHDVHGVIYMVDGSSTERWEEAQTELQGAKSHKYLMDKPLLVMLNKADQGEALGSQQEVAQMLGLGGQDITSVQTVIARGANSDN-VIDPRAESGLEWLFEKILSNFESLNARVAQDFEDMQAEFERQKEEKNLKVFRAQLEKAFPKDGGEKDESCFEEGEGLEFIAGEIDDTVDNLPPIAKEICALVGYQKLALQMIGSMKLPISKKNQPMEWEAILEYVNERRAEVGL 241
BLAST of mRNA_H-elongata_contig1565.3682.1 vs. uniprot
Match: A0A7S3HGU3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HGU3_9STRA) HSP 1 Score: 184 bits (466), Expect = 1.750e-47 Identity = 120/347 (34.58%), Postives = 189/347 (54.47%), Query Frame = 1
Query: 940 RDKPWDAEMSSTATVLPTEVPSPGACETRENKAPQVDVVVLLLGLDAAGKTTMLGTLQGEKDPRVCPTVGFKPVTMLLNDQLMKVKFYDLGGGKKIRRIWDKYYHDAHALIYVVDGAD-GARWEETKELFLAATSHKYLRGKPVAVIVNKEDAGVQIRPSIV-AEEL---RLSAREDAQVWSCSINVVNAKGGVLDNRLEKAVGWLLENVKGRFAKLNERVQHDIIDMEREFQLEKERKQLDVMRGLLRNTFLEDE----------EAARGEHFDETQGLEFLASELGLEVEHLPADGANVAALVGYQKLALQMVGNMKSPISRRNQERTWNEIQELVVSLRREIGI 1935
+D + +S++ PT +P P +E + ++ + +LGL AGK+++L LQG+ DP++ PT+GF+PV+M+L++ KV+FYDLGGGKKIR IW++Y+HD H +IYV+D + ++F +H L GKP+ V+ NK+D Q S+ +EL + + + + CS +V D R+E + L V F L+ RVQ D E ++ K+ V++ + + F++ EA F E GL +LASE+G +VE L VAA VGYQKLAL ++G +K+P+S++ W EI LV LR+E+G+
Sbjct: 140 KDVAPNVPATSSSAAAPTALP-PVVHSHQEER----NIQIAVLGLGGAGKSSILNMLQGKHDPKIRPTIGFRPVSMMLSEDT-KVRFYDLGGGKKIRDIWNQYFHDVHGVIYVIDSTTPDEEIQACMDVFSHTVNHDCLAGKPLMVLGNKQDH--QSAKSVYDLQELFQPLVQHTQGVEFFGCSAHVEPEAEVEADPRIEACLLRLFAQVNDNFHALSSRVQSDSKRKAEEEVAKRIAKERKVLKNKIASAFIDTADPEYIAAHQIEAEPANVFSEEDGLVYLASEIGEDVEGLADIAKQVAAFVGYQKLALTIIGGLKTPVSKKKTPMEWVEIHALVSELRKELGV 478
BLAST of mRNA_H-elongata_contig1565.3682.1 vs. uniprot
Match: A0A7S2G951_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G951_9STRA) HSP 1 Score: 157 bits (396), Expect = 1.700e-37 Identity = 104/300 (34.67%), Postives = 162/300 (54.00%), Query Frame = 1
Query: 1051 VVVLLLGLDAAGKTTMLGTLQGEKDPRVCPTVGFKPVTMLLNDQL-MKVKFYDLGGGKKIRRIWDKYYHDAHALIYVVDGA-DGARWEETKELF--LAATSHKYLRGKPVAVIVNKEDAGVQIRPSIVAEELRLSAREDAQVWSCSINVVNAKGGVLDNRLEKAVGWLLENVKGRFAKLNERVQHDIIDME-REFQLEKERKQLDVMRGLLRNTFLEDEEAARGEHFDETQGLEFLASELGLEVEHLPADGANVAALVGYQKLALQMVGNMKSPISRRNQERTWNEIQELVVSLRREIGI 1935
+ V + GL AGK+TM+ L G+ DP+ T+GF+ M + + +K+ FYD+ G +++ W+ Y D H IYVVD A D A+W ++ + A K++ GKP+ V+ NK+D P V+EEL L+ RE +V + + G +D R E+ + W+++ +KGR+ +L ERV D + E EF+ + ER++ V +LRN EE E GLEF+A E G E LP + LV K+AL M G +K P+S++ ++ +W+EI V R E G+
Sbjct: 235 LTVGVFGLTGAGKSTMVVALNGDPDPKPTKTIGFRRHNMTIGGDVDVKIVFYDMPGS--MQKKWEGYTTDVHGAIYVVDAAADEAQWAKSVAAYKKFDAECAKFVDGKPMLVVANKQDLESARSPEAVSEELGLAGREHTEVLGVTAHPKRHTTGEVDERAERGLMWVVDAIKGRYDELRERVVKDEANREAEEFKAKLEREKR-VFCTILRNKAF-PEEGEPVECMSLEDGLEFIADETGELQEELPPVVEQICRLVNNHKVALTMCGGLKKPVSKKKKKHSWDEIIAYVKERRAEAGL 530
BLAST of mRNA_H-elongata_contig1565.3682.1 vs. uniprot
Match: A0A7S2KNP1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KNP1_9STRA) HSP 1 Score: 150 bits (378), Expect = 6.690e-36 Identity = 102/316 (32.28%), Postives = 166/316 (52.53%), Query Frame = 1
Query: 1024 RENKAPQVDVVVLLLGLDAAGKTTMLGTLQGEKDPRVCPTVGFKPVTMLLNDQLMKVKFYDLGGGKKIRRIWDKYYHDAHALIYVVDGADGAR-WEETKELFLAATSHKYLRGKPVAVIVNKEDAGVQIRPSIVAEELRLSARE---DAQVWSCSI---NVVNAKGGVLDNRLEKAVGWLLENVKGRFAKLNERVQHDIIDMEREFQLEKERKQLDVMRGLL--------RNTFLEDEEAARGEHFDETQGLEFLASELGLEVEHLPADGANVAALVGYQKLALQMVGNMKSPISRRNQERTWNEIQELVVSLRRE 1926
R+ P +++VV+ GL GK+T+L L+G++ P+ PT GF PV M ND V+FYDLGGGK +RRIW+ Y+HD HA+IYV D + ++E+ +F + H+YL GKP+ +K D + S E++R V S+ VN + +LD+ + + + E+++ L R+ D ++ + + K K+ VM+ L+ FL D + E G EFL++E+GL L +G A+LVGY +LAL M+GNM PI++ +++ W ++ + + +R E
Sbjct: 116 RQQYPPNMNIVVV--GLAGVGKSTLLAALKGKETPKHKPTRGFCPVKMKFNDST--VQFYDLGGGKNMRRIWENYFHDVHAIIYVFDASSSNETFKESMRVFESTIGHRYLVGKPLLCFCSKVD----VLGSRDIEDIRSEVHTIITPCLVTGASLYPQERVNLRESMLDDAIMNLLNLIAEDIES----LENRISRDTMEEQAQILHAKAEKERQVMKTLMCKRLDCGAGGNFLNDPDFLGKE-----AGEEFLSNEVGLNRSELCEEGKRCASLVGYHRLALMMIGNMIKPINKASKKWCWLDVIDYIEGIRSE 414
BLAST of mRNA_H-elongata_contig1565.3682.1 vs. uniprot
Match: A0A7S4EEB8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EEB8_9STRA) HSP 1 Score: 140 bits (353), Expect = 8.640e-32 Identity = 99/301 (32.89%), Postives = 154/301 (51.16%), Query Frame = 1
Query: 1057 VLLLGLDAAGKTTMLGTLQGEKDPRVCPTVGFKPVTMLLNDQLMK------VKFYDLGGGKKIRRIWDKYYHDAHALIYVVD-GADGARWEETKELFLAATSHK------YLRGKPVAVIVNKEDAGVQIRPSIVAEELRLSA--REDAQVWSCSI-NVVNAKGGVLDNRLEKAVGWLLENVKGRFAKLNERVQHDIIDMEREFQLEKERKQLDVMRGLLRNTFLEDEEAARGEHFDETQGLEFLASELGLEVEHLPADGANVAALVGYQKLALQMVGNMKSPIS-RRNQERTWNEIQELV 1908
+ +LG ++GKTT+L +QG+ +P P+ GFK T L QL + + F+D+ G K R W Y+ D HA+++VVD +D A + AT+ L+GKP+ V+ NK+D +P V++ L L A R+ V C + G LD R+E+A+ WL + + + L R + + QL+KE+K+ V R +LR ++ E E DE++GLEF ASELG +E + +AAL+ YQKLALQM M P++ ++ W ++ V
Sbjct: 206 IFVLGDVSSGKTTLLKAMQGDLEPSAKPSGGFK--TFDLGHQLSEDAPQSTLTFFDVSGKTKARARWPAYFSDCHAVVFVVDCSSDLAEARTCFDYCFRATNENEDERRSMLKGKPLLVLANKQDIESSAKPDEVSKALDLDAYQRDGYHVAVCPVVGDPQKSNGALDPRVERAIDWLAQRIDDKAGALEARRTRETAATDAWDQLQKEKKEQRVFRKVLRKAHPQEGEPE--ECMDESEGLEFFASELGCTIEDMDPTAKRLAALMNYQKLALQMTAAMNQPVNPKKRAPMAWPDVAAYV 502
BLAST of mRNA_H-elongata_contig1565.3682.1 vs. uniprot
Match: A0A7S1CG51_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CG51_9STRA) HSP 1 Score: 138 bits (348), Expect = 2.470e-31 Identity = 72/184 (39.13%), Postives = 112/184 (60.87%), Query Frame = 1
Query: 1051 VVVLLLGLDAAGKTTMLGTLQGEKDPRVCPTVGF-KPVTMLLNDQLMKVKFYDLGGGKKIRRIWDKYYHDAHALIYVVDGADGARWEETKELFLAATSHKYLRGKPVAVIVNKEDAGVQIRPSIVAEELRLSA-REDAQVWSCSINVVNAKGGVLDNRLEKAVGWLLENVKGRFAKLNERVQHD 1596
+ V+L+GLD AGKTT+L +G+K+P + PTVGF KP+ M + V YDLGGG +IR +W Y+ D H I+VVD AD AR +E K+ F+ H L+GKP+ + NK+D + + +++++ L+ + + +I GGV+D R+ + + WLL++V G + KLN RV+ D
Sbjct: 22 MTVVLIGLDNAGKTTVLADFRGDKNPYIAPTVGFSKPLEMKRGKFYVTV--YDLGGGVRIRGLWQNYFSDVHGAIFVVDSADTARMDEVKKEFVECFKHPMLQGKPILIFANKQDLPAALDEADISQQMGLNELTSSSHLVVKTIANCEKNGGVIDERIFEGLNWLLKSVTGDYKKLNTRVKSD 203
BLAST of mRNA_H-elongata_contig1565.3682.1 vs. uniprot
Match: UPI001E687D89 (ADP-ribosylation factor-like protein 13B isoform X1 n=2 Tax=Maniola TaxID=111919 RepID=UPI001E687D89) HSP 1 Score: 132 bits (333), Expect = 2.120e-29 Identity = 78/189 (41.27%), Postives = 105/189 (55.56%), Query Frame = 1
Query: 1051 VVVLLLGLDAAGKTTMLGTLQGEKDPRVCPTVGFKPVTMLLNDQLMKVKFYDLGGGKKIRRIWDKYYHDAHALIYVVDGADGARWEETKELFLAATSHKYLRGKPVAVIVNKEDAGVQIRPSIVAEELRLSA-----REDAQVWSCSINV-VNAKGGVLDNRLEKAVGWLLENVKGRFAKLNERVQHDI 1599
+V++L+GLD AGKT + L GEKD +V PTVGFK V ++ D V YDLGGG R+IW +YY + H +I+V+D +D AR EE K + SH + GKPV V+ NK+D + V E+L + R V S S VN+K +D L K WLL + R+ +N RVQ DI
Sbjct: 16 IVLILIGLDNAGKTKTVNNLAGEKDDKVLPTVGFKAVNLIHKDT--PVTIYDLGGGPHFRQIWPQYYSEVHGVIFVIDSSDFARLEECKSVLEEVLSHDKISGKPVLVLANKQDKSGALDDIDVVEKLNIEPLVNRYRCPTLVESYSATPDVNSKKPKIDPGLRKGYHWLLNYIVKRYGDINLRVQTDI 202 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1565.3682.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1565.3682.1 >prot_H-elongata_contig1565.3682.1 ID=prot_H-elongata_contig1565.3682.1|Name=mRNA_H-elongata_contig1565.3682.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=648bp MCSTELGGSNLVGVRHLREEHQRRQLPRRAHQTPETTDYDVDARQSTRALback to top mRNA from alignment at H-elongata_contig1565:6101..10701- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig1565.3682.1 ID=mRNA_H-elongata_contig1565.3682.1|Name=mRNA_H-elongata_contig1565.3682.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4601bp|location=Sequence derived from alignment at H-elongata_contig1565:6101..10701- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig1565:6101..10701- >mRNA_H-elongata_contig1565.3682.1 ID=mRNA_H-elongata_contig1565.3682.1|Name=mRNA_H-elongata_contig1565.3682.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3888bp|location=Sequence derived from alignment at H-elongata_contig1565:6101..10701- (Himanthalia elongata Himel1 dioecious)back to top |