prot_H-elongata_contig144071.3028.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig144071.3028.1
Unique Nameprot_H-elongata_contig144071.3028.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length118
Homology
[Close]
BLAST of mRNA_H-elongata_contig144071.3028.1 vs. uniprot
Match: D7G4I4_ECTSI (Histone H3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4I4_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 6.590e-65
Identity = 114/121 (94.21%), Postives = 115/121 (95.04%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKPGT----EIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQIARRIRGERS 117
            MARTKQTARKSTGGKAPRKQLATKAA  PGT    EIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ+ARRIRGERS
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAA-PPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 120
[Close]
BLAST of mRNA_H-elongata_contig144071.3028.1 vs. uniprot
Match: W4GZ05_9STRA (Histone H3 n=38 Tax=Oomycota TaxID=4762 RepID=W4GZ05_9STRA)

HSP 1 Score: 198 bits (504), Expect = 1.290e-63
Identity = 115/136 (84.56%), Postives = 117/136 (86.03%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARK---------------PGT----EIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQIARRIRGERS 117
            MARTKQTARKSTGGKAPRKQLATKAARK               PGT    EIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ+ARRIRGERS
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 136
[Close]
BLAST of mRNA_H-elongata_contig144071.3028.1 vs. uniprot
Match: A0A1Z5K8H0_FISSO (Histone H3 n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A1Z5K8H0_FISSO)

HSP 1 Score: 198 bits (504), Expect = 1.290e-63
Identity = 115/136 (84.56%), Postives = 117/136 (86.03%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARK---------------PGT----EIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQIARRIRGERS 117
            MARTKQTARKSTGGKAPRKQLATKAARK               PGT    EIRRYQKST+LLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ+ARRIRGERS
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTDLLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 136
[Close]
BLAST of mRNA_H-elongata_contig144071.3028.1 vs. uniprot
Match: A0A6V1P6C6_HETAK (Histone H3 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P6C6_HETAK)

HSP 1 Score: 197 bits (501), Expect = 4.500e-63
Identity = 114/136 (83.82%), Postives = 117/136 (86.03%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARK---------------PGT----EIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQIARRIRGERS 117
            MARTKQTARKSTGGKAPRKQLATKAARK               PGT    EIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLR+QGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ+ARRIRGERS
Sbjct:    7 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRYQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 142
[Close]
BLAST of mRNA_H-elongata_contig144071.3028.1 vs. uniprot
Match: A0A7S1BJN3_9STRA (Histone H3 n=22 Tax=Eukaryota TaxID=2759 RepID=A0A7S1BJN3_9STRA)

HSP 1 Score: 197 bits (501), Expect = 5.840e-63
Identity = 114/136 (83.82%), Postives = 117/136 (86.03%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARK---------------PGT----EIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQIARRIRGERS 117
            MARTKQTARKSTGGKAPRKQLATKAARK               PGT    EIRRYQKST+LLIRKLPFQRLVREIAQDFK+DLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ+ARRIRGERS
Sbjct:   15 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTDLLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 150
[Close]
BLAST of mRNA_H-elongata_contig144071.3028.1 vs. uniprot
Match: K0S7I6_THAOC (Histone domain-containing protein n=8 Tax=Bacillariophyta TaxID=2836 RepID=K0S7I6_THAOC)

HSP 1 Score: 198 bits (504), Expect = 1.360e-62
Identity = 115/136 (84.56%), Postives = 117/136 (86.03%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARK---------------PGT----EIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQIARRIRGERS 117
            MARTKQTARKSTGGKAPRKQLATKAARK               PGT    EIRRYQKST+LLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ+ARRIRGERS
Sbjct:   74 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTDLLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 209
[Close]
BLAST of mRNA_H-elongata_contig144071.3028.1 vs. uniprot
Match: A0A4C1ZSA9_EUMVA (Histone H3 n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1ZSA9_EUMVA)

HSP 1 Score: 196 bits (497), Expect = 1.410e-62
Identity = 110/134 (82.09%), Postives = 115/134 (85.82%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKPGT-----------------EIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQIARRIRGERS 117
            MARTKQTARKSTGGKAPRKQLATKAARKP T                 EIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQ+ARRIRGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 134
[Close]
BLAST of mRNA_H-elongata_contig144071.3028.1 vs. uniprot
Match: A0A183IEF0_9BILA (Histone H3 n=2 Tax=Eukaryota TaxID=2759 RepID=A0A183IEF0_9BILA)

HSP 1 Score: 195 bits (496), Expect = 1.450e-62
Identity = 109/124 (87.90%), Postives = 115/124 (92.74%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARK--PGT-----EIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQIARRIRGERS 117
            MARTKQTARKSTGGKAPRKQLATKAARK  P T      IRRYQKSTELL+RKLPFQRLVREIAQDFK+DLRFQGSAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQ+ARRIRGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGERNHIRRYQKSTELLVRKLPFQRLVREIAQDFKTDLRFQGSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 124
[Close]
BLAST of mRNA_H-elongata_contig144071.3028.1 vs. uniprot
Match: A0A6V7U9E7_9BILA (Histone H3 n=1 Tax=Meloidogyne enterolobii TaxID=390850 RepID=A0A6V7U9E7_9BILA)

HSP 1 Score: 195 bits (496), Expect = 1.550e-62
Identity = 111/126 (88.10%), Postives = 115/126 (91.27%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARK--PGT-------EIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQIARRIRGERS 117
            MARTKQTARKSTGGKAPRKQLATKAARK  P T       EIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAVLALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQ+ARRIRGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERT 126
[Close]
BLAST of mRNA_H-elongata_contig144071.3028.1 vs. uniprot
Match: A0A444TKR0_ARMVU (Histone H3 n=2 Tax=Pancrustacea TaxID=197562 RepID=A0A444TKR0_ARMVU)

HSP 1 Score: 195 bits (495), Expect = 2.130e-62
Identity = 110/125 (88.00%), Postives = 115/125 (92.00%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARK--PGT------EIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQIARRIRGERS 117
            MARTKQTARKSTGGKAPRKQLATKAARK  P T      EIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQ+ARRIRGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 125
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig144071.3028.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4I4_ECTSI6.590e-6594.21Histone H3 n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
W4GZ05_9STRA1.290e-6384.56Histone H3 n=38 Tax=Oomycota TaxID=4762 RepID=W4GZ... [more]
A0A1Z5K8H0_FISSO1.290e-6384.56Histone H3 n=2 Tax=Bacillariophyta TaxID=2836 RepI... [more]
A0A6V1P6C6_HETAK4.500e-6383.82Histone H3 n=1 Tax=Heterosigma akashiwo TaxID=2829... [more]
A0A7S1BJN3_9STRA5.840e-6383.82Histone H3 n=22 Tax=Eukaryota TaxID=2759 RepID=A0A... [more]
K0S7I6_THAOC1.360e-6284.56Histone domain-containing protein n=8 Tax=Bacillar... [more]
A0A4C1ZSA9_EUMVA1.410e-6282.09Histone H3 n=1 Tax=Eumeta variegata TaxID=151549 R... [more]
A0A183IEF0_9BILA1.450e-6287.90Histone H3 n=2 Tax=Eukaryota TaxID=2759 RepID=A0A1... [more]
A0A6V7U9E7_9BILA1.550e-6288.10Histone H3 n=1 Tax=Meloidogyne enterolobii TaxID=3... [more]
A0A444TKR0_ARMVU2.130e-6288.00Histone H3 n=2 Tax=Pancrustacea TaxID=197562 RepID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000164Histone H3/CENP-APRINTSPR00622HISTONEH3coord: 95..116
score: 90.32
coord: 3..17
score: 37.39
coord: 79..95
score: 96.93
coord: 61..79
score: 76.89
IPR000164Histone H3/CENP-ASMARTSM00428h35coord: 20..117
e-value: 9.6E-61
score: 217.8
IPR000164Histone H3/CENP-APANTHERPTHR11426HISTONE H3coord: 1..28
coord: 32..116
IPR000164Histone H3/CENP-APROSITEPS00959HISTONE_H3_2coord: 48..56
IPR000164Histone H3/CENP-APROSITEPS00322HISTONE_H3_1coord: 15..21
IPR009072Histone-foldGENE3D1.10.20.10coord: 2..117
e-value: 1.7E-56
score: 191.8
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 2..114
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 1..113
e-value: 3.4E-41
score: 140.7
NoneNo IPR availablePANTHERPTHR11426:SF224coord: 1..28
coord: 32..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig144071contigH-elongata_contig144071:224..611 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig144071.3028.1mRNA_H-elongata_contig144071.3028.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig144071 224..611 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig144071.3028.1 ID=prot_H-elongata_contig144071.3028.1|Name=mRNA_H-elongata_contig144071.3028.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=118bp
MARTKQTARKSTGGKAPRKQLATKAARKPGTEIRRYQKSTELLIRKLPFQ
RLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVT
IMPKDIQIARRIRGERS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000164Histone_H3/CENP-A
IPR009072Histone-fold
IPR007125Histone_H2A/H2B/H3