mRNA_H-elongata_contig150386.3362.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig150386.3362.1 vs. uniprot
Match: D7G7L2_ECTSI (G-patch_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7L2_ECTSI) HSP 1 Score: 185 bits (469), Expect = 9.480e-52 Identity = 114/241 (47.30%), Postives = 140/241 (58.09%), Query Frame = 1
Query: 1 RDYVIGIGEGKVVTKDVTVERGPLVIPIAENSWK----------------------QPAKAEE---EKSLDQMAAEAIAQESRLEVRGDLRIGGTKSNGLGLDSRSARVIAM--------------------------AARPSVGWLQQNMVPGLAGVDGENAKFKHHLSHCAEDVNVRSQAYAETPVSEFGAAMLRGMGWEGPQGDDAT------GSNLVKELEPRHHRLGLGAHPKPPE 552
RDYV GIG GKVVTK+V V+RGP VI +A N W +P AEE EKSLDQ+AAEAIA+ES VRGD G+ ++ GL S RVI M ++ + G L+QNM+PGL VDGE+AKF+H L H AED + RS+AY + PV+EFGAA+LRGMGW+GP+GD G +L K++EPRHHRLGLGA PKPPE
Sbjct: 61 RDYVTGIGGGKVVTKEVVVDRGPRVIALASNPWANGSNAAAAAXXXXXXXXXXXXXRPPTAEEPAGEKSLDQLAAEAIAKES---VRGD----GSSADAFGLGLDSDRVIGMIGKNPAAGEGDSSNGAATAKTTPDAAGSKRNTGLLEQNMIPGLMEVDGEDAKFRHDLGHRAEDFSARSKAYVDVPVAEFGAALLRGMGWKGPEGDGXXXXXXXXGPDLSKDIEPRHHRLGLGAQPKPPE 294
BLAST of mRNA_H-elongata_contig150386.3362.1 vs. uniprot
Match: A0A067CMB8_SAPPC (G-patch_2 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CMB8_SAPPC) HSP 1 Score: 118 bits (296), Expect = 2.340e-29 Identity = 74/190 (38.95%), Postives = 100/190 (52.63%), Query Frame = 1
Query: 1 RDYVIGIG-EGKVVTKDVTVERGPLVIPIAENSWKQPAKAEEEKSLDQMAAEAIAQESRLEVRGDLRIGGTKSNGLGLDSRSARVIAMAARPSVG----WLQQNMVPGLAGVDGENAKFKHHLSHCAEDVNVRSQAYAETPVSEFGAAMLRGMGWEGPQGDDATGSNLVKELEPRHHRLGLGAHPKPPEP 555
+D V+G G GK + KD + LVIP+ E +W + E D AAEA+ + R G+ S VI +A +P+VG L +N +PGL + EN KFKH +S +D+++ S AY P+ EFGAA+LRGMGW G TGS +++ RH RLGLGA PKPP P
Sbjct: 35 KDLVLGFGTSGKALLKDPVAAKAKLVIPLIEQTWTEKGATE----ADSAAAEALLADIRSSAMGESA------------EDSTMVIPVAKKPAVGDDAPILFRNKLPGLENLTNENDKFKHDISMRPDDMDIHSDAYEAVPIEEFGAALLRGMGWSGKDRVQPTGS----KVQMRHQRLGLGATPKPPMP 204
BLAST of mRNA_H-elongata_contig150386.3362.1 vs. uniprot
Match: A0A1V9Z1I1_9STRA (G-patch_2 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z1I1_9STRA) HSP 1 Score: 115 bits (287), Expect = 5.680e-28 Identity = 71/186 (38.17%), Postives = 101/186 (54.30%), Query Frame = 1
Query: 1 RDYVIGIG-EGKVVTKDVTVERGPLVIPIAENSWKQPAKAEEEKSLDQMAAEAIAQESRLEVRGDLRIGGTKSNGLGLDSRSARVIAMAARPS--VGWLQQNMVPGLAGVDGENAKFKHHLSHCAEDVNVRSQAYAETPVSEFGAAMLRGMGWEGPQGDDATGSNLVKELEPRHHRLGLGAHPKPP 549
+D V+G G GK + K+ PLVIP+ E +W + +E DQ AA A+ + +L + + S+ VI + A+ L +N VPG G+ EN KFKH +SH +D+++ S+AY P+ EFGAA+LRGMGW G ATGS +++ RH RLGLGA P+PP
Sbjct: 33 KDIVLGFGTSGKALLKNPVAANAPLVIPLIEQNWSKQGASE----ADQEAAAALLADIQLTTGDETKY------------ESSLVIPVDAKTEKDAPILFRNKVPGADGMTNENDKFKHDISHRPDDMDIHSEAYEAVPIEEFGAALLRGMGWSGKDRVKATGS----KVQMRHQRLGLGATPRPP 198
BLAST of mRNA_H-elongata_contig150386.3362.1 vs. uniprot
Match: A0A835ZCA3_9STRA (DExH-box splicing factor binding site-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCA3_9STRA) HSP 1 Score: 117 bits (292), Expect = 1.350e-27 Identity = 71/150 (47.33%), Postives = 90/150 (60.00%), Query Frame = 1
Query: 124 EKSLDQMAAEAIAQESRLEVRGDLRIGGTKSNGLGLDSRSARVIAMAARPSVGW-----LQQNMVPGLAGV-DGENAKFKHHLSHCAEDVNVRSQAYAETPVSEFGAAMLRGMGWEGPQGDDATGS-NLVKELEPRHHRLGLGAHPKPPE 552
EKSLD++AAE + +E+ E R R GLGLDS + +AA + G L+ M+PGL V G+ AK KH L+ A D++ +S Y PV EFGAA+LRGMGW GP +D G+ N + EPRHHRLGLGA PKPPE
Sbjct: 10 EKSLDELAAEELVREADEERRQLQRNSRGTDAGLGLDSDRVIAMKVAAEQAAGARKRGILEAAMIPGLNEVAGGDGAKLKHDLAIRAADIDAKSDVYRHVPVEEFGAALLRGMGWAGPAPEDKEGNANPLGTAEPRHHRLGLGAAPKPPE 159
BLAST of mRNA_H-elongata_contig150386.3362.1 vs. uniprot
Match: A0A1V9YAW8_9STRA (G-patch_2 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YAW8_9STRA) HSP 1 Score: 108 bits (269), Expect = 4.490e-25 Identity = 71/186 (38.17%), Postives = 96/186 (51.61%), Query Frame = 1
Query: 1 RDYVIGIGE-GKVVTKDVTVERGPLVIPIAENSWKQPAKAEEEKSLDQMAAEAIAQESRLEVRGDLRIGGTKSNGLGLDSRSARVIAMAARPSVGWLQQNMVPGLAGVDGENAKFKHHLSHCAEDVNVRSQAYAETPVSEFGAAMLRGMGWEGPQGDDATGSNLVKELEPRHHRLGLGAHPKPPEP 555
+D V+G GK + KD + LVIP+ E +W + +E D AA A+ + R GD T L A+VI P L +N +PG+ + EN KFKH +S +D+++ S AY P+ EFGAA+LRGMGW G TGS +++ RH RLGLGA PKPP P
Sbjct: 34 KDIVLGFASTGKALLKDPVAAKAQLVIPLIEQNWAEKGASE----ADSAAATALLADIRATTAGDTAEEST------LVIPVAKVIKANDTPI---LFRNKLPGIENLANENDKFKHDISLRPDDMDIHSDAYEAVPIEEFGAALLRGMGWTGKDRVQPTGS----KVQMRHQRLGLGATPKPPMP 202
BLAST of mRNA_H-elongata_contig150386.3362.1 vs. uniprot
Match: A0A485LIS8_9STRA (Aste57867_21911 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIS8_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.890e-23 Identity = 66/186 (35.48%), Postives = 101/186 (54.30%), Query Frame = 1
Query: 1 RDYVIGIG-EGKVVTKDVTVERGPLVIPIAENSWKQPAKAEEEKSLDQMAAEAIAQ---ESRLEVRGDLRIGGTKSNGLGLDSRSARVIAMAARPSVGWLQQNMVPGLAGVDGENAKFKHHLSHCAEDVNVRSQAYAETPVSEFGAAMLRGMGWEGPQGDDATGSNLVKELEPRHHRLGLGAHPKP 546
+D V+G G V KD + GPLVIP + +W +A E D A+ + A+ ES L + + G TK++ S +++ + +R N +PG+ V G+ KFKH LS +++++ S A+ P+ EFGAA+LRGMGW G + TG+ +++ RH+RLGLGA PKP
Sbjct: 36 KDIVLGFSTSGDAVLKDPSAASGPLVIPCIKQNWTADEEAAEALLADIRASSSKAEDAEESTLVI--PIAGGDTKTSDPSSSSTASKEAPLLSR--------NRIPGMENVAGDKNKFKHDLSMRPDELDIHSDAFDAVPIEEFGAALLRGMGWTGKDRVEPTGA----KVQMRHYRLGLGATPKP 207
BLAST of mRNA_H-elongata_contig150386.3362.1 vs. uniprot
Match: A0A6G0WSD4_9STRA (G-patch_2 domain-containing protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WSD4_9STRA) HSP 1 Score: 101 bits (251), Expect = 4.320e-23 Identity = 65/189 (34.39%), Postives = 99/189 (52.38%), Query Frame = 1
Query: 1 RDYVIGIG-EGKVVTKDVTVERGPLVIPIAENSWKQPAKAEEEKSLDQMAAEAIAQESRLEVRGDLRIGGTK------SNGLGLDSRSARVIAMAARPSVGWLQQNMVPGLAGVDGENAKFKHHLSHCAEDVNVRSQAYAETPVSEFGAAMLRGMGWEGPQGDDATGSNLVKELEPRHHRLGLGAHPKP 546
+D V+G +G V KD +V GPLVIP + +W DQ AA+A+ + R D G+ +N D++ ++ A L +N +PG+ V G+ KFKH ++ +++++ S A+ P+ EFGA +LRGMGW G +ATGS +++ RH+RLGLGA PKP
Sbjct: 32 KDIVVGFSTDGDAVLKDPSVANGPLVIPCIKENW----------GADQEAADALLADIRASSTKDPNAEGSTLVIPIANNDETRDNKKPKLDKDAPL-----LSRNRIPGMDKVVGDKDKFKHDVAMRPDELDIHSDAFEAVPIEEFGAGLLRGMGWTGKDRIEATGS----KVQMRHYRLGLGATPKP 201
BLAST of mRNA_H-elongata_contig150386.3362.1 vs. uniprot
Match: A0A024THQ2_9STRA (G-patch_2 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024THQ2_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 3.620e-21 Identity = 66/194 (34.02%), Postives = 98/194 (50.52%), Query Frame = 1
Query: 1 RDYVIGIG-EGKVVTKDVTV--ERGPLVIPIAENSWKQPAKAEEEKSLDQMAAEAIAQESRLEVRGDLRIGGTKSNGLGLDSRSARVIAMAA---------RPSVGWLQQNMVPGLAGVDGENAKFKHHLSHCAEDVNVRSQAYAETPVSEFGAAMLRGMGWEGPQGDDATGSNLVKELEPRHHRLGLGAHPKP 546
++ V+G G + KD + GPLVIP + +W + DQ AAEA+ ++ R R + + S VI M A + L +N +PG+ + GE KFKH LS +++++ S+A+ P+ EFGAA+LRGMGW G + TGS +++ RH+RLGLGA PKP
Sbjct: 39 KEIVVGFTTSGDALLKDPLAGSKNGPLVIPCIKANWTE----------DQKAAEALLEDIRNSSRKEQEDA----------AESTLVIPMGAAEEXXXXXXKKDAPMLTRNRIPGMDKIVGETNKFKHDLSMRPDELDIHSEAFEAVPIEEFGAALLRGMGWTGKDRVEPTGS----KVQMRHYRLGLGATPKP 208
BLAST of mRNA_H-elongata_contig150386.3362.1 vs. uniprot
Match: W4GHW1_9STRA (G-patch_2 domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GHW1_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 1.200e-20 Identity = 65/196 (33.16%), Postives = 100/196 (51.02%), Query Frame = 1
Query: 1 RDYVIGIG-EGKVVTKDVTV--ERGPLVIPIAENSWKQPAKAEEEKSLDQMAAEAIAQESRLEVRGDLR-----------IGGTKSNGLGLDSRSARVIAMAARPSVGWLQQNMVPGLAGVDGENAKFKHHLSHCAEDVNVRSQAYAETPVSEFGAAMLRGMGWEGPQGDDATGSNLVKELEPRHHRLGLGAHPKP 546
++ V+G G + K+ +V + GP+VIP + +W + DQ AAEA+ + R R + GGT N ++ + A + L +N +PG+ + GE KFKH LS +++++ S A+ P+ EFGAA+LRGMGW G + TGS +++ RH+RLGLGA PKP
Sbjct: 41 KEIVVGFSTSGDALLKEPSVGSKYGPMVIPCIKVNWTE----------DQAAAEALLADIRNSSRQEQEESEESTLVIPIAGGTVENTSDINKKDAPM-----------LTRNRIPGMDKIVGETNKFKHDLSMRPDELDIHSDAFDAVPIEEFGAALLRGMGWTGKDRVEPTGS----KVQMRHYRLGLGATPKP 211
BLAST of mRNA_H-elongata_contig150386.3362.1 vs. uniprot
Match: A0A7S3XXE9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXE9_HETAK) HSP 1 Score: 93.2 bits (230), Expect = 2.530e-20 Identity = 72/204 (35.29%), Postives = 95/204 (46.57%), Query Frame = 1
Query: 64 GPLVIPIAENSWK----------------------------QPAKAE---EEKSLDQMAAEAIAQESRLEVRGDLRIGGTKSNGLGLDSRSARVI-----------AMAARP-SVGWLQQNMVPGLAGVDGENAKFKHHLSHCAEDVNVRSQAYAETPVSEFGAAMLRGMGWEGPQGDDATGSNLVKELEPRHHRLGLGAHPKP 546
GPLVIP+A N+W +PAK E +E +L++ AAE + +E R E G +SR R+ A AAR S+ L N +PGL + + +F + AED++ +S+AY PV EFGAAMLRGMGW GP D + + L PRH RLGLGA PKP
Sbjct: 12 GPLVIPLATNNWTKKDGDDGDKHPTTQKDEPAAAKKDAPSGEPAKGEAPIKELTLEEKAAEELIEEIRRET--------------GKESRKQRMFHTDKIIQLDAAAEAARDKSLPTLIANAIPGLKEIADDQERFLKDVGMRAEDMDFKSEAYRAVPVEEFGAAMLRGMGWAGPPEGDGEPAE-EEPLAPRHFRLGLGAEPKP 200 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig150386.3362.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig150386.3362.1 >prot_H-elongata_contig150386.3362.1 ID=prot_H-elongata_contig150386.3362.1|Name=mRNA_H-elongata_contig150386.3362.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=185bp RDYVIGIGEGKVVTKDVTVERGPLVIPIAENSWKQPAKAEEEKSLDQMAAback to top mRNA from alignment at H-elongata_contig150386:312..923- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig150386.3362.1 ID=mRNA_H-elongata_contig150386.3362.1|Name=mRNA_H-elongata_contig150386.3362.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=612bp|location=Sequence derived from alignment at H-elongata_contig150386:312..923- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig150386:312..923- >mRNA_H-elongata_contig150386.3362.1 ID=mRNA_H-elongata_contig150386.3362.1|Name=mRNA_H-elongata_contig150386.3362.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1110bp|location=Sequence derived from alignment at H-elongata_contig150386:312..923- (Himanthalia elongata Himel1 dioecious)back to top |