mRNA_H-elongata_contig15405.3563.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig15405.3563.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE) HSP 1 Score: 348 bits (893), Expect = 3.190e-97 Identity = 237/644 (36.80%), Postives = 347/644 (53.88%), Query Frame = 2
Query: 32 LTKDQVLLAQRPQQVSRRAAVPAGTPLRQDWHVPRQRVMEMVFEHLFSSREQPQVVGLVGESGSGKTTTAAEIVRSAQALDFFSDGVLWLSADEGAAGRLNLLTLQLARMVREDIVRDDNKIAAGATSKRPDDPGEDGTSYVKDAMAGCFHPGRGALRCLVIVDNVFEAEVATWLRDTGMWALVTTSDEDVVKGAGGKPVRINRMFGADAELLLKRASGLPKEVGWREGAKAVVELCGRVALDVSYVGKWSTVGEENHAVAWSSAADAIRLELRHPPPAWDTVGGNMTKDSLHLSHENSGDTASLSLDSDIELTKDDASATRRR------FSALVGSTRGSRVQELYLSLAVMPNGYKFTLNDAAVLLGVCIGDSVLDKKGE-EVRAALHTLERWTIVMAQGKAYHVHDAHLGFAREVIAGRSDIRRLAVERWTRFISSLHMVLTVDPHTLGRLWSAVERVGGEGWRAIRPYERNLGRLGSAD-PRYRAGVEAVAKFRKVDGEWAGASAMWQHLLAMEQQRAESTDVRYLL------------KELVESAER------------------RGAGTEAMFGLRDTR------------------KAEKMLRQVLKIEKSRAKPDDMLVTQALFHLGLCLRQGRRL 1795
L K + +L Q P+ ++ A VP GTP + WHV R+ V E VF+ L + P +VGLVG+SG+GKTT A+ IV S + FSDG++WL +EG L L LQLA+MV EDI G+ +RP +DG +YVK + H G+G L+CLV+ DNV+E++V + L +TGMW L++T DE++VK A G+ V ++ + A+AE +L+RA+ L E + AK ++ELCGRVA+D+++VG+WSTV AWS AA +R E+ D ++ E++G +D+ RRR F L + RVQ LYLSLAV+P+G+ FT+ DAAVLL D + E V + LERWTI+ + Y +HDAH FARE + R D+RR A++R R ISSL + +++ +TL LW+ V+RVGG+GW RPYE+ L L ++ P +R +EAVA F++ +W GA+ W+ LLA+E+ + D Y+L ++ VE A+ + G+EA GL D +AE +LR+ L+I+ + DD+ V LG+C+R+ RL
Sbjct: 183 LAKTETILRQLPKPPAKVANVPKGTPTHKSWHVERRNVTETVFQAL-DADGGPHLVGLVGDSGAGKTTAASAIVSSIVVRETFSDGIVWLPVNEGVHDNLPCLMLQLAQMVFEDI--------GGSVGRRPSGS-DDGLAYVKQQVEN-GHGGKG-LKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVVGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVGRWSTVRGRQDRTAWSDAACKVRAEM----------------DKGGVTAESNG--------------SEDSRVNRRRAILQAGFEDLAIGSDDERVQRLYLSLAVLPDGHAFTVKDAAVLLY----DREPGTEDEASVGGVVEALERWTIIRSVEATYRMHDAHSNFARESLMDRGDVRRPAIKRLVRSISSLEALRSINRYTLKHLWAGVQRVGGDGWATTRPYEKALEALDESNSPLFRETIEAVAWFQEAQEDWTGANRTWRRLLAVEEVQL-GADHPYVLNTYHCLARCAEHQDNVEEAKEWHRKQHQALPLAMARAQSKHVGSEAA-GLDDAGSLASLAATVITLHPGERGEAEMLLRRSLEIKMAELDQDDVQVAVVQHDLGVCIREAGRL 778
BLAST of mRNA_H-elongata_contig15405.3563.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI) HSP 1 Score: 344 bits (882), Expect = 4.600e-96 Identity = 209/509 (41.06%), Postives = 289/509 (56.78%), Query Frame = 2
Query: 53 LAQRPQQVSRRAAVPAGTPLRQDWHVPRQRVMEMVFEHLFSSREQPQVVGLVGESGSGKTTTAAEIVRSAQALDFFSDGVLWLSADEGAAGRLNLLTLQLARMVREDIVRDDNKIAAGATSKRPDDPGEDGTSYVKDAMAGCFHPGRGALRCLVIVDNVFEAEVATWLRDTGMWALVTTSDEDVVKGAGGKPVRINRMFGADAELLLKRASGLPKEVGWREGAKAVVELCGRVALDVSYVGKWSTVGEENHAVAWSSAADAIRLELRHPPPAWDTVGGNMTKDSLHLSHENSGDTASLSLDSDIELTKDDASATRRR------FSALVGSTRGSRVQELYLSLAVMPNGYKFTLNDAAVLLGVCIGDSVLDKKGEEVRAALHTLERWTIVMAQGKAYHVHDAHLGFAREVIAGRSDIRRLAVERWTRFISSLHMVLTVDPHTLGRLWSAVERVGGEGWRAIRPYERNLGRLGSADPRYRAGVEAVAKFRKVDGEWAGASAMWQHLLAME 1561
L P+ + AAVP G P+R+ WHV R+ M V + L S ++ VV L G SGSGKTT AAEIVRS + + FSDG++WL +EGA RL L LQLARMV E+I G + R ED +Y+K + H GR L+CLV+ DNV+E +V + L +TGMW L++T DE VVK + GK V ++ + ADAE +LKRA+ LP+E + A +++LCGRVA+DV++VG+WSTV + +WS AA IR E+ + VG + DS ++ A RR+ F L + RVQ LYLSLAVMP+G+ F+L DAAVLL S + + LERW+I+ + Y +HDAH FARE + R +RR A++RWTR++SSL ++ + D + L LW A+ER+GG+GW RPYE+ LG + +D R EAV F++ + GASA W+ LL +E
Sbjct: 167 LESLPRSFGKLAAVPMGAPVRKSWHVERRHAMATVLDALNGS-DRACVVALAGYSGSGKTTVAAEIVRSTEVREAFSDGIVWLPVNEGAKKRLPSLMLQLARMVHEEI---------GGSVGRVPSASEDSATYIKQRLEE-GHKGR-RLKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVVVDELSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVGRWSTVRGRHDPASWSDAASTIRTEM-------EKVGHDPDNDSA-----------------------ENIPAKRRKAILQGGFEDLAIGSDDERVQRLYLSLAVMPDGHAFSLKDAAVLL---YDRSPSTEDEASAGGVVDVLERWSIIRSAQGTYRMHDAHTDFARECLLDRGHVRRPALKRWTRYLSSLDILRSTDRYVLKGLWLAIERLGGDGWGKTRPYEKALGMMLESDALLRTTAEAVGWFQEAQEDLEGASASWRRLLEVE 630
BLAST of mRNA_H-elongata_contig15405.3563.1 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE) HSP 1 Score: 322 bits (824), Expect = 1.960e-89 Identity = 209/530 (39.43%), Postives = 296/530 (55.85%), Query Frame = 2
Query: 86 AAVPAGTPLRQDWHVPRQRVMEMVFEHLFSSREQPQVVGLVGESGSGKTTTAAEIVRSAQALDFFSDGVLWLSADEGAAGRLNLLTLQLARMVREDIVRDDNKIAAGATSKRPDDPGEDGTSYVKDAMAGCFHPGRGALRCLVIVDNVFEAEVATWLRDTGMWALVTTSDEDVVKGA-GGKPVRINRMFGADAELLLKRASGLPKEVGWREGAKAVVELCGRVALDVSYVGKWSTVGEENHAVAWSSAADAIRLEL---RHPPPAWDTVGGNMTKDSLHLSHENSGDTASLSLDSDIELTKDDASATRRRFSALVGSTRGSRVQELYLSLAVMPNGYKFTLNDAAVLL---GVCIGDSVLDKKGEEVRAALHTLERWTIVMAQGKAYHVHDAHLGFAREVIAGRSDIRRLAVERWTRFISSLHMVLTVD-PHTLGRLWSAVERVGGEGWRAIRPYERNLGRLGSADPRYRAGVEAVAKFRKVDGEWAGASAMWQHLLAMEQQR--AESTDVRYLLKELVESAERRGAGTE 1645
A VPAGTP R+ WHV R+ VM V + L P++VGLVG+SGSGKTT AAEIVRS + + FSDG++WLS ++GA RL L + LAR+V EDI G+ +RP +DG +Y + M H G+G L+CLV+ DNV+E V + L +TGMW L++T DE +V+ A GG V ++ + DA +L+RAS L E+ + A +VELCGRVA+DV++VG+WSTV + AWS AA +R ++ R WD + K L E D+ + DD R+ LYLSLAV+P+G+ FT DA LL C D V EE+ + TLERW+ + +G AY +HDAH GFAR+ + R +R+ AV+RWT +SSL ++ + D P L LW AV R+GGE WR +RPY L + ++P ++++ F+ G+W AS + +LA+++++ A+ L+ LV AER G E
Sbjct: 179 ATVPAGTPARKSWHVERRHVMRAVCDAL-PGEGGPRLVGLVGDSGSGKTTAAAEIVRSTEVREAFSDGIVWLSVNDGATERLRALMMHLARVVFEDI--------GGSVGRRPAGL-DDGAAYTRQRMQS-GHGGKG-LKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRASELSPELRLPDEAVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAAHKVRSKIERSRVSDNVWD-IRAVRRKAVLQAGFE------------DLAIGSDD-----------------ERIPRLYLSLAVLPDGHAFTAKDATALLYDRAPCPEDEV---STEEL---IRTLERWSALRTEGGAYRMHDAHSGFARDCVMDRGYVRKPAVKRWTLRLSSLDVLRSFDDPFVLKGLWLAVGRLGGESWRNVRPYAAALSEMDESNPLLLKSLQSLGWFQDAQGDWQSASDTCRRILAVKRRQLGADHPHTILTLRALVYCAERLGNAEE 660
BLAST of mRNA_H-elongata_contig15405.3563.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI) HSP 1 Score: 324 bits (830), Expect = 4.720e-89 Identity = 206/507 (40.63%), Postives = 290/507 (57.20%), Query Frame = 2
Query: 86 AAVPAGTPLRQDWHVPRQRVMEMVFEHLFSSREQPQVVGLVGESGSGKTTTAAEIVRSAQALDFFSDGVLWLSADEGAAGRLNLLTLQLARMVREDIVRDDNKIAAGATSKRPDDPGEDGTSYVKDAMAGCFHPGRGALRCLVIVDNVFEAEVATWLRDTGMWALVTTSDEDVVKGAGGKPVRINRMFGADAELLLKRASGLPKEVGWREGAKAVVELCGRVALDVSYVGKWSTVGEENHAVAWSSAADAIRLELRHPPPAWDTVGGNM--TKDSLHLSHENSGDTASLSLDSDIELTKDDASATRRRFSALVGSTRGSRVQELYLSLAVMPNGYKFTLNDAAVLLGVCIGDSVLDKKG---EEVRAA--LHTLERWTIVMA---------QGKAYHVHDAHLGFAREVIAGRSDIRRLAVERWTRFISSLHMVLTVDPHTLGRLWSAVERVGGEGWRAIRPYERNLGRLGSADPRYRAGVEAVAKFRKVDGEWAGASAMWQHLLAM 1558
A +P TP+R+ WHV R VME VFE L ++ P +VGLVG+SGSGKTT A+EIVRS + FSDGV+WL+ + GA RL L LQLA M+ E++ +RP +DG +Y+K+ M H G+G L+CLV+ DNV+E EV L +TGMW L++T DE++V G+ G+ V ++ M +AE +L++AS LP E + A ++ELCGRVA+D+++VG+WSTV + AWS AA +R E+ + V G + T+D+ + +G F L + RVQ LYLSLAV+P+G FT+ DAAVLL D+K +E AA + LERW+++ + +G Y +HDAH FARE + R D+RR A+ RWTR ISSL + +V H + LW VE+VGG+GW++ RPYE L + +DP V AVAKF++ + +W A A + LL M
Sbjct: 201 AKIPKATPIRKSWHVERLYVMERVFEAL-TAVGGPHLVGLVGDSGSGKTTAASEIVRSNEVRQAFSDGVVWLTVNHGAKDRLPSLMLQLAHMMCEEV-----------GGRRPA-TSDDGAAYIKEKMQR-GHGGKG-LKCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVGSEGEVVGVDEMSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRGRSDRTAWSDAAGKVRAEMGKIEG--ERVSGTVVETRDARRKAVLQAG------------------------FEDLASGSDDERVQRLYLSLAVLPDGRGFTVKDAAVLL--------YDRKPSAEDEASAAGVVEILERWSVLRSIRGCYRMAWRGGHYVLHDAHSDFAREKLMDRGDVRRPALVRWTRNISSLDTLRSVRWHDVRDLWLGVEQVGGDGWKSTRPYEAALAGMEDSDPLLPTSVVAVAKFQRHEEDWEEAIATCRRLLDM 658
BLAST of mRNA_H-elongata_contig15405.3563.1 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE) HSP 1 Score: 317 bits (812), Expect = 2.050e-87 Identity = 226/623 (36.28%), Postives = 325/623 (52.17%), Query Frame = 2
Query: 92 VPAGTPLRQDWHVPRQRVMEMVFEHLFSSREQPQVVGLVGESGSGKTTTAAEIVRSAQALDFFSDGVLWLSADEGAAGRLNLLTLQLARMVREDIVRDDNKIAAGATSKRPDDPGEDGTSYVKDAMAGCFHPGRGALRCLVIVDNVFEAEVATWLRDTGMWALVTTSDEDVVKGAGGKPVRINRMFGADAELLLKRASGLPKEVGWREGAKAVVELCGRVALDVSYVGKWSTVGEENHAVAWSSAADAIRLELRHPPPAWDTVGGNMTKDSLHLSHENSGDTASLSLDSDIELTKDDASATRRRFSALVGSTRGSRVQELYLSLAVMPNGYKFTLNDAAVLL---GVCIGDSVLDKKGEEVRAALHTLERWTIVMAQGKAYHVHDAHLGFAREVIAGRSDIRRLAVERWTRFISSLHMVLTVDPHTLGRLWSAVERVGGEGWRAIRPYERNL---GRLGSADPRYRAGVEAVAKFRKVDGEWAGASAMWQHLLAMEQQRAESTDVRYLLK-------------ELVESAERRGAGTEAMF------------------------------------GLRDTRKAEKMLRQVLKIEKSRAKPDDMLVTQALFHLGLCLRQGRRL 1795
VP GTP R+ W+V R+ VM+ VFE L +S P++VGLVG SGSGKTT A+E VRS + + FSDG+ WLS ++GA RL+ L LQLAR+V EDI G + R +D +Y++ M G L+CLV+ DNV+E EV + L +TGMW L++T + +V A G+ V ++ + ADA +L+RA+ LP + A ++ELCGRVA+D+++VG+WSTV +AWS A +R E+ VG SGD + ++ K + R F L + RVQ LYLSLAV P+G+ FT+ DAAVLL C D V + TLERWT++ ++ AY +HDAH FARE + +RR AV+RW IS L ++ + DP+ L LW AVE VGG+GW R Y L RL SA R + A+A+ ++ +W GAS W+ LL +E+++ D ++LK ++ E+A+ RG EA+ G D +AE +LR+ L+I+++ +D+ V L+ LG+CLR+ RL
Sbjct: 36 VPKGTPARKSWYVKRRHVMDTVFEGL-ASDGGPRLVGLVGGSGSGKTTVASESVRSTEVQEAFSDGIAWLSVNDGAKERLSSLMLQLARVVYEDI---------GCSVGRRPTSSDDCAAYIRQRMKK--GTGGKKLKCLVVADNVWEKEVVSKLLETGMWVLLSTRNITLVTEAHGEVVGVDELSEADAMSVLRRAAELPPQGKIPGDAVDLIELCGRVAMDLAFVGRWSTVRGRQDRMAWSDAVSKVREEM-------GKVG--------------SGDASEKLAETRDARRK---AILRAGFEDLAIGSDDERVQRLYLSLAVFPDGHAFTVRDAAVLLYDREPCAEDEA------SVAVVVDTLERWTVLRSEQGAYRMHDAHSIFARETLMDHGYVRRPAVKRWVSSISCLEVLRSSDPYVLKGLWLAVEGVGGDGWLKSRAYSAALVGMDRLHSALARQN--IIALARLQEAHEDWEGASTTWRRLLEIEKKQL-GADHYHVLKSYRSLASCAEQLGQVGEAADWRGKEVEALPLALARVQSQTDSGKVEGLDGANGLASVASTMLKFKPGSIDRAQAEVLLRRSLEIQEAALGHEDIAVADTLYQLGICLREAGRL 613
BLAST of mRNA_H-elongata_contig15405.3563.1 vs. uniprot
Match: A0A6H5J759_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J759_9PHAE) HSP 1 Score: 304 bits (779), Expect = 3.980e-86 Identity = 194/521 (37.24%), Postives = 277/521 (53.17%), Query Frame = 2
Query: 32 LTKDQVLLAQRPQQVSRRAAVPAGTPLRQDWHVPRQRVMEMVFEHLFSSREQPQVVGLVGESGSGKTTTAAEIVRSAQALDFFSDGVLWLSADEGAAGRLNLLTLQLARMVREDIVRDDNKIAAGATSKRPDDPGEDGTSYVKDAMAGCFHPGRGALRCLVIVDNVFEAEVATWLRDTGMWALVTTSDEDVVKGAGGKPVRINRMFGADAELLLKRASGLPKEVGWREGAKAVVELCGRVALDVSYVGKWSTVGEENHAVAWSSAADAIRLELR--HPPPAWDTVGGNMTKDSLHLSHENSGDTASLSLDSDIELTKDDASATRRRFSALVGSTRGSRVQELYLSLAVMPNGYKFTLNDAAVLLGVCIGDSVLDKKGEEVRAALHTLERWTIVMAQ-GKAYHVHDAHLGFAREVIAGRSDIRRLAVERWTRFISSLHMVLTVDPHTLGRLWSAVERVGGEGWRAIRPYERNLGRLGSADPRYRAGVEAVAKFRKVDGEWAGASAMWQHLLAMEQQRAESTD 1585
L ++++ + P+ ++A VP GTP R+ WHV R V E V E L + P++VGLVG+SG+GKTT AAE+VRS + FSDG++WL+ + GA RL L LQLARMV+EDI G P++ G + +Y+K M H G+G L+CL + DNV+E EV + L TGM L++T E++V GA G PVR++ + DAE +L+ A+ LP V + A +++LCGRVA+D+++VG+WSTV + VAWS AA +R E+ D GN K L E D+ + DD RVQ LYLSLAV+P+ ++DAA+LL + E V L LERW+++ + Y++HD FAR + R D+RR A+ RW +ISSL V + + L W VE+VGGEGW P E L + +P + + AVAK + +W AS +W L + +S D
Sbjct: 81 LANQEIIIDRLPKPPIKKAYVPQGTPTRKSWHVER-HVTETVVEAL-TGEAGPRLVGLVGDSGAGKTTAAAELVRSNVVRESFSDGIVWLTVNYGANKRLPSLMLQLARMVQEDI--------GGRVGGHPNESGGNADAYIKQRMEN-GHGGKG-LKCLAVADNVWEKEVVSMLLKTGMTVLLSTRHEELVTGARGVPVRLDELSARDAESVLRSAAELPPAVRLPDDAVDLIDLCGRVAMDLAFVGRWSTVRGRHDRVAWSDAAAKVRAEIAKIEGDDIVDGARGNRRKAILQAGLE------------DLAIGSDD-----------------ERVQRLYLSLAVLPDDQGIQVHDAALLL---YDRDPTAEDEESVARVLDVLERWSVLRSTWAYKYYMHDVQSEFARASLMDRGDVRRHALRRWVGYISSLDTVRSYNADYLKHQWLDVEKVGGEGWDETHPCETALAEMDDPEPLLQESIAAVAKAHEAHEDWEKASTIWHRSLGVSTWWGQSLD 557
BLAST of mRNA_H-elongata_contig15405.3563.1 vs. uniprot
Match: A0A6H5KJ30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ30_9PHAE) HSP 1 Score: 257 bits (656), Expect = 4.630e-67 Identity = 178/473 (37.63%), Postives = 250/473 (52.85%), Query Frame = 2
Query: 86 AAVPAGTPLRQDWHVPRQRVMEMVFEHLFSSREQPQVVGLVGESGSGKTTTAAEIVRSAQALDFFSDGVLWLSADEGAAGRLNLLTLQLARMVREDIVRDDNKIAAGATSKRPDDPGEDGTSYVKDAMAGCFHPGRGA--LRCLVIVDNVFEAEVATWLRDTGMWALVTTSDEDVVKGAGGKPVRINRMFGADAELLLKRASGLPKEVGWREGAKAVVELCGRVALDVSYVGKWSTVGEENHAVAWSSAADAIRLELRHPPPAWDTVGGNM--TKDSLHLSHENSGDTASLSLDSDIELTKDDASATRRRFSALVGSTRGSRVQELYLSLAVMPNGYKFTLNDAAVLLGVCIGDSVLDKKGEEVRAAL-HTLERWTIVMA---------QGKAYHVHDAHLGFAREVIAGRSDIRRLAVERWTRFISSLHMVLTVDPHTLGRLWSAVERVGGEGWRAIRPYERNLGRLGSADP 1462
A +P TP+ + WHV R V+E VFE L ++ P +VGLVG+SGSGKTT A+EIVRS + RL L LQLA MV E+I +RP +DGT+Y+K+ M H G G L+CL +VDNV+E EV L + GMW L++T DE++V G G+ V +N + +AE +L++A+ LP E + A ++ELCGRVA+D+++ G+ STV + AWS AA +R E+ + V G + T+D+ + +G F L + RVQ LYLSLAV+P+G +FT+ DAAVL I D + + E A + LERW+ + + +G Y +HDAH FARE + R D+ R A+ RWTR ISS+ + V H + LW E+VGG+GW+ RPYE L L +DP
Sbjct: 175 AKIPKSTPIWKSWHVERFDVVERVFEPL-TADGGPPLVGLVGDSGSGKTTAASEIVRSNE-------------------DRLPSLMLQLAHMVYEEI-----------GGRRPA-TSDDGTAYIKERM----HRGHGGEGLKCLGVVDNVWEKEVVCELLEAGMWVLLSTRDEELVTGWEGEVVEVNELSEVEAESVLRKAAELPPETRLPDDAVDLIELCGRVAMDLAFGGRLSTVRGRSDRTAWSKAASKVRTEMSKGE--CEGVRGTVVETRDARRKAVVQAG------------------------FGDLAIGSDDERVQRLYLSLAVLPDGRRFTVKDAAVL----IYDRMPSAEDEASAAGVVEILERWSALCSIRGCYRMAWRGSHYVLHDAHSDFAREKLMDRGDVCRPALVRWTRNISSVDTLRAVRWHEVRDLWLGAEQVGGDGWKITRPYEAALAGLEDSDP 581
BLAST of mRNA_H-elongata_contig15405.3563.1 vs. uniprot
Match: A0A6H5JSI2_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI2_9PHAE) HSP 1 Score: 221 bits (563), Expect = 1.990e-54 Identity = 184/594 (30.98%), Postives = 286/594 (48.15%), Query Frame = 2
Query: 41 DQVLLAQRPQQVSRRAAVPAGTPLRQDWHVPRQRVMEMVFEHLFSSREQPQVVGLVGESGSGKTTTAAEIV--RSAQALDFFSDGVLWL--SADEGAAGRLNLLTLQLARMVREDIVRDDNKIAAGATSKRPDDPGEDGTSYVKDAMAGCFHPGRGALRCLVIVDNVFEAEVATWLRDTGMWALVTTSDEDVVKGAGGKPVRINRMFGADAELLLKRASGLPKEVGWREGAKAVVELCGRVALDVSYVGKWSTVGEENHAV----AWSSAADAIRLELRHPPPAWDTVGGNMTKDSLHLSHENSGDTASLSLDSDIELTKDDASATRRRFSALVGSTRGSRVQELYLSLAVMPNGYKFTLNDAAVLLGVCIGDSVLDKKGEEV-RAALHTLERWTIVMAQG-KAYHVHDAHLGFAREVIAGRSDIRRLAVERWTRFISSLHMVLTVDPHTLGRLWSAVERVGGEGWRAIRPYERNLGRLGSADPRYRAGVEAVAKFRKVDGEWAGASAMWQHLLAMEQQRAESTDVRYLLKELVESAERRGAGTEAMFGLRDTRKAEKMLRQVLKIEKSRAKPDDMLVTQALFHLGLCLRQGRR 1792
DQ+L +P + A VP P + +HV R V++ V + + P + L G SG+GKTT+AA +V R + F DGV+WL + G A RL L LA+ + ED+++ GA G+DG SYV+ ++ + LRCLV+ D+V+EA V LR+TGMW L+TT ++ G + V ++ + A+AE +L+ A+ LP + + V+E+CGRVA+D ++VG W++V N AW + + ++ H V G M N+G+ D+D + + + R F + QELY+ LAV P G+ F +DAAVLL + EEV + + LERW ++ + Y HDAH FAR+ + R+D+R AVERWT IS L + V+ L +W A+E VGG+GW A+RPY+ L ++ +++P +A + A+ ++ L A + G E M ++ E + R+ L+IE++ PDD+ V L LGLC+R+ R
Sbjct: 155 DQILARLQPG--PKLAPVPKKAPFTKSFHVVRDGVVDRVCK-ILGGDGGPAMAALTGGSGAGKTTSAAAMVGERGDRVRALFPDGVVWLWVGREAGTADRLPSLMSNLAKRLHEDVMK-------GAVDAPT---GDDGVSYVRKIVS------QEKLRCLVVADDVWEASVVQKLRETGMWVLLTTRFPEM--GEPEERVVMDTLIPAEAEDVLRGAAELPLGERLCDASMKVLEICGRVAMDTAFVGSWTSVRTTNGVPKSNKAWERTVEELTAQIDH-------VRGQMKVG-------NTGE------DNDRAINR--LAVLRAGFKYI--GREDPLAQELYVKLAVFPEGFLFGESDAAVLL-----------ENEEVAKGPISILERWGVLRTDASEKYRTHDAHADFARKKLMDRNDLREPAVERWTEHISRLDFAVGVEIFVLLPMWRALEEVGGKGWWALRPYDDQLIQMVTSNPAT---------------SYATSGAVG------------------VVMNLYRGARKLGELAEIM------KRVEPLFRRALEIEEATLGPDDIQVAVTLQELGLCMRETGR 653
BLAST of mRNA_H-elongata_contig15405.3563.1 vs. uniprot
Match: D8LJY3_ECTSI (Tetratricopeptide TPR_2 repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJY3_ECTSI) HSP 1 Score: 179 bits (454), Expect = 5.020e-43 Identity = 124/304 (40.79%), Postives = 160/304 (52.63%), Query Frame = 2
Query: 995 RRRFSALVGSTRGSRVQELYLSLAVMPNGYKFTLNDAAVLL----GVCIGDSVLDKKGEEV--------------RAALHTLERWTIVMAQG------------KAYHVHDAHLGFAREVIAGRSDIRRLAVERWTRFISSLHMVLTVDPHTLGRLWSAVERVGGEGWRAIRPYERNLGRLGSADPRYRAGVEAVAKFRKVDGEWAGASAMWQHLLAMEQQRAESTDVRYLLKELVESAERRGAGTEAMFGLRDTRK------------AEKMLRQVLKIEKSRAKPDDMLVTQALFHLGLCLR 1780
R F LVG + LYLSLAV+P+G++FT+ DAAVLL GD + R L LE I+ A G ++ +H+AH GFARE++ I AV RW F+SSL VL DP L RLWSAVE VGG+GWR RPYE L + + DP R + AVAKFR +G+W GAS MW+ LL +EQ RA+ +V Y + ELV +AE+ G EA R R+ AE++LR+ L IE++R DD V + LFHLG+CLR
Sbjct: 107 RAGFRDLVGVAGDDDSRLLYLSLAVLPDGHEFTVKDAAVLLHGDGSARCGDGMAAASAXXXXXXXXXXXXXXXXXRRVLRVLEARGILTASGGRGGRRKSTSSPSSFRMHEAHSGFAREILLDCPKILGWAVGRWVGFLSSLDAVLFFDPSALARLWSAVEDVGGKGWRDGRPYETALEAIDNYDPLCRVCLVAVAKFRSAEGDWDGASLMWRRLLTVEQ-RAQEPNVMYPVWELVNAAEKGGKPEEAAAWRRYGRETLNLAMAGRLKEAEQLLRRALTIEEARLGEDDPRVARTLFHLGVCLR 409
BLAST of mRNA_H-elongata_contig15405.3563.1 vs. uniprot
Match: A0A6H5L0N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0N2_9PHAE) HSP 1 Score: 152 bits (384), Expect = 2.380e-33 Identity = 102/246 (41.46%), Postives = 130/246 (52.85%), Query Frame = 2
Query: 995 RRRFSALVGSTRGSRVQELYLSLAVMPNGYKFTLNDAAVLL----GVCIGDSVLDKKGEE------------VRAALHTLERWTIVMAQG------------KAYHVHDAHLGFAREVIAGRSDIRRLAVERWTRFISSLHMVLTVDPHTLGRLWSAVERVGGEGWRAIRPYERNLGRLGSADPRYRAGVEAVAKFRKVDGEWAGASAMWQHLLAMEQQRAESTDVRYLLKELVESAERRGAGTEA 1648
R F LV + LYLSLAV+P+G++FT+ DAAVLL GD ++ G R L LE I+ A G ++ +H+AH FARE++ I AV RW F+SSL VL DP L RLWSAVE VGG+GWR RPYE L + + DP R + AVAKFR +G+W GAS MW+ LL +EQ RA+ +V Y + ELV +AE G EA
Sbjct: 691 RAGFRDLVSVAGDDDSRLLYLSLAVLPDGHEFTVKDAAVLLHGDGSARCGDGIVAAAGGRGXXXXXXXXXXXXRRVLRVLEARGILTASGGRGGRRRSASSPSSFRMHEAHSAFAREILLDCPKILGWAVGRWVGFLSSLDAVLFFDPFALARLWSAVEDVGGKGWRDGRPYETALEAIDNYDPLCRVCLVAVAKFRGAEGDWDGASLMWRRLLTVEQ-RAQEPNVMYPVWELVNAAENGGKPEEA 935 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15405.3563.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig15405.3563.1 >prot_H-elongata_contig15405.3563.1 ID=prot_H-elongata_contig15405.3563.1|Name=mRNA_H-elongata_contig15405.3563.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=772bp MEMVFEHLFSSREQPQVVGLVGESGSGKTTTAAEIVRSAQALDFFSDGVLback to top mRNA from alignment at H-elongata_contig15405:1327..5754- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig15405.3563.1 ID=mRNA_H-elongata_contig15405.3563.1|Name=mRNA_H-elongata_contig15405.3563.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4428bp|location=Sequence derived from alignment at H-elongata_contig15405:1327..5754- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig15405:1327..5754- >mRNA_H-elongata_contig15405.3563.1 ID=mRNA_H-elongata_contig15405.3563.1|Name=mRNA_H-elongata_contig15405.3563.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4632bp|location=Sequence derived from alignment at H-elongata_contig15405:1327..5754- (Himanthalia elongata Himel1 dioecious)back to top |