prot_H-elongata_contig147411.3215.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig147411.3215.1
Unique Nameprot_H-elongata_contig147411.3215.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length112
Homology
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BLAST of mRNA_H-elongata_contig147411.3215.1 vs. uniprot
Match: A0A6H5KGQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGQ6_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 1.150e-7
Identity = 24/41 (58.54%), Postives = 32/41 (78.05%), Query Frame = 0 
Query:   14 MQEIAVPSFIKLLEQAIDESNGAFRMPHKWKDQLHYSTLGT 54
            MQEIAV  FIKL+E A+   +G  +MPHKWKD ++Y+TLG+
Sbjct:    1 MQEIAVSGFIKLIEHAMSTMDGPLQMPHKWKDMVYYTTLGS 41
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig147411.3215.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KGQ6_9PHAE1.150e-758.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig147411contigH-elongata_contig147411:931..1266 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig147411.3215.1mRNA_H-elongata_contig147411.3215.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig147411 715..1277 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig147411.3215.1 ID=prot_H-elongata_contig147411.3215.1|Name=mRNA_H-elongata_contig147411.3215.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=112bp
MSKADRDRRASQFMQEIAVPSFIKLLEQAIDESNGAFRMPHKWKDQLHYS
TLGTGGQSRRSWHTGTYHTCILFPSALYTFEPEDSWSPGLSVPLMVVRRR
GCWEGWNEFKV*
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