prot_H-elongata_contig145356.3106.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig145356.3106.1
Unique Nameprot_H-elongata_contig145356.3106.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length45
Homology
BLAST of mRNA_H-elongata_contig145356.3106.1 vs. uniprot
Match: A0A6H5KKY0_9PHAE (Anaphase-promoting complex subunit 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKY0_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 5.660e-19
Identity = 38/45 (84.44%), Postives = 44/45 (97.78%), Query Frame = 0
Query:    1 QAALGAHSDVPKAHFLRLMNCMHHRDLQGSIDSLHRFFDYAVRRG 45
            QAALG+ SDVPKAHFLRL+NCMHHR+L+GS+DSLHR+FDYAVRRG
Sbjct:  186 QAALGSRSDVPKAHFLRLVNCMHHRELEGSLDSLHRYFDYAVRRG 230          
BLAST of mRNA_H-elongata_contig145356.3106.1 vs. uniprot
Match: D7FTQ0_ECTSI (Anaphase-promoting complex subunit 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ0_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 5.670e-19
Identity = 38/45 (84.44%), Postives = 44/45 (97.78%), Query Frame = 0
Query:    1 QAALGAHSDVPKAHFLRLMNCMHHRDLQGSIDSLHRFFDYAVRRG 45
            QAALG+ SDVPKAHFLRL+NCMHHR+L+GS+DSLHR+FDYAVRRG
Sbjct:  225 QAALGSRSDVPKAHFLRLVNCMHHRELEGSLDSLHRYFDYAVRRG 269          
BLAST of mRNA_H-elongata_contig145356.3106.1 vs. uniprot
Match: A0A7S2U8I9_9STRA (Anaphase-promoting complex subunit 5 (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U8I9_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.950e-9
Identity = 23/39 (58.97%), Postives = 33/39 (84.62%), Query Frame = 0
Query:    4 LGAHSDVPKAHFLRLMNCMHHRDLQGSIDSLHRFFDYAV 42
            LG++ ++P AHFLR +NCMHH +  G++DSLHR+FDYA+
Sbjct:  218 LGSYPELPAAHFLRFLNCMHHGERVGALDSLHRYFDYAM 256          
BLAST of mRNA_H-elongata_contig145356.3106.1 vs. uniprot
Match: A0A2R5GT38_9STRA (Anaphase-promoting complex subunit 5 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GT38_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.560e-8
Identity = 21/37 (56.76%), Postives = 31/37 (83.78%), Query Frame = 0
Query:    9 DVPKAHFLRLMNCMHHRDLQGSIDSLHRFFDYAVRRG 45
            D+P+AHF+R +NC+ HR+ QG++DSLH +FDY +R G
Sbjct:  327 DLPRAHFVRYLNCLLHREYQGAVDSLHTYFDYCMRSG 363          
BLAST of mRNA_H-elongata_contig145356.3106.1 vs. uniprot
Match: W7U440_9STRA (Anaphase-promoting complex subunit 5 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U440_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 2.130e-8
Identity = 22/45 (48.89%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    1 QAALGAHSDVPKAHFLRLMNCMHHRDLQGSIDSLHRFFDYAVRRG 45
            +A L  H ++P+  FLR +N   HR++ G++D+LHR+FDYA+RRG
Sbjct:  233 EALLQQHPELPRGQFLRYLNSSRHREVAGALDALHRYFDYAIRRG 277          
BLAST of mRNA_H-elongata_contig145356.3106.1 vs. uniprot
Match: F0Y6Q2_AURAN (Anaphase-promoting complex subunit 5 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6Q2_AURAN)

HSP 1 Score: 55.8 bits (133), Expect = 7.450e-8
Identity = 21/37 (56.76%), Postives = 32/37 (86.49%), Query Frame = 0
Query:    9 DVPKAHFLRLMNCMHHRDLQGSIDSLHRFFDYAVRRG 45
            ++P+A FLR ++C+HHR+L G++D+LHR+FDYA  RG
Sbjct:  282 ELPRASFLRYLSCVHHRELLGALDALHRYFDYARARG 318          
BLAST of mRNA_H-elongata_contig145356.3106.1 vs. uniprot
Match: A0A7S2D4P3_9STRA (Anaphase-promoting complex subunit 5 (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D4P3_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 1.390e-7
Identity = 21/36 (58.33%), Postives = 30/36 (83.33%), Query Frame = 0
Query:   10 VPKAHFLRLMNCMHHRDLQGSIDSLHRFFDYAVRRG 45
            +PKA++LR +NC HHRD  G++D+LHR+F+YA R G
Sbjct:   28 LPKAYWLRCLNCAHHRDHHGAVDALHRYFNYAARWG 63          
BLAST of mRNA_H-elongata_contig145356.3106.1 vs. uniprot
Match: A0A388K336_CHABU (Anaphase-promoting complex subunit 5 n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K336_CHABU)

HSP 1 Score: 54.7 bits (130), Expect = 1.900e-7
Identity = 20/34 (58.82%), Postives = 28/34 (82.35%), Query Frame = 0
Query:    9 DVPKAHFLRLMNCMHHRDLQGSIDSLHRFFDYAV 42
            ++PK H+LR +NC+HH D  G++DSLHR+FDY V
Sbjct:  393 EMPKIHYLRYLNCLHHGDYPGAMDSLHRYFDYRV 426          
BLAST of mRNA_H-elongata_contig145356.3106.1 vs. uniprot
Match: A0A7S4J3E1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J3E1_9STRA)

HSP 1 Score: 48.1 bits (113), Expect = 1.560e-5
Identity = 18/42 (42.86%), Postives = 30/42 (71.43%), Query Frame = 0
Query:    1 QAALGAHSDVPKAHFLRLMNCMHHRDLQGSIDSLHRFFDYAV 42
            ++ L  + ++P AHFLR + C+   +  G+++SLHR+FDYAV
Sbjct:   72 RSVLSLYPELPSAHFLRFLRCLEEGERVGALESLHRYFDYAV 113          
BLAST of mRNA_H-elongata_contig145356.3106.1 vs. uniprot
Match: A0A7S2WV16_9STRA (Anaphase-promoting complex subunit 5 (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WV16_9STRA)

HSP 1 Score: 45.8 bits (107), Expect = 7.270e-5
Identity = 17/31 (54.84%), Postives = 26/31 (83.87%), Query Frame = 0
Query:   15 FLRLMNCMHHRDLQGSIDSLHRFFDYAVRRG 45
            +LR +NC++HRD QG++  LH++FDYA+R G
Sbjct:    1 WLRSLNCLYHRDEQGALAGLHKYFDYAIRIG 31          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig145356.3106.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5KKY0_9PHAE5.660e-1984.44Anaphase-promoting complex subunit 5 n=1 Tax=Ectoc... [more]
D7FTQ0_ECTSI5.670e-1984.44Anaphase-promoting complex subunit 5 n=1 Tax=Ectoc... [more]
A0A7S2U8I9_9STRA1.950e-958.97Anaphase-promoting complex subunit 5 (Fragment) n=... [more]
A0A2R5GT38_9STRA1.560e-856.76Anaphase-promoting complex subunit 5 n=1 Tax=Honda... [more]
W7U440_9STRA2.130e-848.89Anaphase-promoting complex subunit 5 n=2 Tax=Monod... [more]
F0Y6Q2_AURAN7.450e-856.76Anaphase-promoting complex subunit 5 n=1 Tax=Aureo... [more]
A0A7S2D4P3_9STRA1.390e-758.33Anaphase-promoting complex subunit 5 (Fragment) n=... [more]
A0A388K336_CHABU1.900e-758.82Anaphase-promoting complex subunit 5 n=1 Tax=Chara... [more]
A0A7S4J3E1_9STRA1.560e-542.86Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A7S2WV16_9STRA7.270e-554.84Anaphase-promoting complex subunit 5 (Fragment) n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026000Anaphase-promoting complex subunit 5 domainPFAMPF12862ANAPC5coord: 14..43
e-value: 1.3E-6
score: 28.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig145356contigH-elongata_contig145356:1469..1603 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig145356.3106.1mRNA_H-elongata_contig145356.3106.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig145356 1469..1603 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig145356.3106.1 ID=prot_H-elongata_contig145356.3106.1|Name=mRNA_H-elongata_contig145356.3106.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=45bp
QAALGAHSDVPKAHFLRLMNCMHHRDLQGSIDSLHRFFDYAVRRG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026000Apc5_dom