prot_H-elongata_contig100241.31.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig100241.31.1
Unique Name	prot_H-elongata_contig100241.31.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	164

Homology

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BLAST of mRNA_H-elongata_contig100241.31.1 vs. uniprot
Match: G1KHR5_ANOCA (Dopa decarboxylase n=2 Tax=Iguania TaxID=8511 RepID=G1KHR5_ANOCA)

HSP 1 Score: 193 bits (491), Expect = 1.090e-56
Identity = 87/154 (56.49%), Postives = 113/154 (73.38%), Query Frame = 0

Query:    1 LQCKYAGSAAVCPENRWILDGVEHADSFTFNLHKWLLATFDCNAMWVKRSAFLVDALSITPEYLKSKEYEQGQVSDFRNWQVPLSRKFRSLKIWFIMRAFGLTKIRNHIRHGIQLAEELKELVMQDDRFEIAAPPRFGLICFRLKGSNAATEEL 154
            +   YAGS+ +CPE R++LDGVE ADSF FN HKWLL  FDC+AMWVK+ + L  A  I P YLK    E G ++D+R+WQ+PL R+FRSLK+WF++R +G+  ++ +IR  I+LA E K+LV+QDDRFEI A    GL+CFRLKGSN   EEL
Sbjct:  270 IDAAYAGSSFICPEFRYLLDGVEFADSFNFNAHKWLLVNFDCSAMWVKKRSDLTRAFKIDPIYLKHGYEESGHITDYRHWQIPLGRRFRSLKLWFVLRMYGVKGLQEYIRKHIKLAHEFKDLVLQDDRFEICADVIMGLVCFRLKGSNKLNEEL 423

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BLAST of mRNA_H-elongata_contig100241.31.1 vs. uniprot
Match: A0A6J0UMC1_9SAUR (aromatic-L-amino-acid decarboxylase n=1 Tax=Pogona vitticeps TaxID=103695 RepID=A0A6J0UMC1_9SAUR)

HSP 1 Score: 191 bits (485), Expect = 3.010e-56
Identity = 85/154 (55.19%), Postives = 111/154 (72.08%), Query Frame = 0

Query:    1 LQCKYAGSAAVCPENRWILDGVEHADSFTFNLHKWLLATFDCNAMWVKRSAFLVDALSITPEYLKSKEYEQGQVSDFRNWQVPLSRKFRSLKIWFIMRAFGLTKIRNHIRHGIQLAEELKELVMQDDRFEIAAPPRFGLICFRLKGSNAATEEL 154
            +   YAGSA +CPE R++L+GVE ADSF FN HKWLL  FDC+ MWVK+ + L+ A  I P YLK    E G ++D+R+WQ+PL R+FRSLK+WF+ R +G+  ++ HIR  ++LA E K+LV+QDDRFEI A    GL+CFRLKGSN   E L
Sbjct:  222 IDAAYAGSAFICPEFRYLLNGVEFADSFNFNPHKWLLVNFDCSVMWVKKRSDLICAFKIDPVYLKHDHQESGLITDYRHWQIPLGRRFRSLKLWFVFRMYGVKGLQEHIRKHVKLAHEFKDLVLQDDRFEICADVILGLVCFRLKGSNELNEAL 375

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BLAST of mRNA_H-elongata_contig100241.31.1 vs. uniprot
Match: A0A8D2JFL1_VARKO (Dopa decarboxylase n=7 Tax=Varanus komodoensis TaxID=61221 RepID=A0A8D2JFL1_VARKO)

HSP 1 Score: 191 bits (484), Expect = 1.220e-55
Identity = 86/158 (54.43%), Postives = 112/158 (70.89%), Query Frame = 0

Query:    1 LQCKYAGSAAVCPENRWILDGVEHADSFTFNLHKWLLATFDCNAMWVKRSAFLVDALSITPEYLKSKEYEQGQVSDFRNWQVPLSRKFRSLKIWFIMRAFGLTKIRNHIRHGIQLAEELKELVMQDDRFEIAAPPRFGLICFRLKGSNAATEELRRVT 158
            +   YAGS+ +CPE R++L+GVE ADSF FN HKWLL  FDC+AMWVK  + L     I P YLK +  E G ++D+R+WQ+PL R+FRSLK+WF+ R +G+  ++ HIR  ++LA E KELV+QDDRFEI A    GL+CFRLKGSN   E L + T
Sbjct:  270 IDAAYAGSSFICPEFRYLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKNRSDLTSTFKIDPLYLKHEHEESGLITDYRHWQIPLGRRFRSLKMWFVFRMYGVKGLQEHIRKHVKLAHEFKELVLQDDRFEICAEVILGLVCFRLKGSNELNEALLQST 427

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BLAST of mRNA_H-elongata_contig100241.31.1 vs. uniprot
Match: A0A852JEU3_9PICI (DDC decarboxylase (Fragment) n=1 Tax=Tricholaema leucomelas TaxID=240729 RepID=A0A852JEU3_9PICI)

HSP 1 Score: 184 bits (468), Expect = 3.210e-55
Identity = 83/154 (53.90%), Postives = 109/154 (70.78%), Query Frame = 0

Query:    1 LQCKYAGSAAVCPENRWILDGVEHADSFTFNLHKWLLATFDCNAMWVKRSAFLVDALSITPEYLKSKEYEQGQVSDFRNWQVPLSRKFRSLKIWFIMRAFGLTKIRNHIRHGIQLAEELKELVMQDDRFEIAAPPRFGLICFRLKGSNAATEEL 154
            +   YAGSA +CPE R  L+GVE ADSF FN HKWLL  FDC+AMWVK+   L+ A  + P YL+    E G V+D+R+WQ+PL R+FRSLK+WF++R +G+T ++ HIR  ++LA   + LV+QD+RFEI A    GL+CFRLKGSN   E L
Sbjct:   81 IDAAYAGSAFICPEFRQFLNGVEFADSFNFNPHKWLLVNFDCSAMWVKKRLDLISAFKLEPLYLQHHHQESGLVTDYRHWQIPLGRRFRSLKLWFVLRMYGVTGLQQHIRKHVKLAHLFEHLVLQDERFEICAEVVLGLVCFRLKGSNKLNEAL 234

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BLAST of mRNA_H-elongata_contig100241.31.1 vs. uniprot
Match: A0A7L0ZJU5_9PASS (DDC decarboxylase (Fragment) n=5 Tax=Neognathae TaxID=8825 RepID=A0A7L0ZJU5_9PASS)

HSP 1 Score: 184 bits (467), Expect = 4.420e-55
Identity = 81/154 (52.60%), Postives = 111/154 (72.08%), Query Frame = 0

Query:    1 LQCKYAGSAAVCPENRWILDGVEHADSFTFNLHKWLLATFDCNAMWVKRSAFLVDALSITPEYLKSKEYEQGQVSDFRNWQVPLSRKFRSLKIWFIMRAFGLTKIRNHIRHGIQLAEELKELVMQDDRFEIAAPPRFGLICFRLKGSNAATEEL 154
            +   YAGSA +CPE R +L+GVE ADSF FN HKWLL  FDC+AMWVK+ + L+ A  + P YL+    E G V+D+R+WQ+PL R+FRSLK+WF++R +G+  ++ HIR  ++L+ + + LV+QD+RFEI A    GL+CFRLKGSN   E L
Sbjct:   80 IDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKKRSDLIGAFKLEPLYLQHHHQESGLVTDYRHWQIPLGRRFRSLKLWFVLRMYGVKGLQEHIRKHVRLSHQFEHLVLQDERFEICAEVVLGLVCFRLKGSNKLNEAL 233

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BLAST of mRNA_H-elongata_contig100241.31.1 vs. uniprot
Match: A0A093C790_9AVES (Aromatic-L-amino-acid decarboxylase (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A093C790_9AVES)

HSP 1 Score: 184 bits (466), Expect = 6.250e-55
Identity = 81/154 (52.60%), Postives = 111/154 (72.08%), Query Frame = 0

Query:    1 LQCKYAGSAAVCPENRWILDGVEHADSFTFNLHKWLLATFDCNAMWVKRSAFLVDALSITPEYLKSKEYEQGQVSDFRNWQVPLSRKFRSLKIWFIMRAFGLTKIRNHIRHGIQLAEELKELVMQDDRFEIAAPPRFGLICFRLKGSNAATEEL 154
            +   YAGSA +CPE R +L+GVE ADSF FN HKWLL  FDC+AMWVK+ + L+ A  + P YL+    E G V+D+R+WQ+PL R+FRSLK+WF++R +G+T ++ HIR  ++L+ + + LV QD+RFEI A    GL+CFRLKGSN   + L
Sbjct:   80 IDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKKRSDLIGAFKLEPLYLQHHHQESGLVTDYRHWQIPLGRRFRSLKLWFVLRMYGVTGLQEHIRKHVRLSHQFEHLVRQDERFEICAEVVLGLVCFRLKGSNELNKAL 233

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BLAST of mRNA_H-elongata_contig100241.31.1 vs. uniprot
Match: A0A7L1NWF1_RHICY (DDC decarboxylase (Fragment) n=1 Tax=Rhinopomastus cyanomelas TaxID=113115 RepID=A0A7L1NWF1_RHICY)

HSP 1 Score: 182 bits (461), Expect = 8.900e-55
Identity = 78/154 (50.65%), Postives = 112/154 (72.73%), Query Frame = 0

Query:    1 LQCKYAGSAAVCPENRWILDGVEHADSFTFNLHKWLLATFDCNAMWVKRSAFLVDALSITPEYLKSKEYEQGQVSDFRNWQVPLSRKFRSLKIWFIMRAFGLTKIRNHIRHGIQLAEELKELVMQDDRFEIAAPPRFGLICFRLKGSNAATEEL 154
            +   YAGSA +CPE R +L+GVE ADSF FN HKWLL  FDC+AMWVK  + +++A  + P YL+    E G ++D+R+WQ+PL R+FRSLK+WF++R +G+  ++ HIR  ++L+ + + LV+QD+RFEI+A    GL+CFRLKGSN   + L
Sbjct:   32 IDAAYAGSAFICPEFRHLLNGVEFADSFDFNPHKWLLVNFDCSAMWVKNRSDIINAFKLEPVYLQHDHQESGLITDYRHWQIPLGRRFRSLKLWFVLRMYGVRGLQEHIRKHVRLSHQFEHLVLQDERFEISAEVILGLVCFRLKGSNELNKAL 185

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BLAST of mRNA_H-elongata_contig100241.31.1 vs. uniprot
Match: A0A5Q4EML6_9BACT (Aspartate aminotransferase family protein n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A5Q4EML6_9BACT)

HSP 1 Score: 187 bits (476), Expect = 1.790e-54
Identity = 85/156 (54.49%), Postives = 110/156 (70.51%), Query Frame = 0

Query:    1 LQCKYAGSAAVCPENRWILDGVEHADSFTFNLHKWLLATFDCNAMWVKRSAFLVDALSITPEYLKSKEYEQGQVSDFRNWQVPLSRKFRSLKIWFIMRAFGLTKIRNHIRHGIQLAEELKELVMQDDRFEIAAPPRFGLICFRLKGSNAATEELRR 156
            +   YAG+  VCPE RWI+DGVEHADSF FN HKWLL  FDC+A WV   A L+ ALSITPEYL++   + G V D+R+WQ+PL R+FRSLK+WF++R +G+  +R  IRH + LAE  + LV  D+RFEI AP    L+CFRL+  +  + EL R
Sbjct:  265 VDAAYAGAMCVCPEYRWIIDGVEHADSFVFNPHKWLLTNFDCSAFWVADRADLLGALSITPEYLRNAASDAGAVIDYRDWQIPLGRRFRSLKLWFVIRHYGVEGLREFIRHHLGLAELFESLVRSDERFEICAPRTTSLVCFRLRAGDEPSRELLR 420

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BLAST of mRNA_H-elongata_contig100241.31.1 vs. uniprot
Match: UPI000C756523 (aromatic-L-amino-acid decarboxylase-like isoform X1 n=2 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C756523)

HSP 1 Score: 187 bits (475), Expect = 2.220e-54
Identity = 81/156 (51.92%), Postives = 112/156 (71.79%), Query Frame = 0

Query:    1 LQCKYAGSAAVCPENRWILDGVEHADSFTFNLHKWLLATFDCNAMWVKRSAFLVDALSITPEYLKSKEYEQGQVSDFRNWQVPLSRKFRSLKIWFIMRAFGLTKIRNHIRHGIQLAEELKELVMQDDRFEIAAPPRFGLICFRLKGSNAATEELRR 156
            +   YAGS+ +CPE R +LDGVE A+SF FN HKW+L  FDC+AMW+K S  +VDA ++ P YL+ +   QG++ D+R+W +PL R+FRSLKIWF+MR +GL  +R HIR  ++LA +  E+V  D RFE+  PPR GL+CFR+K SN   E+L +
Sbjct:  264 VDAAYAGSSFICPEFRPLLDGVEFAESFNFNPHKWMLVNFDCSAMWIKDSRKIVDAFNVDPLYLQHRH--QGEIPDYRHWHIPLGRRFRSLKIWFVMRIYGLEGLRKHIREQVELANQFAEIVQTDPRFELPTPPRMGLVCFRVKASNVVNEKLNK 417

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BLAST of mRNA_H-elongata_contig100241.31.1 vs. uniprot
Match: UPI0020263C1D (aromatic-L-amino-acid decarboxylase n=1 Tax=Sphaerodactylus townsendi TaxID=933632 RepID=UPI0020263C1D)

HSP 1 Score: 187 bits (474), Expect = 3.680e-54
Identity = 84/154 (54.55%), Postives = 108/154 (70.13%), Query Frame = 0

Query:    1 LQCKYAGSAAVCPENRWILDGVEHADSFTFNLHKWLLATFDCNAMWVKRSAFLVDALSITPEYLKSKEYEQGQVSDFRNWQVPLSRKFRSLKIWFIMRAFGLTKIRNHIRHGIQLAEELKELVMQDDRFEIAAPPRFGLICFRLKGSNAATEEL 154
            +   YAGS+ VCPE R++L+GVE ADSF FN HKWLL  FDC+ MWVK+   L  A  I P YLK    E G ++D+R+WQ+PL R+FRSLK+WF+ R +G+  ++ HIR  ++LA E K+LV+QDDRFEI A    GL+CFRLKG N   E L
Sbjct:  270 IDAAYAGSSFVCPEFRYLLNGVEFADSFNFNPHKWLLVNFDCSTMWVKKRTDLTCAFKIDPVYLKHDHQESGLITDYRHWQIPLGRRFRSLKMWFVFRMYGVKGLQEHIRKHVKLAHEFKDLVLQDDRFEICADVVLGLVCFRLKGKNELNEAL 423

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig100241.31.1 vs. uniprot

BLAST of mRNA_H-elongata_contig100241.31.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
G1KHR5_ANOCA	1.090e-56	56.49	Dopa decarboxylase n=2 Tax=Iguania TaxID=8511 RepI...	[more]
A0A6J0UMC1_9SAUR	3.010e-56	55.19	aromatic-L-amino-acid decarboxylase n=1 Tax=Pogona...	[more]
A0A8D2JFL1_VARKO	1.220e-55	54.43	Dopa decarboxylase n=7 Tax=Varanus komodoensis Tax...	[more]
A0A852JEU3_9PICI	3.210e-55	53.90	DDC decarboxylase (Fragment) n=1 Tax=Tricholaema l...	[more]
A0A7L0ZJU5_9PASS	4.420e-55	52.60	DDC decarboxylase (Fragment) n=5 Tax=Neognathae Ta...	[more]
A0A093C790_9AVES	6.250e-55	52.60	Aromatic-L-amino-acid decarboxylase (Fragment) n=2...	[more]
A0A7L1NWF1_RHICY	8.900e-55	50.65	DDC decarboxylase (Fragment) n=1 Tax=Rhinopomastus...	[more]
A0A5Q4EML6_9BACT	1.790e-54	54.49	Aspartate aminotransferase family protein n=1 Tax=...	[more]
UPI000C756523	2.220e-54	51.92	aromatic-L-amino-acid decarboxylase-like isoform X...	[more]
UPI0020263C1D	3.680e-54	54.55	aromatic-L-amino-acid decarboxylase n=1 Tax=Sphaer...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 162..163
None	No IPR available	PANTHER	PTHR11999	GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE	coord: 5..155
IPR010977	Aromatic-L-amino-acid decarboxylase	PRINTS	PR00800	YHDCRBOXLASE	coord: 83..98 score: 63.57 coord: 126..145 score: 58.0
IPR015421	Pyridoxal phosphate-dependent transferase, major domain	GENE3D	3.40.640.10		coord: 2..110 e-value: 4.2E-37 score: 129.6
IPR015422	Pyridoxal phosphate-dependent transferase domain 1	GENE3D	3.90.1150.10		coord: 111..158 e-value: 2.4E-13 score: 51.9
IPR002129	Pyridoxal phosphate-dependent decarboxylase	PFAM	PF00282	Pyridoxal_deC	coord: 5..145 e-value: 1.3E-43 score: 149.2
IPR021115	Pyridoxal-phosphate binding site	PROSITE	PS00392	DDC_GAD_HDC_YDC	coord: 27..48
IPR015424	Pyridoxal phosphate-dependent transferase	SUPERFAMILY	53383	PLP-dependent transferases	coord: 5..156

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig100241	contig	H-elongata_contig100241:250..2220 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig100241.31.1	mRNA_H-elongata_contig100241.31.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig100241 250..2220 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig100241.31.1 ID=prot_H-elongata_contig100241.31.1|Name=mRNA_H-elongata_contig100241.31.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=164bp
LQCKYAGSAAVCPENRWILDGVEHADSFTFNLHKWLLATFDCNAMWVKRS
AFLVDALSITPEYLKSKEYEQGQVSDFRNWQVPLSRKFRSLKIWFIMRAF
GLTKIRNHIRHGIQLAEELKELVMQDDRFEIAAPPRFGLICFRLKGSNAA
TEELRRVTLPVAE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR010977	Aromatic_deC
IPR015421	PyrdxlP-dep_Trfase_major
IPR015422	PyrdxlP-dep_Trfase_dom1
IPR002129	PyrdxlP-dep_de-COase
IPR021115	Pyridoxal-P_BS
IPR015424	PyrdxlP-dep_Trfase