prot_H-elongata_contig152461.3462.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig152461.3462.1
Unique Nameprot_H-elongata_contig152461.3462.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length86
Homology
BLAST of mRNA_H-elongata_contig152461.3462.1 vs. uniprot
Match: D8LTL4_ECTSI (TPT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTL4_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 2.450e-29
Identity = 58/86 (67.44%), Postives = 73/86 (84.88%), Query Frame = 0
Query:    1 CSISPIPFISSQALAYNFEVKMTFLLVVMQCLVATVIVEVVRRLGFAKYDPFNFKTARRWLPVSLCFSAMLFTSFKALAIMNVPMV 86
            CS+S +  +S++ LA+ ++  M FL+VV QCLVAT++VE VRR+G+A YDPFNF TARRWLPVS+CFSAMLFTSFKAL +MNVPMV
Sbjct:   36 CSVSMV--MSNKLLAFTYKSDMAFLVVVGQCLVATILVEAVRRMGYASYDPFNFSTARRWLPVSICFSAMLFTSFKALEVMNVPMV 119          
BLAST of mRNA_H-elongata_contig152461.3462.1 vs. uniprot
Match: A0A1S7HUV8_9SACH (GDP-mannose transporter n=3 Tax=Zygosaccharomyces TaxID=4953 RepID=A0A1S7HUV8_9SACH)

HSP 1 Score: 58.9 bits (141), Expect = 3.060e-8
Identity = 29/84 (34.52%), Postives = 54/84 (64.29%), Query Frame = 0
Query:    1 CSISPIPFISSQALAYNFEVKMTFLLVVMQCLVATVIVEVVRRLGFAKYDPFNFKTARRWLPVSLCFSAMLFTSFKALAIMNVP 84
            C  S +  ++++ +    +  M F+++V+QCLV T+++ V++ LG+AK+ P N    + WLP+S+    M++TS KAL ++ VP
Sbjct:   27 CCSSILMTVTNKFVVNKNDFNMFFIMLVVQCLVCTMVLVVLKGLGYAKFRPLNKTDIKSWLPISVLLVLMIYTSSKALNLLAVP 110          
BLAST of mRNA_H-elongata_contig152461.3462.1 vs. uniprot
Match: A0A4C2EAD5_9SACH (GDP-mannose transporter n=4 Tax=Zygosaccharomyces TaxID=4953 RepID=A0A4C2EAD5_9SACH)

HSP 1 Score: 58.5 bits (140), Expect = 4.200e-8
Identity = 29/84 (34.52%), Postives = 53/84 (63.10%), Query Frame = 0
Query:    1 CSISPIPFISSQALAYNFEVKMTFLLVVMQCLVATVIVEVVRRLGFAKYDPFNFKTARRWLPVSLCFSAMLFTSFKALAIMNVP 84
            C  S +  ++++ +    +  M F+++V+QCLV T+++ V++ LG+AK+ P N    + WLP+S     M++TS KAL ++ VP
Sbjct:   27 CCSSILMTVTNKFVVNKKDFNMFFVMLVVQCLVCTLVLVVLKGLGYAKFRPLNKTDIKNWLPISFLLVLMIYTSSKALNLLPVP 110          
BLAST of mRNA_H-elongata_contig152461.3462.1 vs. uniprot
Match: Q9BIR6_LEIMA (Lipophosphoglycan biosynthetic protein n=10 Tax=Leishmania TaxID=38568 RepID=Q9BIR6_LEIMA)

HSP 1 Score: 55.1 bits (131), Expect = 7.050e-7
Identity = 32/83 (38.55%), Postives = 53/83 (63.86%), Query Frame = 0
Query:    1 CSISPIPFISSQALAYNFEVKMTFLLVVMQCLVATVIVEVVRRLGFAKYDPFNFKTARRWLPVSLCFSAMLFTSFKALAIMNV 83
            CS+S I  + ++ +   +++   F ++V+Q   A VIV + +   F +Y  F+F  A++WLP++L F AMLFTS K+LA M+V
Sbjct:   20 CSVSMI--LVNKLIMNTYDMNFPFGILVLQTGGALVIVALAKAARFVEYPAFSFDVAKKWLPLTLLFVAMLFTSMKSLATMSV 100          
BLAST of mRNA_H-elongata_contig152461.3462.1 vs. uniprot
Match: GMT1_VANPO (GDP-mannose transporter 1 n=1 Tax=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) TaxID=436907 RepID=GMT1_VANPO)

HSP 1 Score: 53.9 bits (128), Expect = 1.790e-6
Identity = 26/84 (30.95%), Postives = 52/84 (61.90%), Query Frame = 0
Query:    1 CSISPIPFISSQALAYNFEVKMTFLLVVMQCLVATVIVEVVRRLGFAKYDPFNFKTARRWLPVSLCFSAMLFTSFKALAIMNVP 84
            C+ S +  ++++ +    +  M F+++ +Q  V T+++ +++ LG+AK+ PFN   A+ W P+S+    M++TS KAL  + VP
Sbjct:   27 CASSILMTVTNKFVVNLKDFNMNFVMLFVQSFVCTLLLVILKTLGYAKFRPFNKTDAKNWFPISVLLVIMIYTSSKALQFLAVP 110          
BLAST of mRNA_H-elongata_contig152461.3462.1 vs. uniprot
Match: A0A1E5R1K1_9ASCO (GDP-mannose transporter n=1 Tax=Hanseniaspora osmophila TaxID=56408 RepID=A0A1E5R1K1_9ASCO)

HSP 1 Score: 52.0 bits (123), Expect = 8.670e-6
Identity = 27/68 (39.71%), Postives = 44/68 (64.71%), Query Frame = 0
Query:   17 NFEVKMTFLLVVMQCLVATVIVEVVRRLGFAKYDPFNFKTARRWLPVSLCFSAMLFTSFKALAIMNVP 84
            NF   M F+++ +QC V T+++ V++ LG+AK+   N   A+ WLP+S+    M++TS KAL  + VP
Sbjct:   46 NFN--MNFVMLFVQCTVCTLLLVVLKLLGYAKFRSLNKTDAKNWLPISVLLVLMIYTSSKALQFLPVP 111          
BLAST of mRNA_H-elongata_contig152461.3462.1 vs. uniprot
Match: G8BTX2_TETPH (GDP-mannose transporter n=1 Tax=Tetrapisispora phaffii (strain ATCC 24235 / CBS 4417 / NBRC 1672 / NRRL Y-8282 / UCD 70-5) TaxID=1071381 RepID=G8BTX2_TETPH)

HSP 1 Score: 50.8 bits (120), Expect = 2.220e-5
Identity = 26/84 (30.95%), Postives = 49/84 (58.33%), Query Frame = 0
Query:    1 CSISPIPFISSQALAYNFEVKMTFLLVVMQCLVATVIVEVVRRLGFAKYDPFNFKTARRWLPVSLCFSAMLFTSFKALAIMNVP 84
            C  S +  ++++ +       M F+++ +Q  V T+++ V++ LG+AK+  FN   A+ WLP+S     M++TS KAL  + +P
Sbjct:   28 CLSSILMTVTNKFVVNGANFNMNFVMLFVQSAVCTLLLIVLKTLGYAKFRAFNKTDAKNWLPISFLLVLMIYTSSKALQFLAIP 111          
BLAST of mRNA_H-elongata_contig152461.3462.1 vs. uniprot
Match: A0A640KSM1_LEITA (Lipophosphoglycan biosynthetic protein (Lpg2) n=1 Tax=Leishmania tarentolae TaxID=5689 RepID=A0A640KSM1_LEITA)

HSP 1 Score: 50.4 bits (119), Expect = 3.040e-5
Identity = 30/83 (36.14%), Postives = 51/83 (61.45%), Query Frame = 0
Query:    1 CSISPIPFISSQALAYNFEVKMTFLLVVMQCLVATVIVEVVRRLGFAKYDPFNFKTARRWLPVSLCFSAMLFTSFKALAIMNV 83
            CS+S I  + ++ +   F++     ++V+Q   A VIV + +   F +Y  F+ + A++WLP++L F AMLFTS K+L  M+V
Sbjct:   20 CSVSMI--LVNKLIMNTFDMNFPLGILVLQSGGAVVIVTLAKAARFIEYPAFSLEVAKQWLPLTLLFVAMLFTSMKSLGTMSV 100          
BLAST of mRNA_H-elongata_contig152461.3462.1 vs. uniprot
Match: J7RG40_KAZNA (GDP-mannose transporter n=1 Tax=Kazachstania naganishii (strain ATCC MYA-139 / BCRC 22969 / CBS 8797 / KCTC 17520 / NBRC 10181 / NCYC 3082 / Yp74L-3) TaxID=1071383 RepID=J7RG40_KAZNA)

HSP 1 Score: 50.1 bits (118), Expect = 4.150e-5
Identity = 27/84 (32.14%), Postives = 49/84 (58.33%), Query Frame = 0
Query:    1 CSISPIPFISSQALAYNFEVKMTFLLVVMQCLVATVIVEVVRRLGFAKYDPFNFKTARRWLPVSLCFSAMLFTSFKALAIMNVP 84
            C  S +  ++++ +       M F+++ +Q LV T+++ V+R LG+AK+   N   A+ W P+S+    M++TS KAL  + VP
Sbjct:   28 CGSSILMTVTNKFVVNLENFNMNFVMLFVQSLVCTLLLVVLRLLGYAKFRSLNKTDAKNWFPISVLLVLMIYTSSKALQFLAVP 111          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig152461.3462.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LTL4_ECTSI2.450e-2967.44TPT domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A1S7HUV8_9SACH3.060e-834.52GDP-mannose transporter n=3 Tax=Zygosaccharomyces ... [more]
A0A4C2EAD5_9SACH4.200e-834.52GDP-mannose transporter n=4 Tax=Zygosaccharomyces ... [more]
Q9BIR6_LEIMA7.050e-738.55Lipophosphoglycan biosynthetic protein n=10 Tax=Le... [more]
GMT1_VANPO1.790e-630.95GDP-mannose transporter 1 n=1 Tax=Vanderwaltozyma ... [more]
A0A1E5R1K1_9ASCO8.670e-639.71GDP-mannose transporter n=1 Tax=Hanseniaspora osmo... [more]
G8BTX2_TETPH2.220e-530.95GDP-mannose transporter n=1 Tax=Tetrapisispora pha... [more]
A0A640KSM1_LEITA3.040e-536.14Lipophosphoglycan biosynthetic protein (Lpg2) n=1 ... [more]
J7RG40_KAZNA4.150e-532.14GDP-mannose transporter n=1 Tax=Kazachstania nagan... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038736GDP-mannose transporter Vrg4-likePANTHERPTHR11132:SF251GDP-MANNOSE TRANSPORTER 1-RELATEDcoord: 17..86
NoneNo IPR availablePANTHERPTHR11132SOLUTE CARRIER FAMILY 35coord: 17..86
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 42..60
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 82..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 61..81
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..21
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 22..41
NoneNo IPR availableTMHMMTMhelixcoord: 61..83
NoneNo IPR availableTMHMMTMhelixcoord: 22..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig152461contigH-elongata_contig152461:1226..1483 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig152461.3462.1mRNA_H-elongata_contig152461.3462.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig152461 1226..1483 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig152461.3462.1 ID=prot_H-elongata_contig152461.3462.1|Name=mRNA_H-elongata_contig152461.3462.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=86bp
CSISPIPFISSQALAYNFEVKMTFLLVVMQCLVATVIVEVVRRLGFAKYD
PFNFKTARRWLPVSLCFSAMLFTSFKALAIMNVPMV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038736Vrg4-like