prot_H-elongata_contig144319.3044.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig144319.3044.1
Unique Nameprot_H-elongata_contig144319.3044.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length55
Homology
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BLAST of mRNA_H-elongata_contig144319.3044.1 vs. uniprot
Match: D7G0T9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0T9_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 3.450e-19
Identity = 38/55 (69.09%), Postives = 42/55 (76.36%), Query Frame = 0 
Query:    1 MTIFKLVDRETGEESVEYAKDMVFQRPCEGCQHLKSCIVAGHPLLDWVAEGNDSR 55
            MTIFKLVDR TGEESVEY+ DM+FQRPC  C HLK+CI+ GH L DW  EG   R
Sbjct:   57 MTIFKLVDRNTGEESVEYSPDMIFQRPCASCIHLKTCILGGHELTDWTPEGGRGR 111
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig144319.3044.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G0T9_ECTSI3.450e-1969.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig144319contigH-elongata_contig144319:587..1516 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig144319.3044.1mRNA_H-elongata_contig144319.3044.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig144319 587..1519 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig144319.3044.1 ID=prot_H-elongata_contig144319.3044.1|Name=mRNA_H-elongata_contig144319.3044.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=55bp
MTIFKLVDRETGEESVEYAKDMVFQRPCEGCQHLKSCIVAGHPLLDWVAE
GNDSR
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