mRNA_H-elongata_contig15264.3478.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig15264.3478.1
Unique NamemRNA_H-elongata_contig15264.3478.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig15264.3478.1 vs. uniprot
Match: A0A6H5KU25_9PHAE (ANAPC4_WD40 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KU25_9PHAE)

HSP 1 Score: 324 bits (830), Expect = 8.640e-105
Identity = 172/252 (68.25%), Postives = 197/252 (78.17%), Query Frame = 1
Query:  136 ACVEKRDRFIPTRSSMCMERSNYLMSKKNNSSDTV-------DMTRSSGGNAVTPDDFNKLLESTLLGDP--ALREGGYRILDFWNKAPAQKEGYQNGFKVFYSQNKDRARGPSR---RPTRHIPSTPVRILDAPNLINDYYLNLLSWGSNDVLAVALGQCVYLWNARNGDITELLSL-GAGDYVSSVAWTKSGTHLAVGTTGGETQFWDAAAVTRLRNMNGHSARVGALAWNEHLVTSGSMDTTAVHHDLR 852
            A  E+RDRFIP+RSSMCM RSNYLMSK+N+  +               GGN+    +F K+LES LLG P  A    G+R+L F NKAPAQ+EGYQNG +V YSQNK  +R  S    RPTRHIPS PVRILDAP+L++DYYLNLLSWGSNDVLAVALGQCVYLWNA++GDITEL SL G  DYVSSV+WT SGTHLAVGT GGETQFWD++ +T LR+MNGHSARVGALAWNEH++TSGS DTTAVHHDLR
Sbjct:   78 AVGERRDRFIPSRSSMCMSRSNYLMSKENDGGENTAPGGAGFTSAAVDGGNSG---EFQKVLESNLLGHPPAAAAAPGHRVLAFRNKAPAQEEGYQNGLRVLYSQNKGSSRSSSSGAARPTRHIPSAPVRILDAPDLLDDYYLNLLSWGSNDVLAVALGQCVYLWNAKSGDITELCSLEGEQDYVSSVSWTASGTHLAVGTAGGETQFWDSSTLTMLRSMNGHSARVGALAWNEHVLTSGSRDTTAVHHDLR 326          
BLAST of mRNA_H-elongata_contig15264.3478.1 vs. uniprot
Match: W7UCG6_9STRA (Cell division cycle 20 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UCG6_9STRA)

HSP 1 Score: 231 bits (588), Expect = 2.480e-70
Identity = 134/307 (43.65%), Postives = 189/307 (61.56%), Query Frame = 1
Query:    1 PFTTLVMPRWQRKKLQQQQNQLRNDASVSFSFVTSNRPSSSSSENACVEKRDRFIPTRSSMCMERSNYLMSKKNNS---------------------SDTVDMTRSSGGNAVTPDDFNKLLESTLLGDPALREGGYRILDFWNKAPAQKEGYQNGFKVFYSQNKDRARGPSRRPTRHIPSTPVRILDAPNLINDYYLNLLSWGSNDVLAVALGQCVYLWNARNGDITELLSL-GAGDYVSSVAWTK-SGTHLAVGTTGGETQFWDAAAVTRLRNMNGHSARVGALAWNEHLVTSGSMDTTAVHHDLR 852
            PF + VMPRW+RKKLQ+         S + + +  ++  S           DRFIP RS M M++++Y +SK+N +                      D ++       + V   ++++ LE+ LL      E  +R+L F NKAP  KEG+QN  +V Y+QNK  A   S R  RHIPS P RILDAP+L++DYYLN++ WG+++VLA+AL Q +YLWNA  GDITEL+S+  A DY++SV+W + +G+HLA+GT   +TQ WD AA  ++R+MNGHSARV ALAW  H+++SGS D T VHHD+R
Sbjct:   38 PFESKVMPRWERKKLQKL-------GSAAGAGLDGDKTGS----------HDRFIPNRSGMHMDKAHYALSKENPNPQGDDDKKDDSASLVEDRAMGEDGMEKVSKQEASMVQKKEYHQALEAQLLDG----EKEHRVLAFRNKAPLPKEGFQNHLQVLYTQNKGTAPS-SLRSYRHIPSAPERILDAPDLLDDYYLNIMDWGASNVLAIALTQTLYLWNAATGDITELMSVPDADDYITSVSWIQDTGSHLAIGTASAQTQLWDVAAQKQVRSMNGHSARVSALAWKRHILSSGSRDATIVHHDVR 322          
BLAST of mRNA_H-elongata_contig15264.3478.1 vs. uniprot
Match: A0A7S1TZ58_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZ58_9STRA)

HSP 1 Score: 229 bits (585), Expect = 1.070e-68
Identity = 131/283 (46.29%), Postives = 182/283 (64.31%), Query Frame = 1
Query:   10 TLVMPRWQRKKLQQQQNQLRNDASVSFSFVTSNRPSSSSSENACVEKRDRFIPTRSSMCMERSNYLMSKKNNSSDTVDMTRSSGGNAVTPDDFNKLLESTLLGDPALREGGYRILDFWNKAPAQKEGYQNGFKVFYSQNKDRARGPSRRPTRHIPSTPVRILDAPNLINDYYLNLLSWGSNDVLAVALGQCVYLWNARNGDITELLSL-GAGDYVSSVAWTKSG-THLAVGTTGGETQFWDAAAVTRLRNMNGHSARVGALAWNEHLVTSGSMDTTAVHHDLR 852
            T  MPRWQRK+L           + S S  +     SS       E  DRFIP+R++M M+ S+Y ++ K N  + +      GG +      NK L+++LL      + G+R+L F NKAPA ++GY+N  +V Y+ NK  A   + + TRHIPS P+RILDAP+L++DYYLNL+SW S + +AVALG  VYLW+A  G I+EL++L     YVSSV+W + G THLAVGT+   TQ WD +A  ++R+M+GH++RVGALAWN+HL+ SGS DTT V+HD+R
Sbjct:   23 TSKMPRWQRKQL-----------AASLSGESGGAGDSSG------EGTDRFIPSRANMDMDHSHYSVNSKENGENGI------GGKSPAKASLNKALKNSLL------DKGHRVLAFKNKAPAPRDGYENHLRVLYTANKGAADKAAVKSTRHIPSAPLRILDAPDLLDDYYLNLVSWSSTNTVAVALGPSVYLWDAATGGISELMTLEDESQYVSSVSWIQEGGTHLAVGTSTALTQLWDVSATKQVRSMDGHTSRVGALAWNQHLLASGSADTTVVNHDVR 276          
BLAST of mRNA_H-elongata_contig15264.3478.1 vs. uniprot
Match: A0A7S2WBP6_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WBP6_9STRA)

HSP 1 Score: 217 bits (553), Expect = 8.030e-64
Identity = 129/281 (45.91%), Postives = 179/281 (63.70%), Query Frame = 1
Query:   16 VMPRWQRKKLQQQQNQLRNDASVSFSFVTSNRPSSSSSENACVEKRDRFIPTRSSMCMERSNYLMSKKNNSSDTVDMTRSSGGNAVTPDDFNKLLESTLLGDPALREGGYRILDFWNKAPAQKEGYQNGFKVFYSQNKDRARGPSRRPTRHIPSTPVRILDAPNLINDYYLNLLSWGSNDVLAVALGQCVYLWNARNGDITELLSL-GAGDYVSSVAWTKSGT-HLAVGTTGGETQFWDAAAVTRLRNMNGHSARVGALAWNEHLVTSGSMDTTAVHHDLR 852
            V PRW+RK LQQ+       A    S    +R S + ++     + DRFIP R +M +  +++ + K+NNS+       S+  ++ T  +FNK L +++        G +R+L F  KAPA  EGY+N  KV Y+QNK +  G + +P RHIPS P RILDAP+L++DYYLNL+ WGS+++LAVALGQ VYLWNA  G I EL    G  DY++SV + + G  +LAVGT   ET+ WD      LRNM+GHSARV +LAWN+H+++SGS D+T VHHD+R
Sbjct:   27 VQPRWKRKALQQRV------AKTPKSGRKRSR-SKTPAKGKNTPQHDRFIPNRGAMDLANAHFNLMKENNSA------ASNAVDSPTRAEFNKALANSMGA------GDHRVLAFKKKAPAPPEGYENSLKVLYTQNKAKL-GKTHKPARHIPSAPERILDAPDLLDDYYLNLVDWGSSNMLAVALGQTVYLWNAETGGIEELCQCEGEDDYITSVKFVQEGGGYLAVGTNFCETKLWDIETSKLLRNMDGHSARVSSLAWNQHILSSGSRDSTIVHHDVR 287          
BLAST of mRNA_H-elongata_contig15264.3478.1 vs. uniprot
Match: A0A7S3UT71_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UT71_HETAK)

HSP 1 Score: 206 bits (525), Expect = 6.690e-63
Identity = 111/226 (49.12%), Postives = 149/226 (65.93%), Query Frame = 1
Query:  181 MCMERSNYLMSKKNNSSDTVDMTRSSGGNAVTPDDFNKLLESTLLGDPALREGGYRILDFWNKAPAQKEGYQNGFKVFYSQNKDRARGPSRRPTRHIPSTPVRILDAPNLINDYYLNLLSWGSNDVLAVALGQCVYLWNARNGDITELLSL-GAGDYVSSVAWTKSG-THLAVGTTGGETQFWDAAAVTRLRNMNGHSARVGALAWNEHLVTSGSMDTTAVHHDLR 852
            M M+ +NY +SK+N           S  N       N +L+  LL      +  +RIL   +KAPA KEG+QN  K+ YSQN+  A     +  RHIPS P RILDAP++++DYYLNLLSW  ++VLAVAL Q VYLW A  G ITEL+S+  + DY+SSV+W + G +HLA+GT   +TQ WD  A  ++R+MNGH+ARVG+LAWN H+++SGS D+T VHHD+R
Sbjct:    1 MNMDMANYALSKEN-----------SDPNCPEEQGRNDMLKQNLLSAGDDSDKAHRILSLKHKAPAPKEGHQNSLKILYSQNQGCATYAKSK--RHIPSAPSRILDAPDVVDDYYLNLLSWSKSNVLAVALNQSVYLWEAATGSITELMSVTDSDDYISSVSWIQEGGSHLAIGTANAKTQLWDCTASRQVRSMNGHAARVGSLAWNRHILSSGSRDSTIVHHDVR 213          
BLAST of mRNA_H-elongata_contig15264.3478.1 vs. uniprot
Match: A0A7S3GA86_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GA86_9EUKA)

HSP 1 Score: 209 bits (533), Expect = 3.050e-61
Identity = 112/234 (47.86%), Postives = 155/234 (66.24%), Query Frame = 1
Query:  154 DRFIPTRSSMCMERSN-YLMSKKNNSSDTVDMTRSSGGNAVTPDDFNKLLESTLLGDPALREGGYRILDFWNKAPAQKEGYQNGFKVFYSQNKDRARGPSRRPTRHIPSTPVRILDAPNLINDYYLNLLSWGSNDVLAVALGQCVYLWNARNGDITELLSLGAGDYVSSVAWTKSGTHLAVGTTGGETQFWDAAAVTRLRNMNGHSARVGALAWNEHLVTSGSMDTTAVHHDLR 852
            DRFIP+R +M  E S+ YL   +N+SS      R SG  +   +++   L STLL D  L +   +IL F NKAP  KEG+QN  K  Y+QNK +     ++ TRHIP  P +ILDAP L++DYYLNLL W ++++LAVAL Q VYLWNA +GDI EL+ +    YVSSV+W + G++LAVG + GE Q W+ +   ++R M GHS+RVG+L+WN ++++SGS D T  H D+R
Sbjct:   33 DRFIPSRPAMDFELSHSYLTQPENDSS----FNRPSGPQSPLKEEYRSTLASTLL-DTDLSQDSSKILAFKNKAPEPKEGWQNSMKALYTQNKVKEVQRKQKVTRHIPQAPEKILDAPQLLDDYYLNLLDWNADNILAVALSQTVYLWNATSGDIDELMQVDGELYVSSVSWIQEGSYLAVGISNGEVQLWEVSQKKKIRTMFGHSSRVGSLSWNSYILSSGSRDATIRHSDVR 261          
BLAST of mRNA_H-elongata_contig15264.3478.1 vs. uniprot
Match: A0A4D9DDJ3_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DDJ3_9STRA)

HSP 1 Score: 207 bits (528), Expect = 2.390e-60
Identity = 106/196 (54.08%), Postives = 143/196 (72.96%), Query Frame = 1
Query:  271 VTPDDFNKLLESTLLGDPALREGGYRILDFWNKAPAQKEGYQNGFKVFYSQNKDRARGPSRRPTRHIPSTPVRILDAPNLINDYYLNLLSWGSNDVLAVALGQCVYLWNARNGDITELLSL-GAGDYVSSVAWTK-SGTHLAVGTTGGETQFWDAAAVTRLRNMNGHSARVGALAWNEHLVTSGSMDTTAVHHDLR 852
            V   ++++ LE+ LL      E  +R+L F NKAP  KEG+QN  +V Y+QNK  A   S R  RHIPS P RILDAP+L++DYYLN++ WG+++VLA+AL Q +YLWNA  GDITEL+S+  A DY++SV+W + +G+HLA+GT   +TQ WD AA  ++R+MNGHSARV ALAW  H+++SGS D T VHHD+R
Sbjct:   17 VQKKEYHQALEAQLLDG----EKEHRVLAFRNKAPLPKEGFQNHLQVLYTQNKGTAPS-SLRSYRHIPSAPERILDAPDLLDDYYLNIMDWGASNVLAIALTQTLYLWNAATGDITELMSVPDADDYITSVSWIQDTGSHLAIGTASAQTQLWDVAAQKQVRSMNGHSARVSALAWKRHILSSGSRDATIVHHDVR 207          
BLAST of mRNA_H-elongata_contig15264.3478.1 vs. uniprot
Match: A0A7S3VH96_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VH96_9STRA)

HSP 1 Score: 208 bits (530), Expect = 2.700e-60
Identity = 127/292 (43.49%), Postives = 179/292 (61.30%), Query Frame = 1
Query:    7 TTLVMPRWQRKKLQQQQNQLRNDASVSFSFVTSNRP----SSSSSENACVEKRDRFIPTRSSMCMERSNYLMSKKNNSSDTVDMTRSSGGNAVTPDDFNKLLESTLLGDPALREGGYRILDFWNKAPAQKEGYQNGFKVFYSQNKDRARGP--SRRPTRHIPSTPVRILDAPNLINDYYLNLLSWGSNDVLAVALGQCVYLWNARNGDITELLSLGAGD---YVSSVAWTKSG-THLAVGTTGGETQFWDAAAVTRLRNMNGHSARVGALAWNEHLVTSGSMDTTAVHHDLR 852
            T+  MPRW+RK+L+   +Q  N+ + S S   + +     SS+S  + C     RFIP R++M  E+S + + + ++SSD       S G++   D++   L S +LG        +RIL F  KAPA K    N  KV YS +   ++    S+  TR IPS P RILDAP+L++DYY+NLLSW   ++LAVAL Q VYLWNA +GDI EL S    +   YVSSV+W K G THLA+GT+ G TQ WD  A  RLR+M+GH+ RVG+L+WN H++++G  D+  V+HD+R
Sbjct:   25 TSAAMPRWKRKQLEAAMSQAENNVNASPSKKEALKQPLAQSSTSGPSGC-----RFIPNRAAMDFEKSAHALRRSDSSSDLE-----SDGSSSMEDEYRTSLNSEILGSDD--SSSHRILSFKEKAPAPKGDTVNNLKVLYSASGYGSKNSQSSKLTTRSIPSAPSRILDAPDLLDDYYVNLLSWSDTNILAVALAQTVYLWNASSGDIQELCSFEGPENDTYVSSVSWVKEGGTHLAIGTSMGTTQLWDVQAGKRLRSMDGHTDRVGSLSWNRHILSTGGRDSIVVNHDVR 304          
BLAST of mRNA_H-elongata_contig15264.3478.1 vs. uniprot
Match: A0A2R5GRF9_9STRA (WD repeat-containing protein slp1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GRF9_9STRA)

HSP 1 Score: 208 bits (529), Expect = 3.320e-60
Identity = 123/281 (43.77%), Postives = 173/281 (61.57%), Query Frame = 1
Query:   16 VMPRWQRKKLQQQQNQLRNDASVSFSFVTSNRPSSSSSENACVEKRDRFIPTRSSMCMERSNYLMSKKNNSSDTVDMTRSSGGNAVTPDDFNKLLESTLLGDPALREGGYRILDFWNKAPAQKEGYQNGFKVFYSQNKDRARGPSRRPTRHIPSTPVRILDAPNLINDYYLNLLSWGSNDVLAVALGQCVYLWNARNGDITELLSLGA-GDYVSSVAWTKSGT-HLAVGTTGGETQFWDAAAVTRLRNMNGHSARVGALAWNEHLVTSGSMDTTAVHHDLR 852
            V PRW+RK L          A    S    NR   + S+     + DRFIP R +M +  +++ + K+N+SS       S+   + T  +FNK L S++        G  R+L F  KAPA  EGY+N  KV Y+QNK++    +++P RHIPS P RILDAP+L++DYYLNL+ WG++++LAVALGQ VYLWNA  G I EL    A  DY++SV + + G  +LAVGT   ET+ +D      LRNM+GHS+RV +L+WN+H+++SGS D+  VHHD+R
Sbjct:   31 VEPRWKRKALA---------ARTPKSSRKRNRSGKTPSKGKSTPQHDRFIPNRGAMDLANAHFNLMKENSSS------ASNQSESPTRAEFNKALASSMGA------GDSRVLAFKKKAPAPPEGYENSLKVLYTQNKEKM-SRAQKPVRHIPSAPERILDAPDLLDDYYLNLVDWGASNMLAVALGQTVYLWNAETGGIEELCQCEAEDDYITSVKFVQEGGGYLAVGTNFSETKLFDVETCKLLRNMDGHSSRVSSLSWNQHVLSSGSRDSIIVHHDVR 289          
BLAST of mRNA_H-elongata_contig15264.3478.1 vs. uniprot
Match: A0A0L0DAZ6_THETB (Cdc20 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DAZ6_THETB)

HSP 1 Score: 205 bits (522), Expect = 3.010e-59
Identity = 121/287 (42.16%), Postives = 179/287 (62.37%), Query Frame = 1
Query:   10 TLVMPRWQRKKLQQQQNQLRNDASVSFSFVTSNRPSSSSSEN-----ACVEKRDRFIPTRSSMCMERSNYLMSKKNNSSDTVDMTRSSGGNAVTPDDFNKLLESTLLGDPALREGGYRILDFWNKAPAQKEGYQNGFKVFYSQNKDRARGPSRRPTRHIPSTPVRILDAPNLINDYYLNLLSWGSNDVLAVALGQCVYLWNARNGDITELLSLGAGD-YVSSVAWTKSGTHLAVGTTGGETQFWDAAAVTRLRNMNGHSARVGALAWNEHLVTSGSMDTTAVHHDLR 852
            T V+PRW+RK +++ Q    + A+ S S +T++  +++ S       +   + DRFIP R++M M    + + ++NN +   D    SG  +   +++ + L+ TLL     R    +IL F  KAPA   GYQN  KV YSQNK  A G  R+ TRHIP  P R+LDAP++++DYYLNLL W   ++LAVALGQ VYLWNA NG ITEL +    D +++S++W + G++LAVGT   + Q WD  A  ++R M GH +RVG+LAWN+ +++SGS D+   +HD+R
Sbjct:   21 TKVIPRWKRKAMEKAQQ---SSANASTSAITASSLATTPSRGTKRRGSGTPQCDRFIPNRAAMDMSLGKFAL-QENNPTLGED---GSGAYSPAKEEYQQTLQETLLNG---RTECAKILAFKAKAPAPPVGYQNSLKVLYSQNKASA-GRKRKVTRHIPQAPERVLDAPDMLDDYYLNLLDWNKQNILAVALGQTVYLWNAENGSITELCTTEEPDNFITSLSWIEDGSYLAVGTNTADVQLWDTEASRQVRCMKGHHSRVGSLAWNQFILSSGSRDSMIFNHDVR 296          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15264.3478.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KU25_9PHAE8.640e-10568.25ANAPC4_WD40 domain-containing protein n=2 Tax=Ecto... [more]
W7UCG6_9STRA2.480e-7043.65Cell division cycle 20 n=1 Tax=Nannochloropsis gad... [more]
A0A7S1TZ58_9STRA1.070e-6846.29Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2WBP6_9STRA8.030e-6445.91Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7S3UT71_HETAK6.690e-6349.12Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3GA86_9EUKA3.050e-6147.86Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A0A4D9DDJ3_9STRA2.390e-6054.08Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
A0A7S3VH96_9STRA2.700e-6043.49Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A2R5GRF9_9STRA3.320e-6043.77WD repeat-containing protein slp1 n=1 Tax=Hondaea ... [more]
A0A0L0DAZ6_THETB3.010e-5942.16Cdc20 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15264contigH-elongata_contig15264:5219..6070 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score310.8
Seed ortholog evalue6.3e-82
Seed eggNOG ortholog2880.D7G293
Preferred nameCDC20
KEGG koko:K02084,ko:K03363,ko:K06709
KEGG Pathwayko01524,ko04110,ko04111,ko04113,ko04114,ko04115,ko04120,ko04210,ko04214,ko04215,ko05010,ko05012,ko05014,ko05016,ko05134,ko05152,ko05161,ko05166,ko05200,ko05203,ko05222,map01524,map04110,map04111,map04113,map04114,map04115,map04120,map04210,map04214,map04215,map05010,map05012,map05014,map05016,map05134,map05152,map05161,map05166,map05200,map05203,map05222
KEGG ModuleM00389,M00685
GOsGO:0000003,GO:0000070,GO:0000151,GO:0000152,GO:0000226,GO:0000278,GO:0000280,GO:0000775,GO:0000776,GO:0000819,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005680,GO:0005694,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007052,GO:0007059,GO:0007062,GO:0007064,GO:0007088,GO:0007096,GO:0007127,GO:0007135,GO:0007143,GO:0007144,GO:0007147,GO:0007275,GO:0007276,GO:0007292,GO:0007346,GO:0007399,GO:0008022,GO:0008150,GO:0008152,GO:0008284,GO:0009056,GO:0009057,GO:0009893,GO:0009987,GO:0010498,GO:0010564,GO:0010604,GO:0010646,GO:0010720,GO:0010939,GO:0010941,GO:0010975,GO:0015630,GO:0016043,GO:0016567,GO:0016579,GO:0016740,GO:0019222,GO:0019538,GO:0019787,GO:0019827,GO:0019899,GO:0019941,GO:0019953,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0030154,GO:0030162,GO:0030163,GO:0030718,GO:0031145,GO:0031323,GO:0031325,GO:0031344,GO:0031396,GO:0031398,GO:0031399,GO:0031401,GO:0031461,GO:0031915,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032446,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033043,GO:0036211,GO:0040020,GO:0042127,GO:0042826,GO:0043085,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043632,GO:0043900,GO:0043902,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045595,GO:0045597,GO:0045664,GO:0045787,GO:0048167,GO:0048285,GO:0048471,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048609,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050773,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050803,GO:0050804,GO:0050807,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051225,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051276,GO:0051321,GO:0051338,GO:0051347,GO:0051438,GO:0051443,GO:0051445,GO:0051446,GO:0051603,GO:0051704,GO:0051726,GO:0051783,GO:0051960,GO:0051962,GO:0060255,GO:0060281,GO:0060282,GO:0060284,GO:0060547,GO:0060548,GO:0061630,GO:0061659,GO:0061982,GO:0061983,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070646,GO:0070647,GO:0070925,GO:0071704,GO:0071840,GO:0080090,GO:0090068,GO:0090128,GO:0090129,GO:0090307,GO:0097150,GO:0098687,GO:0098727,GO:0098813,GO:0099177,GO:0120035,GO:0140013,GO:0140014,GO:0140096,GO:1900193,GO:1900195,GO:1901564,GO:1901565,GO:1901575,GO:1901987,GO:1901990,GO:1902494,GO:1902850,GO:1903046,GO:1903047,GO:1903320,GO:1903322,GO:1903429,GO:1903431,GO:1903538,GO:1904146,GO:1904666,GO:1904668,GO:1905879,GO:1905881,GO:1990234,GO:2000026,GO:2000241,GO:2000243
EggNOG free text desc.Cell division cycle
EggNOG OGsCOG2319@1,KOG0305@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03036,ko04121
Hectar predicted targeting categoryother localisation
Exons1
Model size852
Cds size834
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929902.5034723-UTR-H-elongata_contig15264:5218..52361622929902.5034723-UTR-H-elongata_contig15264:5218..5236Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15264 5219..5236 +
1691679201.6026433-UTR-H-elongata_contig15264:5218..52361691679201.6026433-UTR-H-elongata_contig15264:5218..5236Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15264 5219..5236 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929902.528374-CDS-H-elongata_contig15264:5236..60701622929902.528374-CDS-H-elongata_contig15264:5236..6070Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15264 5237..6070 +
1691679201.6196501-CDS-H-elongata_contig15264:5236..60701691679201.6196501-CDS-H-elongata_contig15264:5236..6070Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15264 5237..6070 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15264.3478.1prot_H-elongata_contig15264.3478.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig15264 5237..6070 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig15264.3478.1

>prot_H-elongata_contig15264.3478.1 ID=prot_H-elongata_contig15264.3478.1|Name=mRNA_H-elongata_contig15264.3478.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=278bp
MPRWQRKKLQQQQNQLRNDASVSFSFVTSNRPSSSSSENACVEKRDRFIP
TRSSMCMERSNYLMSKKNNSSDTVDMTRSSGGNAVTPDDFNKLLESTLLG
DPALREGGYRILDFWNKAPAQKEGYQNGFKVFYSQNKDRARGPSRRPTRH
IPSTPVRILDAPNLINDYYLNLLSWGSNDVLAVALGQCVYLWNARNGDIT
ELLSLGAGDYVSSVAWTKSGTHLAVGTTGGETQFWDAAAVTRLRNMNGHS
ARVGALAWNEHLVTSGSMDTTAVHHDLR
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mRNA from alignment at H-elongata_contig15264:5219..6070+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig15264.3478.1 ID=mRNA_H-elongata_contig15264.3478.1|Name=mRNA_H-elongata_contig15264.3478.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=852bp|location=Sequence derived from alignment at H-elongata_contig15264:5219..6070+ (Himanthalia elongata Himel1 dioecious)
CCCTTCACTACGTTGGTGATGCCTCGGTGGCAGCGCAAGAAGCTCCAGCA GCAGCAGAACCAGCTGAGGAATGATGCATCGGTGTCTTTTTCGTTCGTGA CATCGAACCGTCCTTCATCATCATCTTCAGAGAACGCATGTGTGGAGAAG CGCGACCGCTTCATCCCCACTCGTTCCTCTATGTGCATGGAACGGTCGAA CTACCTCATGAGCAAGAAGAACAACAGCAGCGACACCGTGGATATGACCC GATCGAGCGGTGGTAACGCAGTGACCCCCGACGACTTTAACAAGCTACTC GAGTCTACCCTGCTGGGAGACCCAGCACTCCGCGAGGGTGGCTATCGCAT TCTGGACTTCTGGAACAAGGCGCCAGCGCAGAAGGAGGGTTACCAAAATG GGTTCAAGGTATTCTACAGCCAGAACAAGGACCGGGCGAGAGGGCCCTCG AGGCGTCCCACCCGTCACATACCCTCCACTCCTGTCCGCATTCTTGATGC GCCGAACCTGATCAACGACTACTACCTCAACCTACTCTCGTGGGGATCGA ACGATGTGCTTGCGGTAGCTCTCGGCCAGTGCGTATACCTCTGGAACGCA AGGAACGGGGACATCACCGAGCTGCTCAGCCTCGGAGCTGGAGACTATGT CTCTTCGGTCGCCTGGACCAAGAGCGGGACGCACCTTGCCGTCGGTACCA CAGGCGGCGAGACGCAGTTCTGGGATGCCGCCGCGGTCACCCGTCTGCGC AACATGAACGGCCACAGCGCTCGCGTGGGCGCGCTTGCGTGGAACGAACA CCTCGTGACGTCGGGATCGATGGACACGACGGCTGTGCACCACGACCTCC GT
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Coding sequence (CDS) from alignment at H-elongata_contig15264:5219..6070+

>mRNA_H-elongata_contig15264.3478.1 ID=mRNA_H-elongata_contig15264.3478.1|Name=mRNA_H-elongata_contig15264.3478.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1668bp|location=Sequence derived from alignment at H-elongata_contig15264:5219..6070+ (Himanthalia elongata Himel1 dioecious)
ATGCCTCGGTGGCAGCGCAAGAAGCTCCAGCAGCAGCAGAACCAGCTGAG
GAATGATGCATCGGTGTCTTTTTCGTTCGTGACATCGAACCGTCCTTCAT
CATCATCTTCAGAGAACGCATGTGTGGAGAAGCGCGACCGCTTCATCCCC
ACTCGTTCCTCTATGTGCATGGAACGGTCGAACTACCTCATGAGCAAGAA
GAACAACAGCAGCGACACCGTGGATATGACCCGATCGAGCGGTGGTAACG
CAGTGACCCCCGACGACTTTAACAAGCTACTCGAGTCTACCCTGCTGGGA
GACCCAGCACTCCGCGAGGGTGGCTATCGCATTCTGGACTTCTGGAACAA
GGCGCCAGCGCAGAAGGAGGGTTACCAAAATGGGTTCAAGGTATTCTACA
GCCAGAACAAGGACCGGGCGAGAGGGCCCTCGAGGCGTCCCACCCGTCAC
ATACCCTCCACTCCTGTCCGCATTCTTGATGCGCCGAACCTGATCAACGA
CTACTACCTCAACCTACTCTCGTGGGGATCGAACGATGTGCTTGCGGTAG
CTCTCGGCCAGTGCGTATACCTCTGGAACGCAAGGAACGGGGACATCACC
GAGCTGCTCAGCCTCGGAGCTGGAGACTATGTCTCTTCGGTCGCCTGGAC
CAAGAGCGGGACGCACCTTGCCGTCGGTACCACAGGCGGCGAGACGCAGT
TCTGGGATGCCGCCGCGGTCACCCGTCTGCGCAACATGAACGGCCACAGC
GCTCGCGTGGGCGCGCTTGCGTGGAACGAACACCTCGTGACGTCGGGATC
GATGGACACGACGGCTGTGCACCACGACCTCCGTATGCCTCGGTGGCAGC
GCAAGAAGCTCCAGCAGCAGCAGAACCAGCTGAGGAATGATGCATCGGTG
TCTTTTTCGTTCGTGACATCGAACCGTCCTTCATCATCATCTTCAGAGAA
CGCATGTGTGGAGAAGCGCGACCGCTTCATCCCCACTCGTTCCTCTATGT
GCATGGAACGGTCGAACTACCTCATGAGCAAGAAGAACAACAGCAGCGAC
ACCGTGGATATGACCCGATCGAGCGGTGGTAACGCAGTGACCCCCGACGA
CTTTAACAAGCTACTCGAGTCTACCCTGCTGGGAGACCCAGCACTCCGCG
AGGGTGGCTATCGCATTCTGGACTTCTGGAACAAGGCGCCAGCGCAGAAG
GAGGGTTACCAAAATGGGTTCAAGGTATTCTACAGCCAGAACAAGGACCG
GGCGAGAGGGCCCTCGAGGCGTCCCACCCGTCACATACCCTCCACTCCTG
TCCGCATTCTTGATGCGCCGAACCTGATCAACGACTACTACCTCAACCTA
CTCTCGTGGGGATCGAACGATGTGCTTGCGGTAGCTCTCGGCCAGTGCGT
ATACCTCTGGAACGCAAGGAACGGGGACATCACCGAGCTGCTCAGCCTCG
GAGCTGGAGACTATGTCTCTTCGGTCGCCTGGACCAAGAGCGGGACGCAC
CTTGCCGTCGGTACCACAGGCGGCGAGACGCAGTTCTGGGATGCCGCCGC
GGTCACCCGTCTGCGCAACATGAACGGCCACAGCGCTCGCGTGGGCGCGC
TTGCGTGGAACGAACACCTCGTGACGTCGGGATCGATGGACACGACGGCT
GTGCACCACGACCTCCGT
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