mRNA_H-elongata_contig15593.3654.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig15593.3654.1 vs. uniprot
Match: D7FI10_ECTSI (DNA polymerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI10_ECTSI) HSP 1 Score: 992 bits (2564), Expect = 0.000e+0 Identity = 502/616 (81.49%), Postives = 543/616 (88.15%), Query Frame = 1
Query: 1 DDGDGGANGGGQKLPSLPADGLEMGVLPRVIRTLVERRAVVKKMLKKEKARSDVTRKQELDIRQKALKLTANSMYGCLGFSFSRFYAKPIAALVTAQGRESLQRTVDLAEEQLGLEVIYGDTDSVMINTHSTDLKQASIVKEIGNRVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVEHPDGTVTYDKEMKGLDLVRREWCVLSKDTGKFVLDRILSGDAREAVVASIHEHLEALAASMRAGEVPVQRYVITKGLNKAPHEYPDAKSQPHVQVALAMMKAGKSVNVGHHIPYVMCKILGATSPAGKARHPDDVLRSNGQLEVDVEWYLSQQIVPPVSRLCEPIEGTSVALLAEKMGLDASKFASHVSVNGGNEQDDWAFTPTSRLPDAERFRGVEPLRMTCCACREEADFQGVFAWDRKKPVNGPSDIKASPADAEWAAELHPISGLSCPNPACGALYWGAGSEAGCVSTLCQRLTLAVRGHLRVYYQTQLRCDDSSCGLRTRSAGVMGVACPARGCQGRLVREYSDKALYDQLKFYETLFDVKRAQTKVSELFNFAAEDLTVPPEHRQILGLVQHLIKDNVKSSGYNWIRPSLWSSMFTSQAYPRAINA 1848
D+ DG A G KLP LPA+G+++GVLPRVIRTLVERR+VVKKMLKKEK D +RKQELDIRQKALKLTANSMYGCLGFSFSRFYAKPIAALVTAQGRESLQRTVDL+E QLGLEVIYGDTDSVMINTHSTDLKQ VK+IGN+VKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVEHPDG++TYDKEMKGLDLVRREWC LSKDTGKFVLDR+LSG+ARE VV IH+HLEALAASMRAGEV V RYVITKGLNKAPHEYPDAKSQPHVQVALAMMKAGKSVNVGHHIPYVMCKI GATSPA +ARHPDDVLRS G+LEVDVEWYL+QQIVPPVSRLCEPIEGTS+A+LAEKMGLDASKF SH + GG++ DDWAFTPTS+LPDAERFRGVEPL+MTC AC E+A+FQGVF+WDRKK VNGP+D++ GL CPN ACGA YWGAGSEA CVSTL QRLTLAVR HL+VYYQT LRCDDSSCGL TRS GVMGVACPA+GCQGRLV+EY DK LYDQLK++ETLFDV RAQTKVSELFNF DL V PEHRQIL LV I+D+V+SSGYNWIRPSLWSS+FTS A P AI +
Sbjct: 1017 DEDDGAAASAGPKLPDLPAEGMDIGVLPRVIRTLVERRSVVKKMLKKEK---DPSRKQELDIRQKALKLTANSMYGCLGFSFSRFYAKPIAALVTAQGRESLQRTVDLSENQLGLEVIYGDTDSVMINTHSTDLKQ---VKDIGNQVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVEHPDGSITYDKEMKGLDLVRREWCTLSKDTGKFVLDRVLSGEARETVVTGIHDHLEALAASMRAGEVEVPRYVITKGLNKAPHEYPDAKSQPHVQVALAMMKAGKSVNVGHHIPYVMCKIEGATSPAERARHPDDVLRSGGKLEVDVEWYLNQQIVPPVSRLCEPIEGTSMAVLAEKMGLDASKFTSHANAAGGDDGDDWAFTPTSKLPDAERFRGVEPLKMTCRACHEQAEFQGVFSWDRKKAVNGPADLRP---------------GLMCPNSACGAYYWGAGSEAACVSTLYQRLTLAVRRHLKVYYQTHLRCDDSSCGLLTRSTGVMGVACPAKGCQGRLVQEYPDKTLYDQLKYFETLFDVDRAQTKVSELFNFKETDLPVSPEHRQILSLVGRRIQDDVQSSGYNWIRPSLWSSVFTSHALPPAIKS 1611
BLAST of mRNA_H-elongata_contig15593.3654.1 vs. uniprot
Match: A0A4D9CVK1_9STRA (DNA polymerase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVK1_9STRA) HSP 1 Score: 663 bits (1711), Expect = 1.210e-216 Identity = 356/633 (56.24%), Postives = 439/633 (69.35%), Query Frame = 1
Query: 28 GGQKLPSLPADGLEMGVLPRVIRTLVERRAVVKKMLKKEKARSDVTRKQELDIRQKALKLTANSMYGCLGFSFSRFYAKPIAALVTAQGRESLQRTVDLAEEQLGLEVIYGDTDSVMINTH----------------------------STDLKQASIVKEIGNRVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVEHPDGTVTYDKEMKGLDLVRREWCVLSKDTGKFVLDRILSGDAREAVVASIHEHLEALAASMRAGEVPVQRYVITKGLNKAPHEYPDAKSQPHVQVALAMMKAGKSVNVGHHIPYVMCKILGATSPAGKARHPDDVLRSNGQLEVDVEWYLSQQIVPPVSRLCEPIEGTSVALLAEKMGLDASKFASHVSVNGG---NEQDDWAFTPTSRLPDAERFRGVEPLRMTCCACREEADFQGVFAWDRKKPVNGPSDIKASPADAEWAAELHPISGLSCPNPACGALYWGAGSEAGCVSTLCQRLTLAVRGHLRVYYQTQLRCDDSSCGLRTRSAGVMGVACPARGCQGRLVREYSDKALYDQLKFYETLFDVKRAQTKVSELFNFAAEDLTVPPEHRQILGLVQHLIKDNVKSSGYNWIRPSLWSSMFTSQAYP 1833
GG +LP LP L+ G+LPRVI+TLV+RR+ VKK+LK E+ D +K++LDIRQKALKLTANSMYGCLGFS SRF+A+PIAALVTA GRE+LQRTVD+A+ QL L+VIYGDTDS+MINT D+++ VK GN VK+ VNKLYKSLEL+LDG+FK MLLLKKKKYAAL V E +GT+TY KE+KGLDLVRR+WCVLSK+TG+FV+D+ILSG+ R+AVVA+IH +LE LA MRAGEV V++Y ITKGLNKAPHEYPDAKSQPH+QVAL+MMKAGK VNVG HI YV+C+ GA + A +A PDDV S G+L+VDVEWYL+QQI+PPV+RLCEPIEGTSVA LAE++GLD S+F NGG NE + W FTP R+ D+ERF E L++ C C +EADF GV+ + V + K A SGL CPN +C ALYWGA + A C + L R+TL VR H++ YY L CDD+ C R+R V+ AC ARGC G + EYS+KAL+ QLKF ETLFDV+RA+ K E L +P H ++L L+ + V S+ YNWIRPSLWS + +P
Sbjct: 1026 GGAQLPPLPDTALDQGILPRVIKTLVDRRSSVKKLLKAER---DAAKKEQLDIRQKALKLTANSMYGCLGFSHSRFFARPIAALVTAMGRETLQRTVDVAQNQLSLDVIYGDTDSIMINTSIASRDEFDSGTMGTSDENDSVAARKLRLEKDMERIREVKAKGNLVKQAVNKLYKSLELELDGIFKCMLLLKKKKYAALTVSETAEGTLTYAKELKGLDLVRRDWCVLSKETGRFVIDQILSGENRDAVVATIHSYLEELAKRMRAGEVDVRQYAITKGLNKAPHEYPDAKSQPHLQVALSMMKAGKPVNVGDHIEYVICEKEGAKAAAERAFLPDDVKHSEGELKVDVEWYLTQQILPPVARLCEPIEGTSVATLAERLGLDKSRFGQ--GGNGGSAGNEDEAWGFTPMCRMEDSERFAACEALKVRCSHCNQEADFPGVYC-EALVAVAAAGESKGGVASTASGGLR---SGLLCPNMSCQALYWGAPNAASCFARLFNRVTLTVRLHVKKYYDCWLLCDDTGCNRRSRQQSVVATACLARGCHGHMGMEYSEKALHTQLKFLETLFDVRRAKAKKMEA---GTVPLPLPDGHVRVLDLLHEQTRQIVSSTAYNWIRPSLWSMISGGVKHP 1646
BLAST of mRNA_H-elongata_contig15593.3654.1 vs. uniprot
Match: B8LEG9_THAPS (DNA polymerase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LEG9_THAPS) HSP 1 Score: 602 bits (1552), Expect = 1.940e-198 Identity = 315/604 (52.15%), Postives = 417/604 (69.04%), Query Frame = 1
Query: 31 GQKLPSLPADGLEMGVLPRVIRTLVERRAVVKKMLKKEKARSDVTRKQELDIRQKALKLTANSMYGCLGFSFSRFYAKPIAALVTAQGRESLQRTVDLAEEQLGLEVIYGDTDSVMINTHSTDLKQASIVKEIGNRVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVEHPDGTVTYDKEMKGLDLVRREWCVLSKDTGKFVLDRILSGDAREAVVASIHEHLEALAASMRAGEVPVQRYVITKGLNKAPHEYPDAKSQPHVQVALAMMKAGKSVNVGHHIPYVMCKILGATSPAGK-------ARHPDDVLRSNGQLEVDVEWYLSQQIVPPVSRLCEPIEGTSVALLAEKMGLDASKFASHVSVNGGNEQDDWAFTPTSRLPDAERFRGVEPLRMTCCACREEADFQGVFAWDRKKPVNGPSDIKASPADAEWAAELHPISGLSCPNPACGALYWGAGSEAGCVSTLCQRLTLAVRGHLRVYYQTQLRCDDSSCGLRTRSAGVMGVACPARGCQGRLVREYSDKALYDQLKFYETLFDVKRA--QTKVSELFNFAAEDL-TVPPEHRQILGLVQHLIKDNVKSSGYNWIRPSLWSSM 1812
G +LP LP +GL+ GVLPRVI+TLV+RR VKK LK EK + +K+EL+IRQ+ALKLTANSMYGCLGFS SRFYA+PIAALVTA GRE+LQRTVDLA+ +GLEVIYGDTDS+MINT TD+ + V E+GN+VKREVNKLY +LEL++DGVF+SMLLLKKKKYAA+ + E P G + +DKEMKGLDLVRR+WC+ SK++GKFVLD+ILSG+ +E VV++IH+HLE +A MR+GE+P+ +Y+ITKGLNK P+EYPDAKS PHV VA M+K K+V++G HIPYV+ ++ P+ K ARHPD++ RSNG ++ DVEWYL+QQI+PP+SRLCEPIEGTS +LAEK+GLD+SK+ + VS N +E D +TP S LPD ERF+ VE L +TC C E A+F GVF ++ V+ + SG+SCPNP CG WG C++ + R+ L + ++YY +RCDD C L TR V C GC GR+ Y++ +L QLK++++LFD+ A Q K S+ E L ++ + L+ + ++ SGYNW+ + S+
Sbjct: 560 GDQLPPLPDEGLKRGVLPRVIKTLVDRRRNVKKFLKTEK---NAEKKEELNIRQQALKLTANSMYGCLGFSHSRFYAQPIAALVTAMGRETLQRTVDLAQTSIGLEVIYGDTDSIMINTRITDVNEYPRVLELGNQVKREVNKLYNTLELEIDGVFRSMLLLKKKKYAAVTMAEGPGGKMIFDKEMKGLDLVRRDWCIQSKESGKFVLDQILSGEEKEVVVSNIHDHLEKVAQQMRSGELPLDKYIITKGLNKHPNEYPDAKSLPHVYVAKMMLKDHKAVSIGDHIPYVITELEKEEEPSNKKTLAAERARHPDEIERSNGAMKPDVEWYLTQQILPPISRLCEPIEGTSPGILAEKLGLDSSKYNNIVSANI-DEDDIVDYTPASCLPDEERFKDVEKLVVTCSGCNESAEFPGVFRLVKENGVS------------------YCASGMSCPNPVCGRPNWGDADLESCIAKILNRMNLMKKEQQKLYYDGLVRCDDPMCNLETRQLSVYEGCCLKAGCNGRMKTVYTESSLQTQLKYFDSLFDIDHACKQLKKSQSSLTEKEMLKSLNGADKDAFQLLHGVSSCSLSKSGYNWVAADFFQSL 1141
BLAST of mRNA_H-elongata_contig15593.3654.1 vs. uniprot
Match: A0A7S2L169_9STRA (DNA polymerase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L169_9STRA) HSP 1 Score: 583 bits (1504), Expect = 4.940e-187 Identity = 308/606 (50.83%), Postives = 409/606 (67.49%), Query Frame = 1
Query: 31 GQKLPSLPADGLEMGVLPRVIRTLVERRAVVKKMLKKEKARSDVTRKQELDIRQKALKLTANSMYGCLGFSFSRFYAKPIAALVTAQGRESLQRTVDLAEEQLGLEVIYGDTDSVMINTHSTDLKQASIVKEIGNRVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVEHPDGTVTYDKEMKGLDLVRREWCVLSKDTGKFVLDRILSGDAREAVVASIHEHLEALAASMRAGEVPVQRYVITKGLNKAPHEYPDAKSQPHVQVALAMMKAGKSVNVGHHIPYVMCKILGATSPAGK-------ARHPDDVLRSNGQLEVDVEWYLSQQIVPPVSRLCEPIEGTSVALLAEKMGLDASKFASHVSVNGGNEQDDWAFTPTSRLPDAERFRGVEPLRMTCCACREEADFQGVFAWDRKKPVNGPSDIKASPADAEWAAELHPISGLSCPNPACGAL-YWGAGSEAGCVSTLCQRLTLAVRGHLRVYYQTQLRCDDSSCGLRTRSAGVMGVACPARGCQGRLVREYSDKALYDQLKFYETLFDVKRAQTKVSELFNFAAEDLTVP---PEHRQILGLVQHLIKDNVKSSGYNWIRPSLWSSMF 1815
G +LP LP + L+ GVLPRVI+TLV+RR VK+++K EK D T+K+ELDIRQ ALKLTANSMYGCLGFS SRFYA+PIAAL+TA GRE+LQRTVDL + +GL+VIYGDTDS+MINT +D+ + V E+GNRVKREVN+LYK+LEL++DGVF+SMLLLKKKKYAA+ + + P G +T+DKEMKGLDLVRR+WC+ SKD+GK++LD+ILSGD +E VV +IH+HLE +A MR+G++P+ +Y ITKGLNK P++YPDAK Q HV VA M+ SV +G HIPY++ + P+ K ARHPD++ RS G L+ DVEWYL+QQI+PP+SRLCEPIEGTS +LAEK+GLD+SK+ S +SV+ NE D +TP S LPD ERF+ VE MTC AC E A+F GVF K NG + ++ SG CPNP C WG A C + + ++ + + + YY +RCDD CGL TR V C GC GR+ YS+ L QLK++++LFD++ A ++S+ E + + + L+ D++ SGYNW+ + ++F
Sbjct: 972 GDQLPPLPDESLDRGVLPRVIKTLVDRRRAVKRLVKTEK---DQTKKEELDIRQLALKLTANSMYGCLGFSHSRFYAQPIAALITAMGRETLQRTVDLTQTTIGLDVIYGDTDSIMINTRISDVNEYDKVLELGNRVKREVNRLYKTLELEIDGVFRSMLLLKKKKYAAVTMAKGPGGKITFDKEMKGLDLVRRDWCIQSKDSGKYILDQILSGDEKEVVVNNIHDHLEKVAEKMRSGDLPLDKYTITKGLNKHPNDYPDAKGQAHVFVAKRMLAKNISVTIGAHIPYIITESEKEDGPSSKKTLAAERARHPDEIARSKGALKPDVEWYLAQQILPPISRLCEPIEGTSPGILAEKLGLDSSKYNS-ISVDI-NEDDIVDYTPASCLPDEERFKDVEKFVMTCAACDESAEFPGVFRLT-KDVENGMTFVQ---------------SGFRCPNPNCARPDNWGEEDVAFCGAKVLNKINMMKKEMQKKYYDGLVRCDDPMCGLETRQLSVCEGCCLKAGCNGRMKLVYSESTLQTQLKYFDSLFDIEHACKQLSKAKATITEKEVLKNLRKDDKSTFKLLHGFTSDSLNKSGYNWVTNQFFQTLF 1556
BLAST of mRNA_H-elongata_contig15593.3654.1 vs. uniprot
Match: B7S420_PHATC (DNA polymerase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7S420_PHATC) HSP 1 Score: 571 bits (1472), Expect = 1.840e-186 Identity = 291/607 (47.94%), Postives = 405/607 (66.72%), Query Frame = 1
Query: 40 LPSLPADGLEMGVLPRVIRTLVERRAVVKKMLKKEKARSDVTRKQELDIRQKALKLTANSMYGCLGFSFSRFYAKPIAALVTAQGRESLQRTVDLAEEQLGLEVIYGDTDSVMINTHSTDLKQASIVKEIGNRVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVEHPDGTVTYDKEMKGLDLVRREWCVLSKDTGKFVLDRILSGDAREAVVASIHEHLEALAASMRAGEVPVQRYVITKGLNKAPHEYPDAKSQPHVQVALAMMKAGKSVNVGHHIPYVMC---------KILGATSPAGKARHPDDVLRSNGQLEVDVEWYLSQQIVPPVSRLCEPIEGTSVALLAEKMGLDASKFASHVSVNGGNEQDDWA-FTPTSRLPDAERFRGVEPLRMTCCACREEADFQGVFAWDRKKPVNGPSDIKASPADAEWAAELHPISGLSCPNPAC-GALYWGAGSEAGCVSTLCQRLTLAVRGHLRVYYQTQLRCDDSSCGLRTRSAGVMGVACPARGCQGRLVREYSDKALYDQLKFYETLFDVKRAQTKVSELFNFAAEDLTVPPEHRQILGLVQHLIKDNVKSSGYNWIRPSLWSSMFTSQA 1827
LP LP + GVLPRVI++LVERR VKK+LK E ++ RK+ELDIRQKALKLTANSMYGCLGFS SRF+A+PIAAL+T+ GRE LQRTVD+A++++GL+VIYGDTDS+MINT D VKE+G RVK+EVN+LY++LEL++DG+F+SMLLLKKKKYAA V E P+G V Y +E+KGLDLVRR+WC+ SKDTG++V ++ILSG + V+ +IH HLE LA MRAG +P+++Y ITKGL+K P+EYPD KSQPHVQVA+ M+K + VN G HIPY++ K ++S A +ARHP+++LRSNG L+ DVEWYL+QQI+PPV+RLCEPIEG S +LAEK+GLDAS++ V +G + D+ +TP S L D ERF+ VE + C C E+ F GV+ + + SGL C NP C ++WG ++ C + + +++ + +R YY + +RCD+ C L TR V+G C RGC G++ +S++++Y LK+ E+LF++ A T+ ++ + + I + + ++S+G+NWI P+ W+ MF+ A
Sbjct: 558 LPDLPDTEADRGVLPRVIQSLVERRRTVKKLLKSE---TNAVRKEELDIRQKALKLTANSMYGCLGFSNSRFFAQPIAALITSMGREILQRTVDIAQQKVGLDVIYGDTDSIMINTRINDENDLPKVKELGERVKKEVNRLYRTLELEIDGIFRSMLLLKKKKYAAKTVEEGPNGEVKYGQELKGLDLVRRDWCIQSKDTGRYVTEQILSGQESDIVIENIHSHLEELATKMRAGNLPLEKYTITKGLSKHPNEYPDGKSQPHVQVAMVMLKNNRPVNTGDHIPYIITVSEEAEAEDKKPKSSSSAERARHPEEILRSNGALKPDVEWYLTQQILPPVARLCEPIEGMSQQVLAEKLGLDASRYNHAVRTSGDIDADELIDYTPASSLSDTERFKEVEKFYLHCYGCGVESQFPGVYHVVTNSQTGNQNTV----------------SGLHCTNPDCLRPMFWGHATQFECFARISNNISIWTQDVMRRYYSSTIRCDEPGCSLETRQLSVVGGVCLRRGCNGKMCSVFSERSVYTHLKYMESLFNIDHASTQWNKKKKKQDDSYALVKNDETIFKELHKVAMRGLESNGFNWISPAFWNGMFSIAA 1145
BLAST of mRNA_H-elongata_contig15593.3654.1 vs. uniprot
Match: A0A7S1BTL0_9STRA (DNA polymerase (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BTL0_9STRA) HSP 1 Score: 569 bits (1466), Expect = 1.670e-185 Identity = 301/595 (50.59%), Postives = 398/595 (66.89%), Query Frame = 1
Query: 31 GQKLPSLPADGLEMGVLPRVIRTLVERRAVVKKMLKKEKARSDVTRKQELDIRQKALKLTANSMYGCLGFSFSRFYAKPIAALVTAQGRESLQRTVDLAEEQLGLEVIYGDTDSVMINTHSTDLKQASIVKEIGNRVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVEHPDGTVTYDKEMKGLDLVRREWCVLSKDTGKFVLDRILSGDAREAVVASIHEHLEALAASMRAGEVPVQRYVITKGLNKAPHEYPDAKSQPHVQVALAMMKAGKSVNVGHHIPYVMCKILGATSPAGKARHPDDVLRSNGQLEVDVEWYLSQQIVPPVSRLCEPIEGTSVALLAEKMGLDASKFASHVSVNGGNEQDDWAFTPTSRLPDAERFRGVEPLRMTCCACREEADFQGVFAWDRKKPVNGPSDIKASPADAEWAAELHPISGLSCPNPACGALYWGAGSEAGCVSTLCQRLTLAVRGHLRVYYQTQLRCDDSSCGLRTRSAGVMGVACPARGCQGRLVREYSDKALYDQLKFYETLFDVKRAQTKVSELFNFAAEDLTVPPEHRQILGLVQHLIKDNVKSSGYNWIRPSLWSSMF 1815
G L LP +GVLPRVI+TLVERR VK M+KK D K ELD+RQ+ALKLTANSMYGCLGFS SRFYA+PIAALVTA GRE LQR V++A++ +GLEVIYGDTDS+MINT D + V+E+G RVKREVNKLY++LEL++DG+++SMLLLKKKKYAALV+ + DGT + KE+KGLDLVRR+WC+ SKD+G+FV+D+ILSG RE V+ +IH HLE LA MR E+ + +YVITK L+K P EYPDAKSQPHV VAL M+K + ++ G HIPYV+C + + A +ARHP+++ RS G L+VD+EWYL+ QI+PP+SRL EPIEGTS A +AEK+GLD+SKF HV E+ +TP S PD ERF+ L++TC C E +F GVF A + PISGL+C NPAC A WG S ++ + ++ +R H++ YY + L CDDSSCGL+T G C +GC G LV E +K L+ ++K+ E+LF ++ E FN + + E R++ + L+K+ +K + YNW+ P L+S++F
Sbjct: 581 GDILAPLPDGDAGVGVLPRVIKTLVERRRNVKNMMKKA---HDPATKNELDVRQQALKLTANSMYGCLGFSHSRFYAQPIAALVTAMGREVLQRAVEVAQDTVGLEVIYGDTDSIMINTRIRDQSELPKVRELGERVKREVNKLYRTLELEIDGIYRSMLLLKKKKYAALVM--NDDGTES--KELKGLDLVRRDWCIQSKDSGRFVIDQILSGQEREQVIDNIHRHLEELAKKMRENELALDKYVITKSLSKHPKEYPDAKSQPHVLVALDMLKNNRPISTGDHIPYVICLENESKNFAERARHPEEIERSAGALKVDIEWYLNHQILPPLSRLIEPIEGTSQATIAEKLGLDSSKFIKHVPTTY-TEETLVDYTPESSRPDRERFKDATKLQITCLKCGETNEFPGVFYTP--------------------AGDTTPISGLACTNPACSAPLWGDASHWNILTRVSNATSMLLREHVQKYYGSALVCDDSSCGLKTHQLSNFGSMCLQQGCNGHLVEECDEKFLFTEMKYAESLFSFDHGCKQLEEKFNKKELERYISKEDREVFSSLHELMKNILKLNAYNWVSPKLFSALF 1147
BLAST of mRNA_H-elongata_contig15593.3654.1 vs. uniprot
Match: K0T5T4_THAOC (DNA polymerase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T5T4_THAOC) HSP 1 Score: 560 bits (1444), Expect = 9.810e-184 Identity = 299/609 (49.10%), Postives = 408/609 (67.00%), Query Frame = 1
Query: 37 KLPSLPADGLEMGVLPRVIRTLVERRAVVKKMLKKEKARSDVTRKQELDIRQKALKLTANSMYGCLGFSFSRFYAKPIAALVTAQGRESLQRTVDLAEEQLGLEVIYGDTDSVMINTHSTDLKQASIVKEIGNRVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVV-EHPDGTVTYDKEMKGLDLVRREWCVLSKDTGKFVLDRILSGDAREAVVASIHEHLEALAASMRAGEVPVQRYVITKGLNKAPHEYPDAKSQPHVQVALAMMKAGKSVNVGHHIPYVMCKIL----GATSPAG-------KARHPDDVLRSNGQLEVDVEWYLSQQIVPPVSRLCEPIEGTSVALLAEKMGLDASKFASHVSVNGGNEQDDWAFTPTSRLPDAERFRGVEPLRMTCCACREEADFQGVFAWDRKKPVNGPSDIKASPADAEWAAELHPISGLSCPNPACGALY-WGAGSEAGCVSTLCQRLTLAVRGHLRVYYQTQLRCDDSSCGLRTRSAGVMGVACPARGCQGRLVREYSDKALYDQLKFYETLFDVKRAQTKVSELFNFAAE---DLTVPPEHRQILGLVQHLIKDNVKSSGYNWIRPSLWSSMF 1815
+LPSLP + L+ GVLPRVI++LVERR VKK +K EK D +K+EL+IRQ ALKLTANSMYGCLGF SRFYA+PIAALVTA GR++LQRTVD+ + +GL+VIYGDTDS+MINT TDL++ S V E+GN+VKREVN+LYK+LEL++DG+F+SMLLLKKKKYAAL + + P G +DKE+KGLDLVRR+WC+ SKD+GK+V+D+ILSG+ RE +V++IH+HLE +A MR+GE+ + +YVITKGLNK P+EYPD KS PHV VA M+K K+V++G HIPYV+ + G S A +ARHPD++ RS+G+L+ D++WYL+ QI+P +SRLCEPIEGTS +LAEK+GLD+SK+ + +SVN +E D +TP S LPD ERF+ VE + C +C E++F GVF +K S + + SG CPNP+C + WG C + + + L + R YY RCDD C L TR V C GC GR+ Y++ +L QLK+ ++LFD+ A+ K+ + E D ++ E + ++ ++ SGYNW+ S + ++F
Sbjct: 426 QLPSLPDESLDRGVLPRVIKSLVERRRNVKKFMKSEK---DADKKEELNIRQLALKLTANSMYGCLGFQNSRFYARPIAALVTAMGRQTLQRTVDITQTTIGLDVIYGDTDSIMINTRITDLEEYSTVLELGNKVKREVNRLYKTLELEIDGIFRSMLLLKKKKYAALTITTDGPGGKFKFDKELKGLDLVRRDWCLQSKDSGKYVIDQILSGEDRELIVSNIHDHLENVAKKMRSGELSLDKYVITKGLNKHPNEYPDGKSLPHVHVAKTMLKNHKAVSIGDHIPYVITESKDAEEGGNSAANSKKNSSERARHPDEIERSSGELKPDIDWYLNNQILPTISRLCEPIEGTSPGILAEKLGLDSSKYKA-ISVNI-DEDDIVDYTPASCLPDEERFKDVEKFNVLCSSCGTESEFPGVFRL-----------VKDSDSGMTFCQ-----SGFRCPNPSCHSPNNWGEADLFSCTAKILNGMNLLKQNVQRKYYDGLTRCDDPMCDLETRQVSVYEGCCLKAGCNGRMRTVYTESSLQTQLKYLDSLFDMAHAKKKLEGSGSTITEKEVDKSISKEDKDAFAMLHGFSGHSLNKSGYNWVSGSFFQTLF 1013
BLAST of mRNA_H-elongata_contig15593.3654.1 vs. uniprot
Match: A0A836C9W2_9STRA (DNA-directed DNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9W2_9STRA) HSP 1 Score: 542 bits (1396), Expect = 1.680e-183 Identity = 285/541 (52.68%), Postives = 366/541 (67.65%), Query Frame = 1
Query: 220 MYGCLGFSFSRFYAKPIAALVTAQGRESLQRTVDLAEEQLGLEVIYGDTDSVMINTHSTDL----KQASIVKEIGNRVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVEHPDGTVTYDKEMKGLDLVRREWCVLSKDTGKFVLDRILSGDAREAVVASIHEHLEALAASMRAGEVPVQRYVITKGLNKAPHEYPDAKSQPHVQVALAMMKAGKSVNVGHHIPYVMCKILGATSPAGKARHPDDVLRSNGQLEVDVEWYLSQQIVPPVSRLCEPIEGTSVALLAEKMGLDASKFAS----HVSVNGGNEQDDWAFTPTSRLPDAERFRGVEPLRMTCCACREEADFQGVFAWDRKKPVNGPSDIKASPADAEWAAELHPISGLSCPNPACGALYWGAGSEAGCVSTLCQRLTLAVRGHLRVYYQTQLRCDDSSCGLRTRSAGVMGVACPARGC-QGRLVREYSDKALYDQLKFYETLFDVKRAQTKVSELFNFAAEDLTVPPEHRQILGLVQHLIKDNVKSSGYNWIRPSLWSSMF 1815
MYGCLGF+ RF A+PIAALVT++GRE+LQRTVD+ + +LG+EV+YGDTDSVM+NT + DL +QAS ++ GN +KREVNKLY SLELDLDG+F++MLLLKKKKYAALVVVE+ DGT+ +E+KGLDLVRR+WC LSK+ G+ VLDRILSGDARE VV SIHEHL ALA +MRAG VP+ +YVITKGL+K P +YP+AK++PH+QVA+AM +AGK VNVG+HIPY++C+ +PA +ARHP+DV+RS G L DVEWYL+QQ+VPP++RLCEPIEGTS A++A++MGLD ++F+ N N+ +DWAFTP S + D ERF+ PLR C G S + + L WG +E C S L Q L LA+R + CDD+ CG RTR GV G ACPA GC QGRL EYS+K LY+QLK +E LFD+KRAQ + + L VP H ++L L+ K V SS YNW++P+LW+++F
Sbjct: 1 MYGCLGFTHGRFCAQPIAALVTSKGREALQRTVDVTQTELGMEVVYGDTDSVMVNTRTKDLPQAKQQASTLR--GNLIKREVNKLYSSLELDLDGIFQAMLLLKKKKYAALVVVENADGTIGVQREVKGLDLVRRDWCGLSKEAGQHVLDRILSGDARETVVESIHEHLRALADAMRAGAVPIGQYVITKGLSKPPQDYPNAKNEPHLQVAMAMQRAGKPVNVGNHIPYIICR--QTQTPAERARHPEDVMRSGGALVPDVEWYLAQQMVPPIARLCEPIEGTSAAIIAQQMGLDPARFSKGGXXXXXXNRDNDAEDWAFTPVSLMSDEERFKDCMPLRARCA---------------------GSSALTPAXXXXXXXXXL-----------------WGHRNEVACFSALVQALVLAIRAAQARAAEGWYVCDDTCCGARTRDVGVRGSACPAPGCRQGRLSPEYSEKDLYEQLKSFEALFDLKRAQKRCHDRTKLPTGQLAVPKTHERVLELLLVKAKAEVDSSDYNWVKPTLWATVF 499
BLAST of mRNA_H-elongata_contig15593.3654.1 vs. uniprot
Match: A0A8J9S0I2_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S0I2_PHATR) HSP 1 Score: 531 bits (1369), Expect = 7.510e-179 Identity = 265/561 (47.24%), Postives = 373/561 (66.49%), Query Frame = 1
Query: 178 LDIRQKALKLTANSMYGCLGFSFSRFYAKPIAALVTAQGRESLQRTVDLAEEQLGLEVIYGDTDSVMINTHSTDLKQASIVKEIGNRVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVEHPDGTVTYDKEMKGLDLVRREWCVLSKDTGKFVLDRILSGDAREAVVASIHEHLEALAASMRAGEVPVQRYVITKGLNKAPHEYPDAKSQPHVQVALAMMKAGKSVNVGHHIPYVMC---------KILGATSPAGKARHPDDVLRSNGQLEVDVEWYLSQQIVPPVSRLCEPIEGTSVALLAEKMGLDASKFASHVSVNGGNEQDDWA-FTPTSRLPDAERFRGVEPLRMTCCACREEADFQGVFAWDRKKPVNGPSDIKASPADAEWAAELHPISGLSCPNPAC-GALYWGAGSEAGCVSTLCQRLTLAVRGHLRVYYQTQLRCDDSSCGLRTRSAGVMGVACPARGCQGRLVREYSDKALYDQLKFYETLFDVKRAQTKVSELFNFAAEDLTVPPEHRQILGLVQHLIKDNVKSSGYNWIRPSLWSSMFTSQA 1827
+DIRQKALKLTANSMYGCLGFS SRF+A+PIAAL+T+ GRE LQRTVD+A++++GL+VIYGDTDS+MINT D VKE+G RVK+EVN+LY++LEL++DG+F+SMLLLKKKKYAA V E P+G V Y +E+KGLDLVRR+WC+ SKDTG++V ++ILSG + V+ +IH HLE LA MRAG +P+++Y ITKGL+K P+EYPD KSQPHVQVA+ M+K + VN G HIPY++ K ++S A +ARHP+++LRSNG L+ DVEWYL+QQI+PPV+RLCEPIEG S +LAEK+GLDAS++ V +G + D+ +TP S L D ERF+ VE + C C E+ F GV+ + + SGL C NP C ++WG ++ C + + +++ + +R YY + +RCD+ C L TR V+G C RGC G++ +S++++Y LK+ E+LF++ A T+ ++ + + I + + ++S+G+NWI P+ W+ MF+ A
Sbjct: 1 MDIRQKALKLTANSMYGCLGFSNSRFFAQPIAALITSMGREILQRTVDIAQQKVGLDVIYGDTDSIMINTRINDENDLPKVKELGERVKKEVNRLYRTLELEIDGIFRSMLLLKKKKYAAKTVEEGPNGEVKYGQELKGLDLVRRDWCIQSKDTGRYVTEQILSGQESDIVIENIHSHLEELATKMRAGNLPLEKYTITKGLSKHPNEYPDGKSQPHVQVAMVMLKNNRPVNTGDHIPYIITVSEEAEAEDKKPKSSSSAERARHPEEILRSNGALKPDVEWYLTQQILPPVARLCEPIEGMSQQVLAEKLGLDASRYNHAVRTSGDIDADELIDYTPASSLSDTERFKEVEKFYLHCYGCGVESQFPGVYHVVTNSQTGNQNTV----------------SGLHCTNPDCLRPMFWGHATQFECFARISNNISIWTQDVMRRYYSSAIRCDEPGCSLETRQLSVVGGVCLRRGCNGKMCSVFSERSVYTHLKYMESLFNIDHASTQWNKKKKKQDDSYALVKNDETIFKELHKVAMRGLESNGFNWISPAFWNGMFSIAA 545
BLAST of mRNA_H-elongata_contig15593.3654.1 vs. uniprot
Match: A0A7S3QD78_9STRA (DNA polymerase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QD78_9STRA) HSP 1 Score: 552 bits (1422), Expect = 7.700e-175 Identity = 301/614 (49.02%), Postives = 407/614 (66.29%), Query Frame = 1
Query: 37 KLPSLPADGLEMGVLPRVIRTLVERRAVVKKMLKKEKARSDVTRKQELDIRQKALKLTANSMYGCLGFSFSRFYAKPIAALVTAQGRESLQRTVDLAEEQLGLEVIYGDTDSVMINTHST--DLKQASIVKEIGNRVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVEHPDGTVTYDKEMKGLDLVRREWCVLSKDTGKFVLDRILSGDAREAVVASIHEHLEALAASMRAGEVPVQRYVITKGLNKAPHEYPDAKSQPHVQVALAMMKAGKSVNVGHHIPYVMCKIL-----GATSPAGKARHPDDVLRSNGQLEVDVEWYLSQQIVPPVSRLCEPIEGTSVALLAEKMGLDASKFASHVSVNGGNEQDDWA---FTPTSRLPDAERFRGVEPLRMTCCACREEADFQGVFAWDRKKPVNGPSDIKASPADAEWAAELHPISGLSCPNPACGALYWGAGSEAGCVSTLCQRLTLAVRGHLRVYYQTQLRCDDSSCGLRTRSAGVMGVACPARGCQGRLVREYSDKALYDQLKFYETLFDV----KRAQTKVSELFNFAAEDLTVPPEHRQ-------ILGLVQHLIKDNVKSSGYNWIRPSLWSSMF 1815
KLP +P + + GVLPRVI+TLVERR VKKMLK+EK + +KQE DIRQ ALKLTANSMYGCLGFS SRFYA+PIAAL+TA GRE+LQRTV +AE+ +GL+VIYGDTDSVMINT + D+ + V ++GN VK+EVNKLY+ LEL++DGVF+SMLLLKKKKYAA+ + EHPDG+ + KE+KGLDLVRR+WC+ SKD+GK+VLD+ILSGD RE VV+ IH +E +A MR+G++P+++YVITKGL+K P +YPD KSQPHVQVA M+KA + VN G HI YV+ + L G S A +ARHP+++ RS G L+ DVEWYLSQQI+PP+SRLCE I+GTS +++AEK+GLD +++ SV E DD A F P S L DAERF+ VE + M C C E ++ +F +G DI G C N +CGA +G S S L +++ VR H+ + + ++ C+D C L+T V G C RGC+G +V Y+ + L Q+K+ ++L D+ K+ + K E N + E + +P ++ I G + +++ ++ S YN I SL+S +F
Sbjct: 995 KLPPIPDESTKEGVLPRVIKTLVERRKAVKKMLKQEK---NADKKQEFDIRQMALKLTANSMYGCLGFSHSRFYAQPIAALITAMGRETLQRTVSIAEDTVGLDVIYGDTDSVMINTRISGKDISKLKDVYQLGNTVKKEVNKLYRKLELEIDGVFRSMLLLKKKKYAAVTITEHPDGSTSDGKEIKGLDLVRRDWCIESKDSGKYVLDQILSGDEREEVVSKIHARMEEVAKKMRSGDMPLEKYVITKGLSKHPDQYPDGKSQPHVQVARMMLKANRPVNTGDHIQYVITEPLEGQTAGKKSSADRARHPEEIQRSGGVLKPDVEWYLSQQILPPISRLCESIDGTSQSMIAEKLGLDTNRYCQKTSV----EIDDGALVDFKPASSLLDAERFKNVEKICMQCRKCNESSEINSIFTVQN----DGGKDIVRG--------------GYHCSNESCGARNFGHESAFDFFSILSNKMSALVRKHIMRHGRYEMICEDPQCSLKTYQQSVGGCVCLERGCKGTMVSLYTAQELDTQIKYLKSLVDIVHCHKQYEKKARESKNVSTEIIKLPELKKELSAGDQEIAGALHERLENTLRKSAYNMIDSSLFSRLF 1583 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15593.3654.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig15593.3654.1 >prot_H-elongata_contig15593.3654.1 ID=prot_H-elongata_contig15593.3654.1|Name=mRNA_H-elongata_contig15593.3654.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=595bp MGVLPRVIRTLVERRAVVKKMLKKEKARSDVTRKQELDIRQKALKLTANSback to top mRNA from alignment at H-elongata_contig15593:912..7434- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig15593.3654.1 ID=mRNA_H-elongata_contig15593.3654.1|Name=mRNA_H-elongata_contig15593.3654.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6523bp|location=Sequence derived from alignment at H-elongata_contig15593:912..7434- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig15593:912..7434- >mRNA_H-elongata_contig15593.3654.1 ID=mRNA_H-elongata_contig15593.3654.1|Name=mRNA_H-elongata_contig15593.3654.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3570bp|location=Sequence derived from alignment at H-elongata_contig15593:912..7434- (Himanthalia elongata Himel1 dioecious)back to top |