mRNA_H-elongata_contig14525.3096.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig14525.3096.1 vs. uniprot
Match: D7FRF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRF7_ECTSI) HSP 1 Score: 424 bits (1090), Expect = 6.890e-145 Identity = 226/343 (65.89%), Postives = 260/343 (75.80%), Query Frame = 1
Query: 1 ENGPSAYELARLEKIKKNAMVMASLGLIGAAGGMRATKKADLGKRVRARGLQPRQQKAYPARTRESARVRGKTPEGLPMEDPEEAFNRNRLREGSTGAGVQAAAGAGLTIR-PRLVGDVSMDASNVSAHETQRLRKIMGGLESRYGSDEDAQEGELAEPDEILTRLRGLKVEETGVSKVVRERAYSLAWHPSRTKLLIAAGDKVGNIGLWRIDGEESEKEGGGGVFHFKPHTGSVARLTFDPLDGNKLVSTSYDGTARRMDVEKGAFDQASAALVFANDVRNDTYLTDGHLMAEERLLLLSDGVGDVTAVDLRTSKQVWKREAHEKKANTVHTHPTSRHLFVT 1026
ENGPSAYEL RL K+K+NAM+MASLGL GA MR +D +R +ARGL PR K YPAR+RESARVRGKTPEGLPMEDPEEAFNR R +G G AA R PR+ GDVSM+A+N + T RLR++MGGL RY D + ++ ELAEPD+ L RL LKVEETGV KVVRERAYS WHPS KLL+A GDKVGN+GLW +D E +++ GVF FKPHTG+V R+TFDPLDGNKL+STSYDGT RRMDVEKGAF+Q VF N D + TDGHL+AE+RLLLLSDGVGD+TAVDLRT+ QVWKREAHEKK NTVH HP +RHLFVT
Sbjct: 67 ENGPSAYELQRLAKMKENAMMMASLGLGGAKDNMRKAVNSDAAQRAKARGLGPRPNKVYPARSRESARVRGKTPEGLPMEDPEEAFNRRR--QGFGAQGTAAAXXXXXXPRSPRIEGDVSMEATNSTLDGTVRLRQMMGGLVGRYDRDGNEEDYELAEPDDALKRLSCLKVEETGVCKVVRERAYSTTWHPSGDKLLLAVGDKVGNVGLWTVD-ETDDRDAAHGVFQFKPHTGAVPRMTFDPLDGNKLLSTSYDGTVRRMDVEKGAFEQ-----VFGNKAGEDAFFTDGHLVAEDRLLLLSDGVGDITAVDLRTTTQVWKREAHEKKVNTVHVHPGNRHLFVT 401
BLAST of mRNA_H-elongata_contig14525.3096.1 vs. uniprot
Match: A0A6H5K3Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Y8_9PHAE) HSP 1 Score: 222 bits (565), Expect = 9.930e-67 Identity = 141/282 (50.00%), Postives = 172/282 (60.99%), Query Frame = 1
Query: 1 ENGPSAYELARLEKIKKNAMVMASLGLIGAAGGMRATKKADLGKRVRARGLQPRQQKAYPARTRESARVRGKTPEGLPMEDPEEAFNRNRLREGSTGAGVQAAAGAGLTIR----PRLVGDVSMDASNVSAHETQRLRKIMGGL----------ESRYGSDEDAQEGELAEPDEILTRLRGLKVEETGVSKVVRERAYSLAWHPSRTKLLIAAGDKVGNIGLWRIDGEESEKEGGGGVFHFKPHTGSVARLTFDPLDGNKLVSTSYDGTARRMDVEKGAFDQ 804
ENGPSAYEL RL K+K+NAM+MASLGL GA MR +D +R +ARGL PR K YPAR+RESARVRGKTPEGLPMEDPEEAFNR R +G G G AAA PR+ GDVSM+ +N + T RLR+ + E S A+ + P L+R + +E GV+ PS+ D+VGN+GLW +D E + + GVF FKPHTG+V R+TFDPLDGNK++STSYDGT RRMDVEKGAF+Q
Sbjct: 67 ENGPSAYELQRLAKMKENAMMMASLGLGGAKDSMRKAVNSDAAQRAKARGLGPRPNKVYPARSRESARVRGKTPEGLPMEDPEEAFNRRR--QGFDGQGTTAAAXXXXXXXSPRSPRIEGDVSMEETNGTLDGTVRLRQAGHCIACFLLTPKARERAVTSASAARCSKCTMPVCALSRRKS-DADECGVN-------------PSKA-------DEVGNVGLWTVD-ETDDNDAAHGVFQFKPHTGAVPRMTFDPLDGNKMLSTSYDGTVRRMDVEKGAFEQ 324
BLAST of mRNA_H-elongata_contig14525.3096.1 vs. uniprot
Match: A0A7M7N7U2_STRPU (WD repeat-containing protein 76 n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7N7U2_STRPU) HSP 1 Score: 140 bits (352), Expect = 1.030e-33 Identity = 124/353 (35.13%), Postives = 177/353 (50.14%), Query Frame = 1
Query: 7 GPSAYELARLEKIKKNAMVMASLGLIGAAGGMRA-TKKADLGKRVRARGLQPRQQKAYPARTR-ESARVRGKTPEGLPMEDPEEAFNRNRLREGSTGAGVQAAAGAGLTIRPRLVGD-VSMDASNVSAHE-TQRLRKIMGGLESRYGSDEDAQEGELAEPDEILTRLRGLKVEETGVSKVVRERAYSLAWHPSRTKLLIAAGDKVGNIGLWRIDGEESEKEGGGGVFHFKPHTGSVARLTFDPLDGNKLVSTSYDGTARRMDVEKGAFDQASAA----LVFANDVRNDTYLTDGHLMAEERLLLLSDGVGDVTAVDLRTSK---QVWKREAHEKKANTVHTHPTSRHLFVTVS 1032
G S YE RLE I KNA ASL + A A T +A KR + RGL+ +++++ P R S R++ K+P+G + PE RE + V + + R RL D V MDA+NV E T + GL + ++ + + + ++ ++L+ +K++ ++KVV +R +S+A HPS K ++ AGDK G IGLW ++ EG GVF F PHT V L F P D NKL S SYDGT R D K FD+ A +++ N D DG + L+ +D G+V VD R+ K V+ H + A TV HPT H FVT S
Sbjct: 43 GLSEYEKRRLENISKNADFFASLDIFKAKENFLALTPQAQKPKR-QTRGLKSQKRESAPVERRPRSLRIQNKSPDGAEL--PE------NFREPTYTPYV-----SDVRSRERLPSDPVKMDATNVKKEEKTDAGTDFVEGLAALARGEKTSVAADDKDLNKFASQLQKMKMKPRYMAKVVPDRIFSVAVHPSVDKTVVVAGDKWGKIGLWDVN----STEGDDGVFLFAPHTRPVNCLRFSPSDPNKLFSVSYDGTVRCGDFAKAVFDEVYVADEDEVIWTNFF--DFMSADGSSL----LVTQNDRTGNVVVVDTRSRKGGENVYN--VHSRNAKTVSVHPTMPHYFVTAS 369
BLAST of mRNA_H-elongata_contig14525.3096.1 vs. uniprot
Match: A0A7M7PCY4_STRPU (WD repeat-containing protein 76 n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7PCY4_STRPU) HSP 1 Score: 137 bits (344), Expect = 1.390e-32 Identity = 123/353 (34.84%), Postives = 177/353 (50.14%), Query Frame = 1
Query: 7 GPSAYELARLEKIKKNAMVMASLGLIGAAGGMRA-TKKADLGKRVRARGLQPRQQKAYPARTR-ESARVRGKTPEGLPMEDPEEAFNRNRLREGSTGAGVQAAAGAGLTIRPRLVGD-VSMDASNVSAHE-TQRLRKIMGGLESRYGSDEDAQEGELAEPDEILTRLRGLKVEETGVSKVVRERAYSLAWHPSRTKLLIAAGDKVGNIGLWRIDGEESEKEGGGGVFHFKPHTGSVARLTFDPLDGNKLVSTSYDGTARRMDVEKGAFDQASAA----LVFANDVRNDTYLTDGHLMAEERLLLLSDGVGDVTAVDLRTSK---QVWKREAHEKKANTVHTHPTSRHLFVTVS 1032
G S YE RLE I KNA ASL + A A T +A KR + RGL+ +++++ P R S R++ K+P+G + PE RE + V + + R RL D V MDA+NV E T + GL + ++ + + + ++ ++L+ +K++ ++KVV +R +S+A HPS K ++ AGDK G IGLW ++ EG GVF F PHT V L F P D NKL S SYDGT R D K FD+ A +++ N D DG + L+ +D G+V VD R+ K V+ H + A TV HPT + FVT S
Sbjct: 140 GLSEYEKRRLENISKNADFFASLDIFKAKENFLALTPQAQKPKR-QTRGLKSQKRESAPVERRPRSLRIQNKSPDGAEL--PE------NFREPTYTPYV-----SDVRSRERLPSDPVKMDATNVKKEEKTDAGTDFVEGLAALARGEKTSVATDDKDLNKFASKLQEMKMKPRYMAKVVPDRIFSVAVHPSVDKTVVVAGDKWGKIGLWDVN----STEGDDGVFLFAPHTRPVNCLRFSPSDPNKLYSVSYDGTVRCGDFAKAVFDEVYVADEDEVIWTNFF--DFMSADGSSL----LVTQNDRTGNVVVVDTRSRKGGENVY--HVHSRNAKTVSVHPTMPNYFVTAS 466
BLAST of mRNA_H-elongata_contig14525.3096.1 vs. uniprot
Match: A0A8K0EHL9_BRALA (WDR76 protein n=2 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0EHL9_BRALA) HSP 1 Score: 132 bits (332), Expect = 1.720e-30 Identity = 107/349 (30.66%), Postives = 161/349 (46.13%), Query Frame = 1
Query: 13 SAYELARLEKIKKNAMVMASLGLIGAAGGMRATKKADLGKRVRARGLQPRQQKAYPA---RTRESARVRGKTPEGL---PMEDPEEAFNRNRLREGSTGAGVQAAAGAGLTIRPRLVGDVSMDASNVSAHET---QRLRKIMGGLESRYGSDEDAQEGELAEPDEILTRLRGLKVEETGVSKVVRERAYSLAWHPSRTKLLIAAGDKVGNIGLWRIDGEESEKEGGGGVFHFKPHTGSVARLTFDPLDGNKLVSTSYDGTARRMDVEKGAFDQASAALVFANDVRNDTYLTDGHLMAEE-RLLLLSDGVGDVTAVDLRT--SKQVWKREAHEKKANTVHTHPTSRHLFV 1023
S YE RL+ I++NA S+ + A + + K R RGLQPR+ P RTR S R++ K PEG P +P + R+ + G + M A+NV + R ++ + L + + ++ + L + + + E ++KV ER +SLA HPS TK+L+ AGDK G +GLW ++ KEG GV+ + PH+ + L F P+ KL SYDGT R + EK F + VF+ + D+ + ++E+ L+ G GDV VD RT S+ AH++ TV HPT RH FV
Sbjct: 200 SEYEKKRLQNIQENAAFFESIDIQSAKNNL-SEVSGSAKKAARPRGLQPRKNGKAPLPPPRTR-SLRLQNKNPEGAQLPPKPEPAPLYQNMHPRKPA--------------------GPMDMTATNVKGDDKGLGDRFQQDLHRLAKTSIPNSEVKDRLTLSQESFLKSAQSMTIAEERLAKVTPERIFSLAVHPSTTKMLVCAGDKWGRLGLWDVE----SKEGDDGVYLYNPHSRPINCLQFSPVHHGKLYMCSYDGTMRCAEFEKDVFSE-----VFSTEEDRDSLVKYFDFLSEDGTTCLVGLGDGDVAVVDTRTKGSEAEHLYPAHDRTIKTVSVHPTQRHYFV 517
BLAST of mRNA_H-elongata_contig14525.3096.1 vs. uniprot
Match: H3AEJ9_LATCH (WD repeat-containing protein 76 n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=H3AEJ9_LATCH) HSP 1 Score: 128 bits (321), Expect = 4.050e-29 Identity = 105/342 (30.70%), Postives = 169/342 (49.42%), Query Frame = 1
Query: 13 SAYELARLEKIKKNAMVMASLGLIGAAGGMRATKKADLGKRVRARGLQPRQQKAYPART--RESARVRGKTPEGLPMEDPEEAFNRNRLREGSTGAGVQAAAGAGLTIRPRLVGDVSMDASNVSAHETQRLRKIMGGLESRYGSDEDAQEGELAEPDEILTRLRGLKVEETGVSKVVRERAYSLAWHPSRTKLLIAAGDKVGNIGLWRIDGEESEKEGGGGVFHFKPHTGSVARLTFDPLDGNKLVSTSYDGTARRMDVEKGAFDQASAALVFANDVRNDTYLTDGHLMAEER-LLLLSDGVGDVTAVDLRT--SKQVWKREAHEKKANTVHTHPTSRHLFV 1023
SAYE RL IK+NA +SL ++ A R T+ ++++RG++ + K T R S R++ PEG PM PE + + E ST A ++P G + M N ++++ + + E + ++ + + L + + E V+K+++ R +S+A HPS TK+L+AAG K G IGLW ++ + + GV+ F+PH+ V L F P + +L+S SYDG+ R DV K FD+ V+ N+ +T ++ +AE+ L+LS GDV+ VD RT + W + TVH HP RH F+
Sbjct: 170 SAYEQKRLNNIKENAKFFSSLNILETAAVFRHTRT-----KIQSRGIKRIKPKQVEVMTVHRRSMRLQRLDPEGTPM--PEAMVPKQPVGEYSTYA-----------LKP--AGPIEMVPMN--QEDSKQTGEFLITWEEMSKIKTKCSKKKIMDLERYKASLNKMAITEKHVAKIIKHRIFSIAIHPSETKVLVAAGSKWGEIGLWDLNNQVGDD----GVYLFEPHSRPVNCLCFSPFNPAELLSGSYDGSMRCGDVVKAVFDE-----VYRNE---ETSVSSFDFLAEDASTLILSHLDGDVSLVDRRTPGTSHEWWAALNIGMIRTVHVHPVERHYFI 477
BLAST of mRNA_H-elongata_contig14525.3096.1 vs. uniprot
Match: A0A1S3HXN3_LINUN (WD repeat-containing protein 76 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3HXN3_LINUN) HSP 1 Score: 125 bits (315), Expect = 1.410e-28 Identity = 107/349 (30.66%), Postives = 162/349 (46.42%), Query Frame = 1
Query: 1 ENGPSAYELARLEKIKKNAMVMASLGLIGAAGGMRATKKADLGKRVRARGLQPRQQKAYPA-RTRESARVRGKTPEGLPMEDPEEAFNRNRLREGSTGAGVQAAAGAGLTIRPRLVGDVSMDASNVSAHET--QRLRKIMGGLESRYGSDEDAQEGELAEPDEILTRLRGLKVEETGVSKVVRERAYSLAWHPSRTKLLIAAGDKVGNIGLWRIDGEESEKEGGGGVFHFKPHTGSVARLTFDPLDGNKLVSTSYDGTARRMDVEKGAFDQASAALVFANDVRNDTYLTDGHLMAEERLLLLSDGVGDVTAVDLRTSKQVWKR--EAHEKKANTVHTHPTSRHLFVTVS 1032
E G S +E RL+ ++ NA +G+ A R + K RGL+ K P R S R++ K P G EE R + T + A+G LT+ L + + + ++H L+ + G E + E + E L + +K+ E V+KVV++R +S+A HPS T++ + AGDK G IGLW ++ KEG GVF ++PH+ V + FDP + ++L S SYDGT RR D K FD+ A D+ G + L++S GDV VD+RT + + H K T++ HP +H F+T S
Sbjct: 59 EEGLSEFERRRLKNLRDNAKFFEEMGIFKAKDAFRELSEKPKVKPTE-RGLKRGAVKPEPLPRRAPSLRLQNKDPAG------EELPERPTIFVEPTEEHPRKASGP-LTMCETLK---NAEENTETSHNNFLSSLKTLGEGKEKKSVKVESSLEN-------FLKACKRMKLHEDRVAKVVKDRIFSVAVHPSETRVFVCAGDKWGKIGLWDVE----SKEGDDGVFLYEPHSRPVNCMFFDPSNASRLYSCSYDGTIRRCDFNKAVFDELYATP------EEDSNRCSGFDFLDASNLVVSHSDGDVGLVDIRTKGLAAEHMYQCHRKSVKTINVHPVKKHYFLTGS 379
BLAST of mRNA_H-elongata_contig14525.3096.1 vs. uniprot
Match: W7TFK6_9STRA (Wd repeat-containing protein 76 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFK6_9STRA) HSP 1 Score: 125 bits (314), Expect = 3.060e-28 Identity = 111/359 (30.92%), Postives = 177/359 (49.30%), Query Frame = 1
Query: 7 GPSAYELARLEKIKKNAMVMASLGLIGAAG---GMRATKKA--DLGKRVRA--RGLQPRQQKAYPARTRESARVRGK-----TPEGLPMEDPEEAFNRN--RLREGSTGAGVQAAAGAGLTIRPRLVGDVSMDASNVSAHETQRLRKIMGGLESRYGSDEDAQEGELAEPD-EILTRLRGLKVEETGVSKVVRERAYSLAWHPSRTKLLIAAGDKVGNIGLWRIDGEESEKEGGGGVFHFKPHTGSVARLTFDPLDGNKLVSTSYDGTARRMDVEKGAFDQASAALVFANDVRNDTYLTDGHLMAEE-RLLLLSDGVGDVTAVDLRTSKQVWKR-EAHEKKANTVHTHPTSRHLFVTVS 1032
G SA+E+ R+E I++N ++ +LGL GA G+ AT +A KRV RGL+P +++ A TR SAR+ GK E L ME ++ R+ EG + G L+ ++ ++ SN ++ + R K ++PD + L L L + E + K+ R S+ HPS L++ A D G++G+W+++G++ VF F+PH VA + + P D +KL+S+S+DGT R +D+ K AFD LV +D+ D+ T ++ L L+ G +DLR+ K W EAH KK N++ HPT H+F++ S
Sbjct: 114 GMSAFEMERVENIRRNQEMLRALGL-GAMKTDIGLNATAQALQQARKRVAGSNRGLKPAKREPR-APTRRSARMEGKEAPFYNEEKLIMEVEAQSAREEEKRMDEGPLTLETLNRSEEGGADFLVLLKELLLERSNEASAQADRPTK--------------------SKPDMDYLESLSALTLAEEDILKLTPARISSMVVHPSERTLVVVAADVDGHLGVWQVEGDKE-------VFKFRPHISKVASMQYHPADPSKLISSSHDGTVRCLDLAKEAFD----LLVATDDIFQDSGFTCASQVSHSPENLYLAGYEGSTGLLDLRSRKLSWVHGEAHAKKVNSIEAHPTREHVFISSS 439
BLAST of mRNA_H-elongata_contig14525.3096.1 vs. uniprot
Match: A0A2D4C066_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C066_PYTIN) HSP 1 Score: 124 bits (312), Expect = 4.770e-28 Identity = 112/344 (32.56%), Postives = 154/344 (44.77%), Query Frame = 1
Query: 19 YELARLEKIKKNAMVMASLGLIGAAGGMRATKKADLGK---RVRARGLQPRQQKAYP-ARTRESARVRGKTPEGLPMEDPEEAFNRNRLREGSTGAGVQAAAGAGLTIRPRLVGDVSMDASNVSAHETQRLRKIMGGLESRYGSDEDAQEGELAEPDEILTRLRGLKVEETGVSKVVRERAYSLAWHPSRTKLLIAAGDKVGNIGLWRIDGEESEKEGGGGVFHFKPHTGSVARLTFDPLDGNKLVSTSYDGTARRMDVEKGAFDQASAALVFANDVRNDTYLTDGHLMAEERLLLLSDGVGDVTAVDLRT-SKQVWKR-EAHEKKANTVHTHPTSRHLFVTVS 1032
YE RLE I++N M S+G+ A R A + K RG+ +++ P R+S R+ GK E L + D + AF+ RE R D MDA V+ E R+++ + + DED E E A D L + E + KV +ER YS+A+HP R ++++A+GDK GN+ LW D E + V ++PHT V L F +KL+S S+DGT R D+ F + L T + G + LLS G V VD R SK R E HEKK NTVH HPT+ H T S
Sbjct: 99 YERKRLENIQRNLEFMRSMGVSTAKIAARTAAGAVVSKPSTSATTRGISTKRKPKEPLVPVRKSRRLEGKGAEELMLRDDKTAFSVEEYRE-----------------REPSRFDALMDADAVNV-EGDAGRRLLAHMAQQ---DEDEAEREPA-VDSSGVELVEYALAERDIVKVSQERVYSMAFHPRRDRVVVASGDKRGNLSLWSADAPEDDDNV---VVMYRPHTLPVTALHFHREHASKLLSASFDGTVREFDLTAAKFTE----LFAVESGTGVTSMAVGGASTSPDVFLLSCDDGVVCRVDRRVASKPTTTRFELHEKKINTVHVHPTAEHCLATAS 413
BLAST of mRNA_H-elongata_contig14525.3096.1 vs. uniprot
Match: UPI0016046C26 (WD repeat-containing protein 76-like isoform X1 n=4 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016046C26) HSP 1 Score: 124 bits (311), Expect = 1.130e-27 Identity = 113/371 (30.46%), Postives = 167/371 (45.01%), Query Frame = 1
Query: 13 SAYELARLEKIKKNAMVMASLGLIGAAGGMR--ATKKADLGKRVRARGLQPRQ---QKAYPARTRESARVRGKTPEGL---PMEDPEEAFN------------------RNRLREGSTGAGVQAAAGAGLTIRPRL-VGDVSMDASNVSAHE---TQRLRKIMGGLESRYGSDEDAQEGELAEPDEILTRLRGLKVEETGVSKVVRERAYSLAWHPSRTKLLIAAGDKVGNIGLWRIDGEESEKEGGGGVFHFKPHTGSVARLTFDPLDGNKLVSTSYDGTARRMDVEKGAFDQASAALVFANDVRNDTYLTDGHLMAEE-RLLLLSDGVGDVTAVDLRTSKQVWKR--EAHEKKANTVHTHPTSRHLFVT 1026
S YE RL+ I++NA S+ L A + +TKK+ R RGL R+ + P R R S R++ K PEG+ P +P + + +R G TG G PR G + M A+NV ++ + L +A+E + L ++ + + E V+KV ER +S+A HPS TK+L+ AGDK G +GLW ++ +E E GV+ + PH+ + L F P+ KL SYDGT R + EK F + VF+ + D + ++E+ L+ G GDV VD RT + AH++ TV HPT RH FVT
Sbjct: 208 SEYEKKRLQNIQENAAFFESIDLQSAKNNLSDVSTKKS-----ARPRGLTRRKWEHPEVPPPRPR-SLRLQNKNPEGVQLPPKPEPVPLYQDMHVERAGPTYRHFFVQKHSSVRRGLTGKH------KGTPFGPRKPAGPLDMAATNVKGDGKGLADSFQQELHRLAKTPIPKGEAKERLTVTQESFLKSVQSMAITEERVAKVTPERIFSVAVHPSTTKMLVCAGDKWGRLGLWDVESQEGED----GVYSYNPHSRPINCLQFSPVHHGKLYMCSYDGTMRCAEFEKNIFSE-----VFSTEEGTDQLVKYFDFLSEDGTTCLVGLGDGDVAVVDTRTKGTEAEHLYPAHDRTIKTVSVHPTQRHYFVT 557 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14525.3096.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig14525.3096.1 >prot_H-elongata_contig14525.3096.1 ID=prot_H-elongata_contig14525.3096.1|Name=mRNA_H-elongata_contig14525.3096.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=344bp ENGPSAYELARLEKIKKNAMVMASLGLIGAAGGMRATKKADLGKRVRARGback to top mRNA from alignment at H-elongata_contig14525:4505..7788+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig14525.3096.1 ID=mRNA_H-elongata_contig14525.3096.1|Name=mRNA_H-elongata_contig14525.3096.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3284bp|location=Sequence derived from alignment at H-elongata_contig14525:4505..7788+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig14525:4505..7788+ >mRNA_H-elongata_contig14525.3096.1 ID=mRNA_H-elongata_contig14525.3096.1|Name=mRNA_H-elongata_contig14525.3096.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2064bp|location=Sequence derived from alignment at H-elongata_contig14525:4505..7788+ (Himanthalia elongata Himel1 dioecious)back to top |