prot_H-elongata_contig155962.3656.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig155962.3656.1
Unique Nameprot_H-elongata_contig155962.3656.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length144
Homology
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BLAST of mRNA_H-elongata_contig155962.3656.1 vs. uniprot
Match: D8LAZ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAZ1_ECTSI)

HSP 1 Score: 189 bits (479), Expect = 8.500e-53
Identity = 99/143 (69.23%), Postives = 109/143 (76.22%), Query Frame = 0 
Query:    1 PPSPTGGREVWMGTDDVPSVGAGGGWEEEEGAEGLFHDAQDVPIPTLSVYDPERLWEYVERPLMVYMPLRKLVVKPPTVSTTMDIEELPVRCLVHRTLAGTEVATRLVDSPAERYRAAFAFIYMVTAESQEHYKQVCTCLFMA 143
            PP+  G RE  +G  D      G         +GLFHDAQDVP+PTLSVYDPERLWEYVERPLMVYMPLRKL+ KPP VS   +I+ELPVRCLVHRTLAGTEVA RLVD+PAERYRA+FAFIYMV+AESQEHYKQ    L  A
Sbjct:  119 PPTGHGPREFTLGAMD-----GGEXXXXXXXXDGLFHDAQDVPMPTLSVYDPERLWEYVERPLMVYMPLRKLLAKPPAVSGPTNIDELPVRCLVHRTLAGTEVAARLVDTPAERYRASFAFIYMVSAESQEHYKQTVRPLIRA 256
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig155962.3656.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LAZ1_ECTSI8.500e-5369.23Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig155962contigH-elongata_contig155962:23..1004 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig155962.3656.1mRNA_H-elongata_contig155962.3656.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig155962 23..1004 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig155962.3656.1 ID=prot_H-elongata_contig155962.3656.1|Name=mRNA_H-elongata_contig155962.3656.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=144bp
PPSPTGGREVWMGTDDVPSVGAGGGWEEEEGAEGLFHDAQDVPIPTLSVY
DPERLWEYVERPLMVYMPLRKLVVKPPTVSTTMDIEELPVRCLVHRTLAG
TEVATRLVDSPAERYRAAFAFIYMVTAESQEHYKQVCTCLFMA*
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