prot_H-elongata_contig144371.3046.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig144371.3046.1
Unique Nameprot_H-elongata_contig144371.3046.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length75
Homology
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BLAST of mRNA_H-elongata_contig144371.3046.1 vs. uniprot
Match: D7FR13_ECTSI (EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR13_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 2.210e-8
Identity = 23/36 (63.89%), Postives = 29/36 (80.56%), Query Frame = 0 
Query:    9 CKNEQCTRQPSFGIEGDRRASYCAEHKLPAMINVSS 44
            C++E C   P+FGIEGDRRA YCA+HKLP M+NV +
Sbjct:  860 CRHEGCQSHPNFGIEGDRRAVYCAKHKLPGMVNVKA 895
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig144371.3046.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FR13_ECTSI2.210e-863.89EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR13... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig144371contigH-elongata_contig144371:318..832 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig144371.3046.1mRNA_H-elongata_contig144371.3046.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig144371 318..850 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig144371.3046.1 ID=prot_H-elongata_contig144371.3046.1|Name=mRNA_H-elongata_contig144371.3046.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=75bp
MVDTRHPLCKNEQCTRQPSFGIEGDRRASYCAEHKLPAMINVSSRRCQHT
GCLRHPNFGFPGDRRATYCRCLES*
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