mRNA_H-elongata_contig10409.341.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig10409.341.1 vs. uniprot
Match: D8LRM2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM2_ECTSI) HSP 1 Score: 386 bits (992), Expect = 2.610e-122 Identity = 260/481 (54.05%), Postives = 340/481 (70.69%), Query Frame = 1
Query: 1 ESILPDEDVITSLARGQAVQKNVQETLASLASALSAASNPD-IIPAVRRRFYERVEACADVDKATEEARREKEKRDMTDKACSKREAVLCEEVRRLEKGLSAAEEIHQGTQREAKAAANIAQAEITRQRERAEAAKKNAGEWNRKAEAGESRLESMKAEVGALHEAMACLHGEMGAVQRELDGAKASQDKLIKDLAQAESHAHKNQESLSVALVRVKDAEKRLRKESSEKDRLSEELRKVNNDVSRQNKADKSALTAEINRLKKSDDANRESGDKLNATNRDLNALLQRLSTELEQLQETTEFDTKRANASERKVRDREEEVRRLGEALAATESRLANASRETNLIKDALSKSSVEGQNNLAEIERQRGELELLEREKQDMIFDVQERVRAFKASDETTVELERHKELVAEVDKISEQHISAKLDAEDREKKALSELDEARCATALRDKRIEALRSELFALQQTVEQTSATAKSRDKESAQ 1440
+S+LPDEDV+T L +GQAV+ +V+E LA LASALS+ S+ D II V+ RF ER EA AD+ + TEEAR EKE+RD +KA + RE+ L EV RLE+ + AE TQRE + AA A EI+R RE++ +A+K+A W ++A AGE RLESM AEV ALHEAMA LHGEMGAVQRELDG K SQDKL DL++AE K+QE+ + + KDAEKRLRKE+ E++R+S EL K+ +S++ + LTAEI RLK+S+ +R DKLNATNR+LNALLQ LST+LE+ + E KRA A +V +E +V+R+ EALAATE+RLA + R+ L+K+ALSKSS E AE +RQRGEL+LLEREK D++ DVQERVR K E T + ER++E + + + ++ SA L AE KK L EL EAR T ++D+RIEALRSEL L++T+EQT+ AK+RD+ESAQ
Sbjct: 17 DSLLPDEDVVTKLQQGQAVKADVREALARLASALSSVSDNDTIIRTVKHRFDERKEARADLWRVTEEARAEKERRDCLNKAQADRESALQNEVERLERAVKIAENSCTDTQREGERAAASADKEISRLREKSSSAEKDAATWQQRANAGELRLESMTAEVSALHEAMAGLHGEMGAVQRELDGTKTSQDKLAADLSRAEGRYRKSQEACLSTIAKAKDAEKRLRKETEERERVSAELEKLVQ-MSKEEETKNVTLTAEIKRLKESEGVHRSGSDKLNATNRELNALLQSLSTDLEEAKAAGESSGKRAEALAHEVGVKEGDVQRVREALAATEARLAASGRDKELLKEALSKSSAEAHAKTAEFDRQRGELDLLEREKHDLVLDVQERVRVHK---EATADAERYRERLEQAENRLKEGESATLAAELSRKKTLDELGEARRGTVMQDERIEALRSELTTLRRTLEQTTEAAKARDRESAQ 493 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10409.341.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig10409.341.1 >prot_H-elongata_contig10409.341.1 ID=prot_H-elongata_contig10409.341.1|Name=mRNA_H-elongata_contig10409.341.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=480bp ESILPDEDVITSLARGQAVQKNVQETLASLASALSAASNPDIIPAVRRRFback to top mRNA from alignment at H-elongata_contig10409:3846..8696+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig10409.341.1 ID=mRNA_H-elongata_contig10409.341.1|Name=mRNA_H-elongata_contig10409.341.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4851bp|location=Sequence derived from alignment at H-elongata_contig10409:3846..8696+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig10409:3846..8696+ >mRNA_H-elongata_contig10409.341.1 ID=mRNA_H-elongata_contig10409.341.1|Name=mRNA_H-elongata_contig10409.341.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2880bp|location=Sequence derived from alignment at H-elongata_contig10409:3846..8696+ (Himanthalia elongata Himel1 dioecious)back to top |