prot_H-elongata_contig143007.2970.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig143007.2970.1
Unique Nameprot_H-elongata_contig143007.2970.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length174
Homology
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BLAST of mRNA_H-elongata_contig143007.2970.1 vs. uniprot
Match: D7G4U9_ECTSI (PH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4U9_ECTSI)

HSP 1 Score: 211 bits (537), Expect = 7.490e-61
Identity = 106/177 (59.89%), Postives = 134/177 (75.71%), Query Frame = 0 
Query:    1 GAAHHEKDQAYEEAAFLQTNRFVAAYVVDEHSRMSYVNDILNEGFHQPGEHADGGRDLYRACVGANTAIEEFLALIQDFDHEMQGLEKLRRDQVGNR---GGLDGTVAAPKIQRFCEGYIALVGRLIASRLMLELSPFMDSSVAGTPSAPISSSRKQLIATRRKLDEVYGFRRQLNI 174
            GAA H KD+AYEEA +L+TNRF+AAYVVDE SR SY+ND+LN+GFH  G+ A   RD + AC G+ +AI E LAL +DF  EM+G+E+LRR   G+    G LDG V APKI+RFCE Y++LVGR I+SRLMLELSPFM++SVAG+ SAP  S+R +L+ TRR+LDE Y    Q+ I
Sbjct:  119 GAAQHAKDEAYEEATYLKTNRFLAAYVVDEQSRASYINDLLNDGFHHVGDRAGSERDAHNACAGSRSAIAELLALTEDFMKEMRGVEELRRGTQGSETSEGQLDGAVTAPKIERFCEEYMSLVGRTISSRLMLELSPFMETSVAGSSSAPTESTRAELVGTRRRLDEAYAATEQVVI 295
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig143007.2970.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G4U9_ECTSI7.490e-6159.89PH domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig143007contigH-elongata_contig143007:248..1218 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig143007.2970.1mRNA_H-elongata_contig143007.2970.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig143007 248..1218 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig143007.2970.1 ID=prot_H-elongata_contig143007.2970.1|Name=mRNA_H-elongata_contig143007.2970.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=174bp
GAAHHEKDQAYEEAAFLQTNRFVAAYVVDEHSRMSYVNDILNEGFHQPGE
HADGGRDLYRACVGANTAIEEFLALIQDFDHEMQGLEKLRRDQVGNRGGL
DGTVAAPKIQRFCEGYIALVGRLIASRLMLELSPFMDSSVAGTPSAPISS
SRKQLIATRRKLDEVYGFRRQLNI
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