mRNA_H-elongata_contig143643.3006.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig143643.3006.1
Unique NamemRNA_H-elongata_contig143643.3006.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig143643.3006.1 vs. uniprot
Match: A0A2R4QQ80_9PHAE (NADH dehydrogenase subunit 9 n=3 Tax=Fucus TaxID=3011 RepID=A0A2R4QQ80_9PHAE)

HSP 1 Score: 355 bits (912), Expect = 1.630e-123
Identity = 165/188 (87.77%), Postives = 178/188 (94.68%), Query Frame = 1 
Query:   43 MFRYLIIYTVSLTRLLPIQTFKVFGHEIVISVSKKYLLATLMFLHKHSNSSFQLLTSISGVDYPEREERFEIVYELLNVRSNCRIRVKTHTDEINPLPSVVNIYPCANWWEREIWDLFGVFFSGHPDLRRLLTDYGFEGHPLRKDFPLSGYFELRYDEDHRVVVCEPIELTQEFRSFDFHTPWSADIK 606
            MFR LI+Y  SLTRLLP+QTF+VFGHEIVI+VSKKYLLATLMFLH HSNS++QLLTSISGVDYPER+ERFEIVY+LLN+RSN RIR+KT TDEINPLPSVV+IYP ANWWEREIWDLFGVFFSGHPDLRRLLTDYGFEGHPLRKDFPLSGYFELRYDED RVVVCEPIELTQEFR+FDFH PWS D+K
Sbjct:    1 MFRSLIVYATSLTRLLPVQTFQVFGHEIVINVSKKYLLATLMFLHHHSNSNYQLLTSISGVDYPERDERFEIVYDLLNIRSNSRIRIKTQTDEINPLPSVVSIYPSANWWEREIWDLFGVFFSGHPDLRRLLTDYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEPIELTQEFRTFDFHIPWSQDLK 188
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BLAST of mRNA_H-elongata_contig143643.3006.1 vs. uniprot
Match: A0A0U2KE80_9PHAE (NADH dehydrogenase subunit 9 n=58 Tax=Phaeophyceae TaxID=2870 RepID=A0A0U2KE80_9PHAE)

HSP 1 Score: 342 bits (876), Expect = 4.830e-118
Identity = 156/184 (84.78%), Postives = 173/184 (94.02%), Query Frame = 1 
Query:   43 MFRYLIIYTVSLTRLLPIQTFKVFGHEIVISVSKKYLLATLMFLHKHSNSSFQLLTSISGVDYPEREERFEIVYELLNVRSNCRIRVKTHTDEINPLPSVVNIYPCANWWEREIWDLFGVFFSGHPDLRRLLTDYGFEGHPLRKDFPLSGYFELRYDEDHRVVVCEPIELTQEFRSFDFHTPWS 594
            MF  LI+Y +SLTRL+P+QTF+VFGHEIVISVSKKYLLATL FLH HSN +FQ+LTSISGVDYPEREERFEIVY+LLNVRSNCR+R+KTHTDEINPLPSVV+++P ANWWEREIWDLFGVFFS HPDLRR+LTDYGFEGHPLRKDFPLSGYFELRYDED +VVVCE IEL+QEFRSF+FH PWS
Sbjct:    1 MFSSLIVYAISLTRLVPVQTFQVFGHEIVISVSKKYLLATLTFLHHHSNGNFQMLTSISGVDYPEREERFEIVYDLLNVRSNCRLRIKTHTDEINPLPSVVSLFPSANWWEREIWDLFGVFFSNHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQKVVVCEAIELSQEFRSFNFHVPWS 184
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BLAST of mRNA_H-elongata_contig143643.3006.1 vs. uniprot
Match: A0A8F0FDI1_9PHAE (NADH dehydrogenase subunit 9 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0FDI1_9PHAE)

HSP 1 Score: 340 bits (873), Expect = 1.390e-117
Identity = 158/186 (84.95%), Postives = 174/186 (93.55%), Query Frame = 1 
Query:   43 MFRYLIIYTVSLTRLLPIQTFKVFGHEIVISVSKKYLLATLMFLHKHSNSSFQLLTSISGVDYPEREERFEIVYELLNVRSNCRIRVKTHTDEINPLPSVVNIYPCANWWEREIWDLFGVFFSGHPDLRRLLTDYGFEGHPLRKDFPLSGYFELRYDEDHRVVVCEPIELTQEFRSFDFHTPWSAD 600
            MF  LI+Y  SLTRL+P+QTF+VFGHEIVISVSKKYLLATL+FLH HSN ++QLLTSISGVDYPEREERFEIVY+LLN+RSN R+RVKT+TDEINPLPSVV+++P ANWWEREIWDLFGVFFS HPDLRR+LTDYGFEGHPLRKDFPLSGYFELRYDED RVVVCE IELTQEFRSFDFHTPWS +
Sbjct:    1 MFSSLIVYATSLTRLVPVQTFQVFGHEIVISVSKKYLLATLIFLHHHSNGNYQLLTSISGVDYPEREERFEIVYDLLNLRSNSRLRVKTYTDEINPLPSVVSLFPSANWWEREIWDLFGVFFSDHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEAIELTQEFRSFDFHTPWSQN 186
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BLAST of mRNA_H-elongata_contig143643.3006.1 vs. uniprot
Match: A0A0U1XC91_SCYLO (NADH dehydrogenase subunit 9 n=2 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A0U1XC91_SCYLO)

HSP 1 Score: 337 bits (863), Expect = 4.630e-116
Identity = 157/186 (84.41%), Postives = 170/186 (91.40%), Query Frame = 1 
Query:   43 MFRYLIIYTVSLTRLLPIQTFKVFGHEIVISVSKKYLLATLMFLHKHSNSSFQLLTSISGVDYPEREERFEIVYELLNVRSNCRIRVKTHTDEINPLPSVVNIYPCANWWEREIWDLFGVFFSGHPDLRRLLTDYGFEGHPLRKDFPLSGYFELRYDEDHRVVVCEPIELTQEFRSFDFHTPWSAD 600
            MF  LIIY  SLTRLLP+QTF+VFGHEIVISVSK YLL TL FLH HSN ++Q+LTSISGVDYPEREERFEIVY+LLNVRSN RIR+KTHTDEINPLPSVV+++  ANWWEREIWDLFGVFFS HPDLRR+LTDYGFEGHPLRKDFPLSGYFELRYDED RVVVCEPIEL+QEFRSFDFH PWS +
Sbjct:    1 MFHSLIIYAKSLTRLLPVQTFQVFGHEIVISVSKNYLLPTLTFLHHHSNGNYQMLTSISGVDYPEREERFEIVYDLLNVRSNSRIRIKTHTDEINPLPSVVSLFTSANWWEREIWDLFGVFFSNHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEPIELSQEFRSFDFHIPWSQN 186
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BLAST of mRNA_H-elongata_contig143643.3006.1 vs. uniprot
Match: A0A516ICK1_9PHAE (NADH dehydrogenase subunit 9 n=2 Tax=Lessoniaceae TaxID=35120 RepID=A0A516ICK1_9PHAE)

HSP 1 Score: 336 bits (862), Expect = 6.580e-116
Identity = 152/186 (81.72%), Postives = 172/186 (92.47%), Query Frame = 1 
Query:   43 MFRYLIIYTVSLTRLLPIQTFKVFGHEIVISVSKKYLLATLMFLHKHSNSSFQLLTSISGVDYPEREERFEIVYELLNVRSNCRIRVKTHTDEINPLPSVVNIYPCANWWEREIWDLFGVFFSGHPDLRRLLTDYGFEGHPLRKDFPLSGYFELRYDEDHRVVVCEPIELTQEFRSFDFHTPWSAD 600
            MF  LI+Y  SLTRL+P+QTF+VFGHEIVISVSKKYLLATL FL+ HSN +FQ+LTSISGVDYPER+ERFEIVY+LLN+RSNCR+R+KTHTDEINPLPS+V+++P ANWWEREIWDLFGVFF  HPDLRR+LTDYGFEGHPLRKDFPLSGYFELRYDED +VVVCE IEL+QEFRSFDFH PWS +
Sbjct:    1 MFNSLIVYATSLTRLVPVQTFQVFGHEIVISVSKKYLLATLTFLYHHSNGNFQMLTSISGVDYPERKERFEIVYDLLNIRSNCRLRIKTHTDEINPLPSIVSLFPSANWWEREIWDLFGVFFYNHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQKVVVCEAIELSQEFRSFDFHVPWSQN 186
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BLAST of mRNA_H-elongata_contig143643.3006.1 vs. uniprot
Match: A0A0U1Z5T2_9PHAE (NADH dehydrogenase subunit 9 n=22 Tax=Sargassaceae TaxID=3014 RepID=A0A0U1Z5T2_9PHAE)

HSP 1 Score: 336 bits (861), Expect = 1.110e-115
Identity = 157/184 (85.33%), Postives = 168/184 (91.30%), Query Frame = 1 
Query:   43 MFRYLIIYTVSLTRLLPIQTFKVFGHEIVISVSKKYLLATLMFLHKHSNSSFQLLTSISGVDYPEREERFEIVYELLNVRSNCRIRVKTHTDEINPLPSVVNIYPCANWWEREIWDLFGVFFSGHPDLRRLLTDYGFEGHPLRKDFPLSGYFELRYDEDHRVVVCEPIELTQEFRSFDFHTPWS 594
            M   LIIY  SLTRLLP+QTF+VFGHEIVI+VSKKYLLA L FLH HSNS+F LLTSISGVDYP+REERFE+VYELLN+RSN RIR+KT TDEINPLPS+V IYP ANWWERE+WDL GVFFSGHPDLRR+LTDYGFEGHPLRKDFPLSGYFELRYDED RVVVCEPIELTQEFRSFDFH PWS
Sbjct:    1 MLNSLIIYANSLTRLLPVQTFEVFGHEIVINVSKKYLLAALTFLHHHSNSNFHLLTSISGVDYPDREERFEVVYELLNLRSNSRIRIKTCTDEINPLPSIVEIYPSANWWEREVWDLLGVFFSGHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEPIELTQEFRSFDFHIPWS 184
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BLAST of mRNA_H-elongata_contig143643.3006.1 vs. uniprot
Match: A0A1I9LW92_9PHAE (NADH dehydrogenase subunit 9 n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LW92_9PHAE)

HSP 1 Score: 328 bits (841), Expect = 1.040e-112
Identity = 152/183 (83.06%), Postives = 169/183 (92.35%), Query Frame = 1 
Query:   43 MFRYLIIYTVSLTRLLPIQTFKVFGHEIVISVSKKYLLATLMFLHKHSNSSFQLLTSISGVDYPEREERFEIVYELLNVRSNCRIRVKTHTDEINPLPSVVNIYPCANWWEREIWDLFGVFFSGHPDLRRLLTDYGFEGHPLRKDFPLSGYFELRYDEDHRVVVCEPIELTQEFRSFDFHTPW 591
            MF  LI+Y  SLTRLLP+QTF+VFGHEIVISVSK+YLLATL FLH HSN +FQ+L+SIS VDYPEREERFEIVY+LL+VRSN R+R+KTHTDEINPLPSVV+++P ANWWEREIWDLFGVFFS HPDLRR+LTDYGFEGHPLRKDFPLSGYFELRYDED RVVVCE IEL+QEFRSF+FH PW
Sbjct:    1 MFPSLIVYAKSLTRLLPVQTFQVFGHEIVISVSKRYLLATLTFLHHHSNGNFQMLSSISAVDYPEREERFEIVYDLLSVRSNSRLRIKTHTDEINPLPSVVSLFPGANWWEREIWDLFGVFFSNHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCESIELSQEFRSFNFHIPW 183
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BLAST of mRNA_H-elongata_contig143643.3006.1 vs. uniprot
Match: Q94YZ7_PYLLI (NADH dehydrogenase subunit 9 n=1 Tax=Pylaiella littoralis TaxID=2885 RepID=Q94YZ7_PYLLI)

HSP 1 Score: 325 bits (832), Expect = 2.450e-111
Identity = 147/184 (79.89%), Postives = 167/184 (90.76%), Query Frame = 1 
Query:   43 MFRYLIIYTVSLTRLLPIQTFKVFGHEIVISVSKKYLLATLMFLHKHSNSSFQLLTSISGVDYPEREERFEIVYELLNVRSNCRIRVKTHTDEINPLPSVVNIYPCANWWEREIWDLFGVFFSGHPDLRRLLTDYGFEGHPLRKDFPLSGYFELRYDEDHRVVVCEPIELTQEFRSFDFHTPWS 594
            M   L++Y  SLTRLLP+QTF+VFGHEIVISVSK +LL TL FLH HSN +FQ+LTSISGVD+PEREERFE+VY+LLNVRSN R+RV+THTDEINPLPS+ +++P ANWWEREIWDLFGVFFS HPDLRR+LTDYGFEGHPLRKDFPLSGYFELRYDED +VVVCE IEL+QEFR+FDFH PWS
Sbjct:    1 MLSSLVVYAKSLTRLLPVQTFQVFGHEIVISVSKNHLLGTLTFLHHHSNGNFQMLTSISGVDFPEREERFEVVYDLLNVRSNSRLRVRTHTDEINPLPSITSLFPSANWWEREIWDLFGVFFSNHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQKVVVCESIELSQEFRTFDFHMPWS 184
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BLAST of mRNA_H-elongata_contig143643.3006.1 vs. uniprot
Match: A0A8F0K105_9PHAE (NADH dehydrogenase subunit 9 n=1 Tax=Analipus japonicus TaxID=31333 RepID=A0A8F0K105_9PHAE)

HSP 1 Score: 323 bits (827), Expect = 1.320e-110
Identity = 151/187 (80.75%), Postives = 164/187 (87.70%), Query Frame = 1 
Query:   43 MFRYLIIYTVSLTRLLPIQTFKVFGHEIVISVSKKYLLATLMFLHKHSNSSFQLLTSISGVDYPEREERFEIVYELLNVRSNCRIRVKTHTDEINPLPSVVNIYPCANWWEREIWDLFGVFFSGHPDLRRLLTDYGFEGHPLRKDFPLSGYFELRYDEDHRVVVCEPIELTQEFRSFDFHTPWSADI 603
            MF  LI Y  SLTRLLP+QTF+VF HEIVISVSKKYLL TLMFL  H+N +FQLLT ISGVDYPER ERFEIVY+LL++R N RIRVKTHTDEINPLPS+V ++P ANWWEREIWDLFGVFFS HPDLRR+LTDYGFEGHPLRKDFPLSGYFELRYDED RVVVCE IEL+QEFRSF FHTPW   +
Sbjct:    1 MFHSLIAYATSLTRLLPVQTFEVFEHEIVISVSKKYLLVTLMFLRHHTNGNFQLLTCISGVDYPERVERFEIVYDLLSIRWNSRIRVKTHTDEINPLPSIVGLFPSANWWEREIWDLFGVFFSNHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEAIELSQEFRSFTFHTPWLQKV 187
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BLAST of mRNA_H-elongata_contig143643.3006.1 vs. uniprot
Match: Q2TUA8_DICDH (NADH dehydrogenase subunit 9 n=1 Tax=Dictyota dichotoma TaxID=2876 RepID=Q2TUA8_DICDH)

HSP 1 Score: 293 bits (750), Expect = 8.140e-99
Identity = 134/180 (74.44%), Postives = 156/180 (86.67%), Query Frame = 1 
Query:   55 LIIYTVSLTRLLPIQTFKVFGHEIVISVSKKYLLATLMFLHKHSNSSFQLLTSISGVDYPEREERFEIVYELLNVRSNCRIRVKTHTDEINPLPSVVNIYPCANWWEREIWDLFGVFFSGHPDLRRLLTDYGFEGHPLRKDFPLSGYFELRYDEDHRVVVCEPIELTQEFRSFDFHTPWS 594
            ++ Y   LT+LLPIQT+KV G E+VISVSK++LL  L+FLH H+N  FQLLT +SGVDYPERE RFEIVYELL++  NCRIRVKT+T+E+NP+ S V+++PCANWWEREIWDLFGVFF  HPDLRR+LTDYGFEGHPLRKDFPLSG+ ELRYDED RVVVCEPIEL+QEFR F F TPWS
Sbjct:    9 IVAYANKLTKLLPIQTYKVNGQEMVISVSKEHLLVVLIFLHHHTNGGFQLLTCVSGVDYPERENRFEIVYELLSLGYNCRIRVKTYTNEVNPVFSCVSLFPCANWWEREIWDLFGVFFFTHPDLRRILTDYGFEGHPLRKDFPLSGFVELRYDEDQRVVVCEPIELSQEFRMFSFSTPWS 188
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig143643.3006.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2R4QQ80_9PHAE1.630e-12387.77NADH dehydrogenase subunit 9 n=3 Tax=Fucus TaxID=3... [more]
A0A0U2KE80_9PHAE4.830e-11884.78NADH dehydrogenase subunit 9 n=58 Tax=Phaeophyceae... [more]
A0A8F0FDI1_9PHAE1.390e-11784.95NADH dehydrogenase subunit 9 n=1 Tax=Chorda asiati... [more]
A0A0U1XC91_SCYLO4.630e-11684.41NADH dehydrogenase subunit 9 n=2 Tax=Scytosiphonac... [more]
A0A516ICK1_9PHAE6.580e-11681.72NADH dehydrogenase subunit 9 n=2 Tax=Lessoniaceae ... [more]
A0A0U1Z5T2_9PHAE1.110e-11585.33NADH dehydrogenase subunit 9 n=22 Tax=Sargassaceae... [more]
A0A1I9LW92_9PHAE1.040e-11283.06NADH dehydrogenase subunit 9 n=1 Tax=Pleurocladia ... [more]
Q94YZ7_PYLLI2.450e-11179.89NADH dehydrogenase subunit 9 n=1 Tax=Pylaiella lit... [more]
A0A8F0K105_9PHAE1.320e-11080.75NADH dehydrogenase subunit 9 n=1 Tax=Analipus japo... [more]
Q2TUA8_DICDH8.140e-9974.44NADH dehydrogenase subunit 9 n=1 Tax=Dictyota dich... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig143643contigH-elongata_contig143643:1028..1633 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score220.7
Seed ortholog evalue6.2e-55
Seed eggNOG ortholog5334.XP_003037126.1
Preferred nameALI1
KEGG rclassRC00061
KEGG koko:K03936
KEGG TC3.D.1.6
KEGG ReactionR11945
KEGG Pathwayko00190,ko01100,ko04714,ko04723,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map04714,map04723,map04932,map05010,map05012,map05016
KEGG ModuleM00143
GOsGO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005747,GO:0006091,GO:0008137,GO:0008150,GO:0008152,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0019866,GO:0030964,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0032991,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045271,GO:0045333,GO:0050136,GO:0055114,GO:0070469,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:1902494,GO:1990204
EggNOG free text desc.Belongs to the complex I 30 kDa subunit family
EggNOG OGs228JS@155619,38BAK@33154,3NVZQ@4751,3UYB9@5204,3W4JD@5338,COG0852@1,KOG1713@2759
EC1.6.5.3,1.6.99.3
COG Functional cat.C
Best tax levelAgaricales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Exons1
Model size608
Cds size606
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929852.1521535-CDS-H-elongata_contig143643:1027..16331622929852.1521535-CDS-H-elongata_contig143643:1027..1633Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig143643 1028..1633 +
1691679183.4425755-CDS-H-elongata_contig143643:1027..16331691679183.4425755-CDS-H-elongata_contig143643:1027..1633Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig143643 1028..1633 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig143643.3006.1prot_H-elongata_contig143643.3006.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig143643 1028..1633 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig143643.3006.1

>prot_H-elongata_contig143643.3006.1 ID=prot_H-elongata_contig143643.3006.1|Name=mRNA_H-elongata_contig143643.3006.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=202bp
GTSLVAPGIKRYNKMFRYLIIYTVSLTRLLPIQTFKVFGHEIVISVSKKY
LLATLMFLHKHSNSSFQLLTSISGVDYPEREERFEIVYELLNVRSNCRIR
VKTHTDEINPLPSVVNIYPCANWWEREIWDLFGVFFSGHPDLRRLLTDYG
FEGHPLRKDFPLSGYFELRYDEDHRVVVCEPIELTQEFRSFDFHTPWSAD
IK
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mRNA from alignment at H-elongata_contig143643:1028..1633+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig143643.3006.1 ID=mRNA_H-elongata_contig143643.3006.1|Name=mRNA_H-elongata_contig143643.3006.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=606bp|location=Sequence derived from alignment at H-elongata_contig143643:1028..1633+ (Himanthalia elongata Himel1 dioecious)
GGTACCTCTTTAGTTGCCCCCGGAATAAAACGATATAATAAAATGTTTCG
CTATTTAATCATATACACTGTTAGCCTTACGCGACTTTTGCCGATTCAAA
CGTTTAAAGTGTTTGGGCATGAGATTGTTATTAGTGTATCTAAAAAATAT
TTGTTGGCTACACTAATGTTTTTACACAAACATAGTAATAGTAGTTTTCA
ATTACTTACATCAATTTCTGGTGTAGATTACCCTGAACGAGAAGAACGTT
TTGAGATTGTATATGAGCTATTGAATGTAAGATCGAATTGTAGAATTAGG
GTTAAAACACATACAGATGAAATAAATCCTTTACCATCTGTTGTGAATAT
ATACCCTTGCGCAAATTGGTGGGAACGTGAAATTTGGGATTTATTTGGGG
TTTTTTTTTCGGGGCACCCTGATTTACGTCGTCTACTTACAGATTACGGT
TTTGAAGGTCATCCTTTAAGGAAAGATTTCCCGTTAAGTGGTTATTTTGA
GTTGCGTTATGATGAAGATCACAGAGTTGTTGTTTGCGAACCTATTGAAT
TAACCCAAGAGTTTCGCTCATTTGATTTTCATACTCCTTGGTCCGCAGAT
ATAAAA
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Coding sequence (CDS) from alignment at H-elongata_contig143643:1028..1633+

>mRNA_H-elongata_contig143643.3006.1 ID=mRNA_H-elongata_contig143643.3006.1|Name=mRNA_H-elongata_contig143643.3006.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1212bp|location=Sequence derived from alignment at H-elongata_contig143643:1028..1633+ (Himanthalia elongata Himel1 dioecious)
GGTACCTCTTTAGTTGCCCCCGGAATAAAACGATATAATAAAATGTTTCG
CTATTTAATCATATACACTGTTAGCCTTACGCGACTTTTGCCGATTCAAA
CGTTTAAAGTGTTTGGGCATGAGATTGTTATTAGTGTATCTAAAAAATAT
TTGTTGGCTACACTAATGTTTTTACACAAACATAGTAATAGTAGTTTTCA
ATTACTTACATCAATTTCTGGTGTAGATTACCCTGAACGAGAAGAACGTT
TTGAGATTGTATATGAGCTATTGAATGTAAGATCGAATTGTAGAATTAGG
GTTAAAACACATACAGATGAAATAAATCCTTTACCATCTGTTGTGAATAT
ATACCCTTGCGCAAATTGGTGGGAACGTGAAATTTGGGATTTATTTGGGG
TTTTTTTTTCGGGGCACCCTGATTTACGTCGTCTACTTACAGATTACGGT
TTTGAAGGTCATCCTTTAAGGAAAGATTTCCCGTTAAGTGGTTATTTTGA
GTTGCGTTATGATGAAGATCACAGAGTTGTTGTTTGCGAACCTATTGAAT
TAACCCAAGAGTTTCGCTCATTTGATTTTCATACTCCTTGGTCCGCAGAT
ATAAAAGGTACCTCTTTAGTTGCCCCCGGAATAAAACGATATAATAAAAT
GTTTCGCTATTTAATCATATACACTGTTAGCCTTACGCGACTTTTGCCGA
TTCAAACGTTTAAAGTGTTTGGGCATGAGATTGTTATTAGTGTATCTAAA
AAATATTTGTTGGCTACACTAATGTTTTTACACAAACATAGTAATAGTAG
TTTTCAATTACTTACATCAATTTCTGGTGTAGATTACCCTGAACGAGAAG
AACGTTTTGAGATTGTATATGAGCTATTGAATGTAAGATCGAATTGTAGA
ATTAGGGTTAAAACACATACAGATGAAATAAATCCTTTACCATCTGTTGT
GAATATATACCCTTGCGCAAATTGGTGGGAACGTGAAATTTGGGATTTAT
TTGGGGTTTTTTTTTCGGGGCACCCTGATTTACGTCGTCTACTTACAGAT
TACGGTTTTGAAGGTCATCCTTTAAGGAAAGATTTCCCGTTAAGTGGTTA
TTTTGAGTTGCGTTATGATGAAGATCACAGAGTTGTTGTTTGCGAACCTA
TTGAATTAACCCAAGAGTTTCGCTCATTTGATTTTCATACTCCTTGGTCC
GCAGATATAAAA
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