prot_H-elongata_contig14973.3326.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig14973.3326.1
Unique Nameprot_H-elongata_contig14973.3326.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length230
Homology
BLAST of mRNA_H-elongata_contig14973.3326.1 vs. uniprot
Match: D7FM07_ECTSI (Carnitine/acylcarnitine carrier protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM07_ECTSI)

HSP 1 Score: 237 bits (605), Expect = 1.180e-75
Identity = 123/221 (55.66%), Postives = 150/221 (67.87%), Query Frame = 0
Query:    5 FILRRRGADEGAHMTKLEMACAGSFAGIANSPMRQVVERVKSVMQVQRAGKYISPYSWSGACAVDLVRREGFGMGLFRGNTATAVREAVQLAIYYPTVSSVFPNPVVFVSNDLASAGHVVYFISEDRARHSGVPEPLLQMLAGGLAGCAMWLPPVYTLDVLKTRMQTAAPGVYKNMWDCAAKTWRTEGLQMFYRGLGPSFLRAFPMHGLVFVGYEATVSIL 225
            F+LRRR A     +T  E   AG++AG+ N+PMRQV ERVK VMQV++  K  SPYSWSGAC VDLVRREG  MGL RG  AT +RE +Q  IYYP+           ++ D        YF+  DR   + VPEP+L  LAGGLAGC MWLPP+Y LDV+KTRMQTA PGVY+ + DC  KT R EG+ + +RGLG + LRAFPMHGLVF+GYE T+ +L
Sbjct:   12 FLLRRREAKATDKLTLPEKGIAGAWAGVMNAPMRQVFERVKGVMQVRQGKKLQSPYSWSGACVVDLVRREGIAMGLCRGMGATMLREPLQFGIYYPSYE---------IAKD--------YFLPPDRTS-TAVPEPILLALAGGLAGCVMWLPPIYCLDVIKTRMQTAEPGVYRGVRDCLMKTLRAEGMPVLFRGLGAAMLRAFPMHGLVFLGYETTIDLL 214          
BLAST of mRNA_H-elongata_contig14973.3326.1 vs. uniprot
Match: A0A6H5JUA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUA4_9PHAE)

HSP 1 Score: 237 bits (605), Expect = 1.270e-74
Identity = 124/224 (55.36%), Postives = 150/224 (66.96%), Query Frame = 0
Query:    2 AGSFILRRRGADEGAHMTKLEMACAGSFAGIANSPMRQVVERVKSVMQVQRAGKYISPYSWSGACAVDLVRREGFGMGLFRGNTATAVREAVQLAIYYPTVSSVFPNPVVFVSNDLASAGHVVYFISEDRARHSGVPEPLLQMLAGGLAGCAMWLPPVYTLDVLKTRMQTAAPGVYKNMWDCAAKTWRTEGLQMFYRGLGPSFLRAFPMHGLVFVGYEATVSIL 225
            AG F+LRRR A     +T  E   AG++AG+ N+PMRQV ERVK VMQV++  K  SPYSWSGAC VDLVRREG  MGL RG  AT +RE +Q  IYYP+           ++ D        Y +  DR   + VPEP+L  LAGGLAGC MWLPP Y LDV+KTRMQTA PGVY+ + DC  KT R EG+ + +RGLG + LRAFPMHGLVF+GYE T+ +L
Sbjct:   84 AGRFLLRRREAKATDELTLPEKGIAGAWAGVMNAPMRQVFERVKGVMQVRQGKKLQSPYSWSGACVVDLVRREGVAMGLCRGMGATMLREPLQFGIYYPSYE---------IAKD--------YLLPPDRTS-TAVPEPMLLALAGGLAGCVMWLPPTYCLDVIKTRMQTAEPGVYRGVRDCLMKTLRAEGMPVLFRGLGAAMLRAFPMHGLVFLGYETTIDLL 289          
BLAST of mRNA_H-elongata_contig14973.3326.1 vs. uniprot
Match: D7FLY9_ECTSI (Carnitine/acylcarnitine carrier protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLY9_ECTSI)

HSP 1 Score: 223 bits (568), Expect = 9.650e-70
Identity = 116/205 (56.59%), Postives = 137/205 (66.83%), Query Frame = 0
Query:   22 EMACAGSFAGIANSPMRQVVERVKSVMQVQRAGKYISPYSWSGACAVDLVRREGFGMGLFRGNTATAVREAVQLAIYYPTVSSVFPNPVVFVSNDLASAGHVVYFISEDRARHSGVPEPLLQMLAGGLAGCAMWLPPVYTLDVLKTRMQTAAPGVYKNMWDCAAKTWRTEGLQMFYRGLGPSFLRAFPMHGLVFVGYEATVSILT 226
            E + AG FAG  NSP R V +RVK+VMQV+      +PYSWSGACA DLVRREG   GLFRG  +T +RE +Q AIYYP+           V+ DL +            +  S VPEP LQMLAGG+AGCA WLPPVY LDV+KTR+Q+A PGVY   WDC  KT R+EG  + +RGLG S LRAFPMHGLVFVGYE T+ +LT
Sbjct:   59 EKSAAGFFAGAMNSPFRTVFDRVKTVMQVRVGNGRAAPYSWSGACAADLVRREGVMSGLFRGIESTMLREMLQCAIYYPSYE---------VTKDLLAR--------RSTSGKSSVPEPALQMLAGGIAGCATWLPPVYCLDVIKTRLQSAEPGVYGGTWDCLRKTVRSEGTPVLFRGLGLSMLRAFPMHGLVFVGYETTIGLLT 246          
BLAST of mRNA_H-elongata_contig14973.3326.1 vs. uniprot
Match: W7TE76_9STRA (Mitochondrial carrier family n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TE76_9STRA)

HSP 1 Score: 191 bits (485), Expect = 4.790e-57
Identity = 101/220 (45.91%), Postives = 140/220 (63.64%), Query Frame = 0
Query:   10 RGADEGAHMTKLEMACAGSFAGIANSPMRQVVERVKSVMQVQRA--GKYISPYSWSGACAVDLVRREGFGMGLFRGNTATAVREAVQLAIYYPTVSSVFP--NPVVFVSNDLASAGHVVYFISEDRARHSGVPEPLLQMLAGGLAGCAMWLPPVYTLDVLKTRMQTAAPGVYKNMWDCAAKTWRTEGLQMFYRGLGPSFLRAFPMHGLVFVGYEATVSIL 225
            R  D    +T  EM  +G++AG+  SP RQ+ ER+KSVMQV++A  G    PY WSG C V LVR+EG   GLFRG  ATA+RE  Q A+YYP           ++  SN   S+ +    +    +  + +P P L +LAGG+AG   WLPP Y LDVLK+RMQ+A PGVY N+WDCA K+++ EG+ +F+RGL  + +RAFP++  +F+GYE T++ L
Sbjct:   40 RKGDNKRELTLGEMTASGAWAGLLQSPARQIFERIKSVMQVRKAAGGADKPPYRWSGECLVQLVRKEGLYNGLFRGLDATALREVPQFAVYYPLYEMNVRALQKMMAASNASGSSXNESNIVHRKPSSSTPLP-PHLLLLAGGVAGTVQWLPPFYCLDVLKSRMQSALPGVYDNVWDCAKKSYQQEGIGVFFRGLPVALIRAFPLNACIFLGYETTLAAL 258          
BLAST of mRNA_H-elongata_contig14973.3326.1 vs. uniprot
Match: A0A836C8G7_9STRA (Carnitine/acylcarnitine carrier protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8G7_9STRA)

HSP 1 Score: 189 bits (481), Expect = 9.980e-57
Identity = 102/221 (46.15%), Postives = 131/221 (59.28%), Query Frame = 0
Query:    5 FILRRRGADEGAHMTKLEMACAGSFAGIANSPMRQVVERVKSVMQVQRAGKYISPYSWSGACAVDLVRREGFGMGLFRGNTATAVREAVQLAIYYPTVSSVFPNPVVFVSNDLASAGHVVYFISEDRARHSGVPEPLLQMLAGGLAGCAMWLPPVYTLDVLKTRMQTAAPGVYKNMWDCAAKTWRTEGLQMFYRGLGPSFLRAFPMHGLVFVGYEATVSIL 225
            ++  R G    A  +  EM  AG++AG   +P RQV ERVK VMQV+      +PYSWSGAC VDLVR EG  MGLFRG  +  +RE  Q A+YYP          V     L + GH+                P+  +LAGG+AG   WLPP+Y +DVLKT++QTAAPG YK++ D A KT  TEG +  +RGLGPS +RAFP+H  +F GYE T++ L
Sbjct:   49 YLRNRDGRAANAPASVAEMTLAGAWAGAVQAPARQVFERVKGVMQVRNGAGGKAPYSWSGACLVDLVRTEGVQMGLFRGMGSQFIREVPQFALYYPAYD-------VAKRAILPADGHI---------------SPIHMLLAGGIAGTVQWLPPIYNIDVLKTKIQTAAPGTYKSIADAARKTVATEGTKGLFRGLGPSLVRAFPLHATIFAGYELTMAHL 247          
BLAST of mRNA_H-elongata_contig14973.3326.1 vs. uniprot
Match: A0A4D9D591_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D591_9STRA)

HSP 1 Score: 162 bits (411), Expect = 6.890e-47
Identity = 84/182 (46.15%), Postives = 118/182 (64.84%), Query Frame = 0
Query:   48 MQVQRAGKYI--SPYSWSGACAVDLVRREGFGMGLFRGNTATAVREAVQLAIYYPTVSSVFP--NPVVFVSNDLASAGHVVYFISEDRARHSGVPEPLLQMLAGGLAGCAMWLPPVYTLDVLKTRMQTAAPGVYKNMWDCAAKTWRTEGLQMFYRGLGPSFLRAFPMHGLVFVGYEATVSIL 225
            MQV++A   +  +PY WSG C V LVR+EG   GLFRG  ATA+RE  Q A+YYP           ++  SN   S+ H    ++   +  + +P P L +LAGG+AG   WLPP Y LDVLK+RMQ+A PGVY N+WDCA K+++ EG+ +F+RGL  + +RAFP++  +F+GYE T++ L
Sbjct:    1 MQVRKAAGGVDKAPYRWSGECLVQLVRKEGLYNGLFRGLDATALREVPQFAVYYPLYEMNVRALQKMMAASNASGSSSHEKNRVNRKPSSSTPLP-PHLLLLAGGVAGTVQWLPPFYCLDVLKSRMQSALPGVYDNVWDCAKKSYQQEGIGVFFRGLPVALIRAFPLNACIFLGYETTLAAL 181          
BLAST of mRNA_H-elongata_contig14973.3326.1 vs. uniprot
Match: K8Z8A3_NANGC (Mitochondrial carrier family n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z8A3_NANGC)

HSP 1 Score: 144 bits (363), Expect = 1.430e-38
Identity = 83/218 (38.07%), Postives = 122/218 (55.96%), Query Frame = 0
Query:   10 RGADEGAHMTKLEMACAGSFAGIANSPMRQVVERVKSVMQVQRA--GKYISPYSWSGACAVDLVRREGFGMGLFRGNTATAVREAVQLAIYYPTVSSVFPNPVVFVSNDLASAGHVVYFISEDRARHSGVPEPLLQMLAGGLAGCAMWLPPVYTLDVLKTRMQTAAPGVYKNMWDCAAKTWRTEGLQMFYRGLGPSFLRAFPMHGLVFVGYEATVSIL 225
            R  D    +T  EM  +G++AG+  SP RQ+ ER+KSVMQV++A  G    PY WSG C  ++  R                  A+Q               ++  SN   S+ +    +    +  + +P P L +LAGG+AG   WLPP Y LDVLK+RMQ+A PGVY N+WDCA K+++ EG+ +F+RGL  + +RAFP++  +F+GYE T++ L
Sbjct:   90 RKGDNKRELTLGEMTASGAWAGLLQSPARQIFERIKSVMQVRKAAGGADKPPYRWSGECLYEMNVR------------------ALQ--------------KMMAASNASGSSSNESNIVHRKPSSSTPLP-PHLLLLAGGVAGTVQWLPPFYCLDVLKSRMQSALPGVYDNVWDCAKKSYQQEGIGVFFRGLPVALIRAFPLNACIFLGYETTLAAL 274          
BLAST of mRNA_H-elongata_contig14973.3326.1 vs. uniprot
Match: A0A482SEK8_9ARCH (MC/SLC25 family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SEK8_9ARCH)

HSP 1 Score: 131 bits (329), Expect = 2.150e-34
Identity = 68/180 (37.78%), Postives = 99/180 (55.00%), Query Frame = 0
Query:   22 EMACAGSFAGIANSPMRQVVERVKSVMQVQRAGKYISPYSWSGACAVDLVRREGFGMGLFRGNTATAVREAVQLAIYYPT---VSSVFPNPVVFVSNDLASAGHVVYFISEDRARHSGVPEPLLQMLAGGLAGCAMWLPPVYTLDVLKTRMQTAAPGVYKNMWDCAAKTWRTEGLQMFYR 198
            +++ AG++ G+  SP RQ+VER+KSVMQ+       SPYSWSGACA  LV+ EG  +GLF+G ++  +RE  Q ++YYP      S++   +                   D  +        +  LAGG AG   WLPP+Y  DV+K+RMQTA  G Y  + DCA + ++  G  +F+R
Sbjct:   48 DLSMAGAYTGVLQSPARQLVERIKSVMQIHERSGGKSPYSWSGACAYHLVKTEGVRVGLFQGFSSVLLREIPQFSVYYPCYEFAKSIYTEKI------------------PDNPK-------TVNFLAGGTAGVVQWLPPIYCFDVIKSRMQTAPKGAYSGLMDCARQLYQAHGSSVFFR 202          
BLAST of mRNA_H-elongata_contig14973.3326.1 vs. uniprot
Match: A0A061S4Y8_9CHLO (Solute carrier family 25 (Mitochondrial carnitine/acylcarnitine transporter), member 20/29 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S4Y8_9CHLO)

HSP 1 Score: 120 bits (301), Expect = 5.680e-29
Identity = 77/210 (36.67%), Postives = 109/210 (51.90%), Query Frame = 0
Query:   19 TKLEMACAGSFAGIANSPMRQVVERVKSVMQVQRAGKYISPYSWSGACAVDLVRREGFGMGLFRGNTATAVREAVQLAIYYPTVSSVFPNPVVFVSNDLASAGHVVYFISEDRARHSGVPEPLLQMLAGGLAGCAMWLPPVYTLDVLKTRMQTAAPGVYKNMWDCAAKTWRTEGLQMFYRGLGPSFLRAFPMHGLVFVGYEATVSILTPL 228
            T  E   AG+ AG  +S +R   ERVK+V+Q   A  + +  +   ACA +LVRR GF  GLF G  AT  RE  Q+A+Y+ T  +V  + +        +A  VV                     AGG AG   WL   Y +DV+KTR+Q A P  Y  +  CAA + R EG  + +RG+G + +RAFP+HG +F+  EA +S++  L
Sbjct:  119 TTAEALFAGAMAGFCSSFVRGPAERVKTVLQANGAASWKNKGTL--ACARELVRRHGFVDGLFTGTGATIAREIPQMALYFLTYETVKSHSLQLFGEASGTAAIVV---------------------AGGSAGVLQWLA-TYPIDVVKTRIQAAPPRTYSGLLHCAADSVRREGPGVMWRGVGVAVVRAFPLHGTIFLTSEAALSLIARL 304          
BLAST of mRNA_H-elongata_contig14973.3326.1 vs. uniprot
Match: A0A423VQZ4_9PEZI (Uncharacterized protein n=2 Tax=Valsa TaxID=83174 RepID=A0A423VQZ4_9PEZI)

HSP 1 Score: 108 bits (271), Expect = 8.540e-25
Identity = 79/227 (34.80%), Postives = 116/227 (51.10%), Query Frame = 0
Query:    8 RRRGADEGAHMTKLEMACAGSFAGIANSPMRQVVERVKSVMQVQRAGK---YISPYSWSGACAVDLVRREGFGM--GLFRGNTATAVREAVQLAIYYPTVSSVFPNPVVFVSNDLASAGHVVYFISEDRARHSGVPEPLLQMLAGGLAGCAMWLPPVYTLDVLKTRMQTAAPGV----YKNMWDCAAKTWRTEGLQMFYRGLGPSFLRAFPMHGLVFVGYEATVSIL 225
            R RGA EGA ++  +   AG+ AG+AN+ +   +E V+  +Q Q  G    Y  P      C   LVR EG G+  G++RG+  T +REA    +++     +       +++D+A  G           R   +  PL     GGLAG A+WL   Y  DV+K++MQT   G     YK M DC A+TWR EG++ F++GLGP+ LRA P+    F   E T+  +
Sbjct:  109 RTRGAAEGAPLSYGQYFAAGAIAGVANTVLSCPIEHVRIRLQTQPHGAGRLYAGPVD----CVRKLVRAEGGGLARGVYRGSAVTVLREAQAYGVWFLAFEWL-------MNSDVARNG----------VRRDDI-SPLKVAFYGGLAGEALWLAS-YPFDVVKSKMQTDGFGKDGQRYKTMRDCFAQTWRAEGMRGFWKGLGPTLLRAMPVSAGTFAVVEMTMRAI 312          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14973.3326.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM07_ECTSI1.180e-7555.66Carnitine/acylcarnitine carrier protein n=1 Tax=Ec... [more]
A0A6H5JUA4_9PHAE1.270e-7455.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLY9_ECTSI9.650e-7056.59Carnitine/acylcarnitine carrier protein n=1 Tax=Ec... [more]
W7TE76_9STRA4.790e-5745.91Mitochondrial carrier family n=1 Tax=Nannochlorops... [more]
A0A836C8G7_9STRA9.980e-5746.15Carnitine/acylcarnitine carrier protein n=1 Tax=Tr... [more]
A0A4D9D591_9STRA6.890e-4746.15Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
K8Z8A3_NANGC1.430e-3838.07Mitochondrial carrier family n=1 Tax=Nannochlorops... [more]
A0A482SEK8_9ARCH2.150e-3437.78MC/SLC25 family protein n=1 Tax=archaeon TaxID=190... [more]
A0A061S4Y8_9CHLO5.680e-2936.67Solute carrier family 25 (Mitochondrial carnitine/... [more]
A0A423VQZ4_9PEZI8.540e-2534.80Uncharacterized protein n=2 Tax=Valsa TaxID=83174 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018108Mitochondrial substrate/solute carrierPFAMPF00153Mito_carrcoord: 23..101
e-value: 5.2E-8
score: 32.7
coord: 141..225
e-value: 3.0E-18
score: 65.5
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 138..224
score: 20.475
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 18..108
score: 8.29
IPR023395Mitochondrial carrier domain superfamilyGENE3D1.50.40.10coord: 4..227
e-value: 1.3E-37
score: 131.1
IPR023395Mitochondrial carrier domain superfamilySUPERFAMILY103506Mitochondrial carriercoord: 7..219
NoneNo IPR availablePANTHERPTHR45624FAMILY NOT NAMEDcoord: 20..226
NoneNo IPR availablePANTHERPTHR45624:SF10MITOCHONDRIAL ARGININE TRANSPORTER BAC2coord: 20..226

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14973contigH-elongata_contig14973:4235..6885 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14973.3326.1mRNA_H-elongata_contig14973.3326.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig14973 3554..6967 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig14973.3326.1 ID=prot_H-elongata_contig14973.3326.1|Name=mRNA_H-elongata_contig14973.3326.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=230bp
MAGSFILRRRGADEGAHMTKLEMACAGSFAGIANSPMRQVVERVKSVMQV
QRAGKYISPYSWSGACAVDLVRREGFGMGLFRGNTATAVREAVQLAIYYP
TVSSVFPNPVVFVSNDLASAGHVVYFISEDRARHSGVPEPLLQMLAGGLA
GCAMWLPPVYTLDVLKTRMQTAAPGVYKNMWDCAAKTWRTEGLQMFYRGL
GPSFLRAFPMHGLVFVGYEATVSILTPLC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018108Mitochondrial_sb/sol_carrier
IPR023395Mt_carrier_dom_sf