prot_H-elongata_contig15429.3574.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15429.3574.1
Unique Nameprot_H-elongata_contig15429.3574.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length103
Homology
BLAST of mRNA_H-elongata_contig15429.3574.1 vs. uniprot
Match: D7FRX5_ECTSI (Geranylgeranyl diphosphate reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRX5_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 3.500e-34
Identity = 60/81 (74.07%), Postives = 72/81 (88.89%), Query Frame = 0
Query:   10 SSPDTTGMEMKHRIAVVGGGPSGSCAAEILAECEDVEVTLFERKMDNAKPCGGAIPLCMIAEFDLPANIVDRKVCAVGTIS 90
            +S   +GM+MK+++AVVGGGPSGSCAAEILA+C+DV+VTLFERKMDNAKPCGGAIPLCMI EFDLP +I+DRKV  +  IS
Sbjct:   42 TSSSPSGMKMKYKVAVVGGGPSGSCAAEILADCDDVDVTLFERKMDNAKPCGGAIPLCMIDEFDLPTSIIDRKVRKMKMIS 122          
BLAST of mRNA_H-elongata_contig15429.3574.1 vs. uniprot
Match: K0T1J9_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T1J9_THAOC)

HSP 1 Score: 116 bits (290), Expect = 5.220e-31
Identity = 51/95 (53.68%), Postives = 69/95 (72.63%), Query Frame = 0
Query:    1 FLFSFILHPSSPDTTGMEMKHRIAVVGGGPSGSCAAEILAECEDVEVTLFERKMDNAKPCGGAIPLCMIAEFDLPANIVDRKVCAVGTISYQVQC 95
            F+   + H  +  ++ + MK+++AVVGGGPSG+CAAEI A+ ++++  LFERKMDNAKPCGGAIPLCMI EFD+P   VDRKV    ++S    C
Sbjct:   19 FMGQNVAHAPATSSSALSMKYKVAVVGGGPSGACAAEIFAQEKNIDTVLFERKMDNAKPCGGAIPLCMIGEFDIPETTVDRKVSTSPSVSESRWC 113          
BLAST of mRNA_H-elongata_contig15429.3574.1 vs. uniprot
Match: A0A7S2R5C4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R5C4_9STRA)

HSP 1 Score: 115 bits (288), Expect = 4.900e-30
Identity = 50/76 (65.79%), Postives = 63/76 (82.89%), Query Frame = 0
Query:   15 TGMEMKHRIAVVGGGPSGSCAAEILAECEDVEVTLFERKMDNAKPCGGAIPLCMIAEFDLPANIVDRKVCAVGTIS 90
            T ++MK+++AVVGGGPSG+CAAE+ A+ E ++  LFERKMDNAKPCGGAIPLCM+ EF LP NI+DRKV  +  IS
Sbjct:   39 TSLDMKYKVAVVGGGPSGACAAEVFAQEEGIDTVLFERKMDNAKPCGGAIPLCMVGEFGLPENIIDRKVRRMNLIS 114          
BLAST of mRNA_H-elongata_contig15429.3574.1 vs. uniprot
Match: A0A5J4YN41_PORPP (Geranylgeranyl diphosphate reductase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YN41_PORPP)

HSP 1 Score: 120 bits (300), Expect = 6.830e-30
Identity = 55/85 (64.71%), Postives = 71/85 (83.53%), Query Frame = 0
Query:    6 ILHPSSPDTTGMEMKHRIAVVGGGPSGSCAAEILAECEDVEVTLFERKMDNAKPCGGAIPLCMIAEFDLPANIVDRKVCAVGTIS 90
            +   +S +++G+EMK R+AVVGGGP+GSCAAE+LA+   ++VT+FERKMDNAKPCGGAIPLCM+ EFDLP NI+DRKV  +  IS
Sbjct:   46 VARSASKNSSGLEMKIRVAVVGGGPAGSCAAEVLAKA-GIDVTIFERKMDNAKPCGGAIPLCMVGEFDLPENIIDRKVRKMKMIS 129          
BLAST of mRNA_H-elongata_contig15429.3574.1 vs. uniprot
Match: A0A7S1E0V4_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E0V4_9STRA)

HSP 1 Score: 112 bits (279), Expect = 1.550e-29
Identity = 48/76 (63.16%), Postives = 63/76 (82.89%), Query Frame = 0
Query:   15 TGMEMKHRIAVVGGGPSGSCAAEILAECEDVEVTLFERKMDNAKPCGGAIPLCMIAEFDLPANIVDRKVCAVGTIS 90
            + ++MK+++AVVGGGPSG+CAAEI A+ + ++  LFERK+DNAKPCGGAIPLCM+ EFDLP  +VDRKV  +  IS
Sbjct:   34 SALDMKYKVAVVGGGPSGACAAEIFAQEKGIDTVLFERKLDNAKPCGGAIPLCMVGEFDLPETVVDRKVRKMNLIS 109          
BLAST of mRNA_H-elongata_contig15429.3574.1 vs. uniprot
Match: A0A7S1BKF5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BKF5_9STRA)

HSP 1 Score: 114 bits (285), Expect = 2.830e-29
Identity = 50/76 (65.79%), Postives = 63/76 (82.89%), Query Frame = 0
Query:   15 TGMEMKHRIAVVGGGPSGSCAAEILAECEDVEVTLFERKMDNAKPCGGAIPLCMIAEFDLPANIVDRKVCAVGTIS 90
            T ++MK+R+AVVGGGPSG+CAAEI A+ + ++  LFERK+DNAKPCGGAIPLCM+ EFDLP  +VDRKV  +  IS
Sbjct:   39 TALDMKYRVAVVGGGPSGACAAEIFAQEKSIDTVLFERKLDNAKPCGGAIPLCMVGEFDLPETVVDRKVRQMKLIS 114          
BLAST of mRNA_H-elongata_contig15429.3574.1 vs. uniprot
Match: A0A7S2P3F7_9STRA (Geranylgeranyl diphosphate reductase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P3F7_9STRA)

HSP 1 Score: 117 bits (293), Expect = 5.980e-29
Identity = 50/77 (64.94%), Postives = 67/77 (87.01%), Query Frame = 0
Query:   14 TTGMEMKHRIAVVGGGPSGSCAAEILAECEDVEVTLFERKMDNAKPCGGAIPLCMIAEFDLPANIVDRKVCAVGTIS 90
            T+ ++MK+R+AVVGGGPSG+CAAEI A+ +++E T+FERK+DNAKPCGGAIPLCM+ EFD+P ++VDRKV  +  IS
Sbjct:   29 TSALDMKYRVAVVGGGPSGACAAEIFAQDKNLETTMFERKLDNAKPCGGAIPLCMVGEFDIPEDVVDRKVRKMNLIS 105          
BLAST of mRNA_H-elongata_contig15429.3574.1 vs. uniprot
Match: A0A7S2N464_9STRA (Geranylgeranyl diphosphate reductase n=2 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2N464_9STRA)

HSP 1 Score: 115 bits (289), Expect = 2.420e-28
Identity = 51/81 (62.96%), Postives = 67/81 (82.72%), Query Frame = 0
Query:   10 SSPDTTGMEMKHRIAVVGGGPSGSCAAEILAECEDVEVTLFERKMDNAKPCGGAIPLCMIAEFDLPANIVDRKVCAVGTIS 90
            +S  +T +EMK+++AVVGGGPSG+CAAEI A+ + ++  LFERK+DNAKPCGGAIPLCM+ EFDLP ++VDRKV  +  IS
Sbjct:   33 TSSSSTCLEMKYKVAVVGGGPSGACAAEIFAQEKGIDTVLFERKLDNAKPCGGAIPLCMVGEFDLPESVVDRKVRKMNLIS 113          
BLAST of mRNA_H-elongata_contig15429.3574.1 vs. uniprot
Match: A0A7S2R6P8_9STRA (Geranylgeranyl diphosphate reductase (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6P8_9STRA)

HSP 1 Score: 114 bits (285), Expect = 2.750e-28
Identity = 51/81 (62.96%), Postives = 66/81 (81.48%), Query Frame = 0
Query:   10 SSPDTTGMEMKHRIAVVGGGPSGSCAAEILAECEDVEVTLFERKMDNAKPCGGAIPLCMIAEFDLPANIVDRKVCAVGTIS 90
            +S  +T ++MK+++AVVGGGPSG+CAAEI A+ + ++  LFERKMDNAKPCGGAIPLCMI EFD+P + VDRKV  +  IS
Sbjct:   36 ASSSSTSLDMKYKVAVVGGGPSGACAAEIFAQEKGIDTVLFERKMDNAKPCGGAIPLCMIGEFDIPESTVDRKVRRMKLIS 116          
BLAST of mRNA_H-elongata_contig15429.3574.1 vs. uniprot
Match: A0A7S0CD57_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CD57_9STRA)

HSP 1 Score: 111 bits (277), Expect = 4.060e-28
Identity = 48/76 (63.16%), Postives = 62/76 (81.58%), Query Frame = 0
Query:   15 TGMEMKHRIAVVGGGPSGSCAAEILAECEDVEVTLFERKMDNAKPCGGAIPLCMIAEFDLPANIVDRKVCAVGTIS 90
            + + M +++AVVGGGPSG+CAAEI A+ ++++  LFERKMDNAKPCGGAIPLCMI EFD+P  +VDRKV  +  IS
Sbjct:   55 SALSMNYKVAVVGGGPSGACAAEIFAQEQNIDTVLFERKMDNAKPCGGAIPLCMIGEFDMPETVVDRKVRKMNLIS 130          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15429.3574.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRX5_ECTSI3.500e-3474.07Geranylgeranyl diphosphate reductase n=2 Tax=Ectoc... [more]
K0T1J9_THAOC5.220e-3153.68Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2R5C4_9STRA4.900e-3065.79Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A5J4YN41_PORPP6.830e-3064.71Geranylgeranyl diphosphate reductase n=1 Tax=Porph... [more]
A0A7S1E0V4_9STRA1.550e-2963.16Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A7S1BKF5_9STRA2.830e-2965.79Hypothetical protein (Fragment) n=2 Tax=Corethron ... [more]
A0A7S2P3F7_9STRA5.980e-2964.94Geranylgeranyl diphosphate reductase n=1 Tax=Lepto... [more]
A0A7S2N464_9STRA2.420e-2862.96Geranylgeranyl diphosphate reductase n=2 Tax=Litho... [more]
A0A7S2R6P8_9STRA2.750e-2862.96Geranylgeranyl diphosphate reductase (Fragment) n=... [more]
A0A7S0CD57_9STRA4.060e-2863.16Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13450NAD_binding_8coord: 25..53
e-value: 3.5E-5
score: 24.0
NoneNo IPR availablePANTHERPTHR42685:SF3GERANYLGERANYL DIPHOSPHATE REDUCTASE, CHLOROPLASTICcoord: 18..90
NoneNo IPR availablePANTHERPTHR42685FAMILY NOT NAMEDcoord: 18..90
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 17..98
e-value: 2.4E-10
score: 42.1
IPR036188FAD/NAD(P)-binding domain superfamilySUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 17..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15429contigH-elongata_contig15429:490..798 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15429.3574.1mRNA_H-elongata_contig15429.3574.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15429 490..798 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15429.3574.1 ID=prot_H-elongata_contig15429.3574.1|Name=mRNA_H-elongata_contig15429.3574.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=103bp
FLFSFILHPSSPDTTGMEMKHRIAVVGGGPSGSCAAEILAECEDVEVTLF
ERKMDNAKPCGGAIPLCMIAEFDLPANIVDRKVCAVGTISYQVQCRVLIS
IY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf