prot_H-elongata_contig143700.3008.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig143700.3008.1
Unique Nameprot_H-elongata_contig143700.3008.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length90
Homology
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BLAST of mRNA_H-elongata_contig143700.3008.1 vs. uniprot
Match: D8LEH3_ECTSI (VHS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEH3_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 1.160e-38
Identity = 74/90 (82.22%), Postives = 80/90 (88.89%), Query Frame = 0 
Query:    1 MVPPTIEALMDIMECSRDLTELLDNDAAPDVVDQTRSLVEQVIKKVEELEREGNPDEKDMDRYLKAHDDLQTVLRVYEDVLDGKEILPLS 90
            MVPPTIEALMDIME S+DLTELL N+ APDVVDQTR LV+QVIKKVE+L   GNPDEKD+DRYLKAHDDLQTVLRVYE V+DG E LPLS
Sbjct:  264 MVPPTIEALMDIMEGSKDLTELLGNEVAPDVVDQTRDLVQQVIKKVEDLGHSGNPDEKDLDRYLKAHDDLQTVLRVYEGVVDGSETLPLS 353
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BLAST of mRNA_H-elongata_contig143700.3008.1 vs. uniprot
Match: A0A6H5JQS7_9PHAE (VHS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQS7_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 1.010e-37
Identity = 74/90 (82.22%), Postives = 81/90 (90.00%), Query Frame = 0 
Query:    1 MVPPTIEALMDIMECSRDLTELLDNDAAPDVVDQTRSLVEQVIKKVEELEREGNPDEKDMDRYLKAHDDLQTVLRVYEDVLDGKEILPLS 90
            MVPPTIEALMDIME S+DLTELL N+ APDVVDQTR LV+QVIKKVE+L + GNPDEKD+DRYLKAHDDLQTVLRVYE V+DG E LPLS
Sbjct:  269 MVPPTIEALMDIMEGSKDLTELLGNEVAPDVVDQTRDLVQQVIKKVEDLGQSGNPDEKDLDRYLKAHDDLQTVLRVYEGVVDGSETLPLS 358
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig143700.3008.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEH3_ECTSI1.160e-3882.22VHS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JQS7_9PHAE1.010e-3782.22VHS domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 32..52
NoneNo IPR availableSUPERFAMILY89009GAT-like domaincoord: 4..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig143700contigH-elongata_contig143700:332..958 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig143700.3008.1mRNA_H-elongata_contig143700.3008.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig143700 311..958 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig143700.3008.1 ID=prot_H-elongata_contig143700.3008.1|Name=mRNA_H-elongata_contig143700.3008.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=90bp
MVPPTIEALMDIMECSRDLTELLDNDAAPDVVDQTRSLVEQVIKKVEELE
REGNPDEKDMDRYLKAHDDLQTVLRVYEDVLDGKEILPLS
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