prot_H-elongata_contig15399.3559.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15399.3559.1
Unique Nameprot_H-elongata_contig15399.3559.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length59
Homology
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BLAST of mRNA_H-elongata_contig15399.3559.1 vs. uniprot
Match: D7G0R4_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0R4_ECTSI)

HSP 1 Score: 48.9 bits (115), Expect = 3.660e-5
Identity = 20/33 (60.61%), Postives = 25/33 (75.76%), Query Frame = 0 
Query:    1 CSKLPSYGVTGSTKREYCAGHALEGMVNVKKKK 33
            C K P+YGV G++ REYC  HAL GMV+V +KK
Sbjct:   50 CGKYPTYGVEGTSNREYCREHALSGMVDVHRKK 82
[Close]
BLAST of mRNA_H-elongata_contig15399.3559.1 vs. uniprot
Match: A0A6H5J7Z7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7Z7_9PHAE)

HSP 1 Score: 48.9 bits (115), Expect = 3.870e-5
Identity = 20/33 (60.61%), Postives = 25/33 (75.76%), Query Frame = 0 
Query:    1 CSKLPSYGVTGSTKREYCAGHALEGMVNVKKKK 33
            C K P+YGV G++ REYC  HAL GMV+V +KK
Sbjct:   50 CGKYPTYGVEGTSNREYCREHALSGMVDVHRKK 82
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15399.3559.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G0R4_ECTSI3.660e-560.61EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5J7Z7_9PHAE3.870e-560.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15399contigH-elongata_contig15399:7668..7844 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15399.3559.1mRNA_H-elongata_contig15399.3559.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15399 7668..7844 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15399.3559.1 ID=prot_H-elongata_contig15399.3559.1|Name=mRNA_H-elongata_contig15399.3559.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=59bp
CSKLPSYGVTGSTKREYCAGHALEGMVNVKKKKCVVDECSKLPTYGMAGS
TKREYCAEH
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