mRNA_H-elongata_contig10352.292.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig10352.292.1
Unique NamemRNA_H-elongata_contig10352.292.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig10352.292.1 vs. uniprot
Match: D8LJA8_ECTSI (Ribosomal protein L19 n=2 Tax=Eukaryota TaxID=2759 RepID=D8LJA8_ECTSI)

HSP 1 Score: 259 bits (663), Expect = 3.500e-86
Identity = 143/159 (89.94%), Postives = 148/159 (93.08%), Query Frame = 1 
Query:   25 ISIRAAFRNGSQLVKDGLVIRLPAVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGEAARIKALKEQAEARKFKAKQRNERKEDRKKVAAEARAQEASA 501
            IS+  + +N  +LVKDGLVIRLP VVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGE ARIKALKEQAEARK KAKQ+NERKEDRKK AAEARA E SA
Sbjct:   32 ISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERKEDRKKAAAEARAAEVSA 190
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BLAST of mRNA_H-elongata_contig10352.292.1 vs. uniprot
Match: A0A835ZKQ0_9STRA (Ribosomal protein L19 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKQ0_9STRA)

HSP 1 Score: 191 bits (486), Expect = 2.730e-59
Identity = 106/157 (67.52%), Postives = 126/157 (80.25%), Query Frame = 1 
Query:   25 ISIRAAFRNGSQLVKDGLVIRLPAVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGEAARIKALKEQAEARKFKAKQRNERKEDRKKVAAEARAQEA 495
            IS+  + +N  +L KDGL+I+ P V+HSRARV  R+EAK+KGRHTGPGKR GTANARLPFKL+W RRMR+LRRMLRKYR+AKK+DKHLYH+LY+ CKGNQFKNKRVLMEAIHK K E  R +AL EQAEARK KA  + +RK  + + AA A   EA
Sbjct:   32 ISLANSRQNIRKLKKDGLIIKKPTVIHSRARVLARNEAKRKGRHTGPGKRHGTANARLPFKLLWMRRMRVLRRMLRKYRDAKKVDKHLYHKLYMLCKGNQFKNKRVLMEAIHKMKAETLRERALVEQAEARKAKASAKKDRKAKKAEEAAAAAQPEA 188
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BLAST of mRNA_H-elongata_contig10352.292.1 vs. uniprot
Match: K3X7E5_GLOUD (Ribosomal protein L19 n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X7E5_GLOUD)

HSP 1 Score: 188 bits (478), Expect = 5.580e-58
Identity = 101/150 (67.33%), Postives = 121/150 (80.67%), Query Frame = 1 
Query:    1 INPPTPTPISIRAAFRNGSQLVKDGLVIRLPAVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGEAARIKALKEQAEARKFKAKQRNERK 450
            ++P   T +++  + +N  +LVKDG +I+ P V+HSRAR   R+EAK+KGRHTG GKRRGTANARLPFK+IW RRMR+LRR+LRKYREAKKIDKH+YHELY+  KGNQFKNKRVLME IHK K E AR K LKEQ+EARK KAK   +RK
Sbjct:   24 LDPNESTELALANSRQNIRKLVKDGFIIKKPEVIHSRARFQKRNEAKRKGRHTGIGKRRGTANARLPFKVIWMRRMRVLRRLLRKYREAKKIDKHIYHELYMRSKGNQFKNKRVLMETIHKMKAERAREKTLKEQSEARKEKAKNARDRK 173
[Close]
BLAST of mRNA_H-elongata_contig10352.292.1 vs. uniprot
Match: A0A067BLM6_SAPPC (Ribosomal protein L19 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BLM6_SAPPC)

HSP 1 Score: 184 bits (467), Expect = 1.730e-56
Identity = 99/150 (66.00%), Postives = 121/150 (80.67%), Query Frame = 1 
Query:    1 INPPTPTPISIRAAFRNGSQLVKDGLVIRLPAVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGEAARIKALKEQAEARKFKAKQRNERK 450
            ++P   T I++  + +N  +LVKDG VIR P V+HSRAR   R+EAK+KGRHTG GKRRGTANARLPFK+IW RRMR+LRR+LRKYR+AKKID+H+YH+LY+  KGNQFKNKRVLME IHK K E  R KALK+Q+EARK KA+   +RK
Sbjct:   24 LDPNESTEIALANSRQNIRKLVKDGFVIRKPQVIHSRARFTKRNEAKRKGRHTGIGKRRGTANARLPFKVIWMRRMRVLRRLLRKYRDAKKIDRHMYHDLYMRAKGNQFKNKRVLMEVIHKLKSEHIREKALKDQSEARKEKARNARDRK 173
[Close]
BLAST of mRNA_H-elongata_contig10352.292.1 vs. uniprot
Match: A0A7S2V357_9STRA (Ribosomal protein L19 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V357_9STRA)

HSP 1 Score: 182 bits (463), Expect = 1.120e-55
Identity = 102/146 (69.86%), Postives = 120/146 (82.19%), Query Frame = 1 
Query:   25 ISIRAAFRNGSQLVKDGLVIRLPAVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGEAARIKALKEQAEARKFKAKQRNERKEDRK 462
            IS+  + +N  +LVKDGLVIR P VVHSRARV  R+EAK KGRHTG GKR GTANARLPFKLIW RR R+LRR+LRKYR+AKKIDKHLYH+LY+  KGNQFKNK+VLMEAIH+ K E AR KAL +QAEARK +A+ +  RK ++K
Sbjct:   32 ISMANSRQNIRKLVKDGLVIRKPQVVHSRARVVERNEAKAKGRHTGYGKRHGTANARLPFKLIWMRRARVLRRLLRKYRDAKKIDKHLYHDLYMRSKGNQFKNKKVLMEAIHRMKAEKAREKALADQAEARKTRARMKAARKAEKK 177
[Close]
BLAST of mRNA_H-elongata_contig10352.292.1 vs. uniprot
Match: M4C2P1_HYAAE (Ribosomal protein L19 n=26 Tax=Eukaryota TaxID=2759 RepID=M4C2P1_HYAAE)

HSP 1 Score: 182 bits (461), Expect = 1.600e-55
Identity = 99/150 (66.00%), Postives = 118/150 (78.67%), Query Frame = 1 
Query:    1 INPPTPTPISIRAAFRNGSQLVKDGLVIRLPAVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGEAARIKALKEQAEARKFKAKQRNERK 450
            ++P     I++  + +N  +LVKDG VI+ P V+HSRAR   R+EAK+KGRHTG GKR GTANARLPFK+IW RR+R+LRR+LRKYREAKKIDKH+YHELY+  KGNQFKNKRVLME IHK K E  R K LKEQ++ARK KAK   ERK
Sbjct:   24 LDPNESNEIALANSRQNIRKLVKDGFVIKKPQVIHSRARFTKRNEAKRKGRHTGIGKRHGTANARLPFKVIWMRRIRVLRRLLRKYREAKKIDKHIYHELYMRSKGNQFKNKRVLMETIHKMKAERHREKTLKEQSDARKEKAKSARERK 173
[Close]
BLAST of mRNA_H-elongata_contig10352.292.1 vs. uniprot
Match: A0A484E6K8_BRELC (Ribosomal protein L19 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E6K8_BRELC)

HSP 1 Score: 181 bits (458), Expect = 4.420e-55
Identity = 98/150 (65.33%), Postives = 119/150 (79.33%), Query Frame = 1 
Query:    1 INPPTPTPISIRAAFRNGSQLVKDGLVIRLPAVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGEAARIKALKEQAEARKFKAKQRNERK 450
            ++P     I++  + +N  +LVKDG VI+ P V+HSRAR   R+EAK+KGRHTG GKRRGTANARLPFK+IW RR+R+LRR+LRKYREAKKIDKH+YH+LY+  KGNQFKNKRVLME IHK K E  R K LKEQ+EARK KA+   +RK
Sbjct:   24 LDPNESNEIALANSRQNIRKLVKDGFVIKKPQVIHSRARFTKRNEAKRKGRHTGIGKRRGTANARLPFKVIWMRRIRVLRRLLRKYREAKKIDKHIYHDLYMRSKGNQFKNKRVLMETIHKMKAERHREKTLKEQSEARKEKARLARDRK 173
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BLAST of mRNA_H-elongata_contig10352.292.1 vs. uniprot
Match: A0A7S2G695_9STRA (Ribosomal protein L19 n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G695_9STRA)

HSP 1 Score: 180 bits (457), Expect = 8.570e-55
Identity = 100/154 (64.94%), Postives = 121/154 (78.57%), Query Frame = 1 
Query:    1 INPPTPTPISIRAAFRNGSQLVKDGLVIRLPAVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGEAARIKALKEQAEARKFKAKQRNERKEDRK 462
            ++P     IS+  + +N  +L+KDG V + P VVHSR+RV    +AK+KGRHTG GKR+GTA+ARLP K++W RRMR+LRR+LRKYREAKKID+HLYHELY+ CKGNQFKNKRVLMEAIHK K   AR KAL EQA+ARK KAK + ERK  RK
Sbjct:   24 LDPNESNEISMANSRQNIRKLIKDGFVFKKPQVVHSRSRVMRHLDAKRKGRHTGYGKRKGTADARLPLKVLWMRRMRVLRRLLRKYREAKKIDRHLYHELYMRCKGNQFKNKRVLMEAIHKMKAGKAREKALMEQADARKNKAKAKTERKMKRK 177
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BLAST of mRNA_H-elongata_contig10352.292.1 vs. uniprot
Match: A0A3F2RJK4_9STRA (Ribosomal_L19e domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RJK4_9STRA)

HSP 1 Score: 182 bits (462), Expect = 1.240e-54
Identity = 98/144 (68.06%), Postives = 116/144 (80.56%), Query Frame = 1 
Query:    1 INPPTPTPISIRAAFRNGSQLVKDGLVIRLPAVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGEAARIKALKEQAEARKFKAK 432
            ++P     I++  + +N  +LVKDG VI+ P V+HSRAR   R+EAK+KGRHTG GKRRGTANARLPFK+IW RR+R+LRR+LRKYREAKKIDKH+YHELY+  KGNQFKNKRVLME IHK K E  R K LKEQ+EARK KAK
Sbjct:  104 LDPNESNEIALANSRQNIRKLVKDGFVIKKPQVIHSRARFTKRNEAKRKGRHTGIGKRRGTANARLPFKVIWMRRIRVLRRLLRKYREAKKIDKHIYHELYMRSKGNQFKNKRVLMETIHKMKAERHREKTLKEQSEARKEKAK 247
[Close]
BLAST of mRNA_H-elongata_contig10352.292.1 vs. uniprot
Match: A0A6U3PTD9_9STRA (Ribosomal protein L19 n=3 Tax=Stramenopiles TaxID=33634 RepID=A0A6U3PTD9_9STRA)

HSP 1 Score: 179 bits (455), Expect = 1.300e-54
Identity = 98/145 (67.59%), Postives = 119/145 (82.07%), Query Frame = 1 
Query:   25 ISIRAAFRNGSQLVKDGLVIRLPAVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGEAARIKALKEQAEARKFKAKQRNERKEDR 459
            IS+  + RN ++L KDGL+I+ P VVHSRARV LR+EAK+KGRHTG GKRRGTANARLPFK+IW RR+R+LRR+L+K R+AKKIDKH+YH LY+  KGNQFKNKRVL+E IH  K E A+ KAL EQAEARK +A+ R  RK +R
Sbjct:   32 ISLANSRRNVARLHKDGLIIKKPVVVHSRARVALRNEAKRKGRHTGTGKRRGTANARLPFKVIWMRRIRVLRRLLKKMRDAKKIDKHIYHSLYMLAKGNQFKNKRVLLETIHTMKAEKAKEKALAEQAEARKGRARARLARKAER 176
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10352.292.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJA8_ECTSI3.500e-8689.94Ribosomal protein L19 n=2 Tax=Eukaryota TaxID=2759... [more]
A0A835ZKQ0_9STRA2.730e-5967.52Ribosomal protein L19 n=2 Tax=Tribonema minus TaxI... [more]
K3X7E5_GLOUD5.580e-5867.33Ribosomal protein L19 n=2 Tax=Pythiaceae TaxID=478... [more]
A0A067BLM6_SAPPC1.730e-5666.00Ribosomal protein L19 n=4 Tax=Saprolegniaceae TaxI... [more]
A0A7S2V357_9STRA1.120e-5569.86Ribosomal protein L19 n=1 Tax=Fibrocapsa japonica ... [more]
M4C2P1_HYAAE1.600e-5566.00Ribosomal protein L19 n=26 Tax=Eukaryota TaxID=275... [more]
A0A484E6K8_BRELC4.420e-5565.33Ribosomal protein L19 n=1 Tax=Bremia lactucae TaxI... [more]
A0A7S2G695_9STRA8.570e-5564.94Ribosomal protein L19 n=2 Tax=Dictyocha speculum T... [more]
A0A3F2RJK4_9STRA1.240e-5468.06Ribosomal_L19e domain-containing protein n=1 Tax=P... [more]
A0A6U3PTD9_9STRA1.300e-5467.59Ribosomal protein L19 n=3 Tax=Stramenopiles TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10352contigH-elongata_contig10352:6953..8865 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score263.1
Seed ortholog evalue9e-68
Seed eggNOG ortholog2880.D8LJA8
Preferred nameRPL19
KEGG rclassRC00002,RC00017
KEGG koko:K00844,ko:K02885,ko:K14780
KEGG ReactionR00299,R00760,R00867,R01326,R01600,R01786,R01961,R03920
KEGG Pathwayko00010,ko00051,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,ko03010,ko04066,ko04910,ko04930,ko04973,ko05230,map00010,map00051,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200,map03010,map04066,map04910,map04930,map04973,map05230
KEGG ModuleM00001,M00177,M00179,M00549
GOsGO:0000184,GO:0000956,GO:0001889,GO:0002181,GO:0002376,GO:0002520,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005844,GO:0006139,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0007275,GO:0007568,GO:0008104,GO:0008150,GO:0008152,GO:0008340,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009892,GO:0009987,GO:0010259,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0015031,GO:0015833,GO:0015934,GO:0016070,GO:0016071,GO:0019222,GO:0019439,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0030097,GO:0030684,GO:0030687,GO:0031099,GO:0031100,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0042788,GO:0042886,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0046483,GO:0046700,GO:0046907,GO:0048513,GO:0048519,GO:0048534,GO:0048731,GO:0048732,GO:0048856,GO:0050789,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0060255,GO:0061008,GO:0065007,GO:0070180,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0090304,GO:0097159,GO:0097421,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1990904,GO:1990932
EggNOG free text desc.structural constituent of ribosome
EggNOG OGsCOG2147@1,KOG1696@2759
EC2.7.1.1,3.6.4.13
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko03009,ko03011,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRibosomal protein L19/L19e domain
Ec32 orthologEc-02_005390.1
Exons4
Model size504
Cds size504
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10352.292.1prot_H-elongata_contig10352.292.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig10352 6953..8865 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929570.3178399-CDS-H-elongata_contig10352:6952..70511622929570.3178399-CDS-H-elongata_contig10352:6952..7051Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10352 6953..7051 -
1691679074.8088264-CDS-H-elongata_contig10352:6952..70511691679074.8088264-CDS-H-elongata_contig10352:6952..7051Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10352 6953..7051 -
1622929570.3369753-CDS-H-elongata_contig10352:7421..75271622929570.3369753-CDS-H-elongata_contig10352:7421..7527Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10352 7422..7527 -
1691679074.82209-CDS-H-elongata_contig10352:7421..75271691679074.82209-CDS-H-elongata_contig10352:7421..7527Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10352 7422..7527 -
1622929570.3531358-CDS-H-elongata_contig10352:8164..83201622929570.3531358-CDS-H-elongata_contig10352:8164..8320Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10352 8165..8320 -
1691679074.8378646-CDS-H-elongata_contig10352:8164..83201691679074.8378646-CDS-H-elongata_contig10352:8164..8320Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10352 8165..8320 -
1622929570.3678546-CDS-H-elongata_contig10352:8722..88651622929570.3678546-CDS-H-elongata_contig10352:8722..8865Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10352 8723..8865 -
1691679074.8472676-CDS-H-elongata_contig10352:8722..88651691679074.8472676-CDS-H-elongata_contig10352:8722..8865Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10352 8723..8865 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig10352.292.1

>prot_H-elongata_contig10352.292.1 ID=prot_H-elongata_contig10352.292.1|Name=mRNA_H-elongata_contig10352.292.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=168bp
INPPTPTPISIRAAFRNGSQLVKDGLVIRLPAVVHSRARVNLRHEAKKKG
RHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHEL
YLGCKGNQFKNKRVLMEAIHKKKGEAARIKALKEQAEARKFKAKQRNERK
EDRKKVAAEARAQEASA*
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mRNA from alignment at H-elongata_contig10352:6953..8865-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig10352.292.1 ID=mRNA_H-elongata_contig10352.292.1|Name=mRNA_H-elongata_contig10352.292.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1913bp|location=Sequence derived from alignment at H-elongata_contig10352:6953..8865- (Himanthalia elongata Himel1 dioecious)
ATCAATCCCCCCACACCGACGCCTATCTCGATACGCGCGGCGTTCCGTAA
TGGTTCGCAGTTGGTCAAGGATGGCCTCGTGATTCGGTTGCCCGCGGTGG
TGCACTCGCGCGCTCGCGTCAACTTGCGCCACGAGGCGAAGAAGTGAGTT
CGTTCGACGCTCTCAGGATTTCATATGTTGCACATCTGTGTCCAAAGGGC
ATGTATAATCAAGCCGCTGGCCACGCCATGACATGTTGTCGTTAGCCCCT
CATAACGTTTTCCGATCTCAAAGTGGGCTTAACGGGTGAAAATAAAAACC
ACGGGGTCCAAATACCAAAGCGTTTTGAGGTGCTGGACTTGCTAGAAGTA
AGCGCGACAAAAGTTGACGTGTGGGGTTGTTAATATCAGCGATTTAAACG
CACTTGATTGTTTTGTAGCACTCGTGTGCTGAGGTCCTCGTTTGTGGGCT
TCATTTAGCTAGCGTAAAATGTTCCCAACATATGCTGTATTTTCGTTAAA
ATATTATTAATGCCTACTGTCCGTGGCGGCGTTTCGCGCGAGCAGGAAGG
GAAGGCACACCGGCCCCGGTAAGCGCAGGGGTACCGCAAACGCGCGGCTC
CCCTTCAAGCTTATCTGGCAGCGCCGCATGCGCATCCTCCGCCGCATGCT
CCGCAAGTACCGCGAAGCCAAGAAGATCGACAAGCACCTTTACCACGAGC
TGTAAGTGCGGTACAAGTTTTGCTAGCGCTCACTTTGATGGGATCACCGT
CGTGGTCAAGTTATCGCGCGGCTCTTAGTGTCGTCCCGTGCGTGATGCCA
GTTTTGTGGGGCTACTCTTGGGTTCTTGTTCTCAACCCCGACGGAACTCT
TATCTGGGTTTCAATACTAAATTCAATATAAAACTTGAAAGTCAGTTCCA
AAAGGGTTAATTTGCTCGTAACGCGACGATAACTGCCGTTGCTTCCGCAG
AGGTTTTGTGCCACGAAATGAGATGCGAAAAACATTGGTACGCAATTGCG
TGACCTCATGAAAATTCACCTGGTATCGGTTTTGACGGTAAGAGAAGAAC
GCCGTCGCGGAAAACGAGAGGATCGAGGATTTCGAGAAAACACACCAGAT
TCAACCTGAGTTCAGAAAATGTGCAGGCTGACGCGGGACGTGACGGCCCC
CAACACGTCTTGCAAGACCTATTTCTCAGGGGCGAACGGGGACAAGTTTT
TCCTGTTGAGCTGACCACAAGGAGGGAACCAAATCCGGTTGATCAATAGT
TTGCTCTATGTCATGAGCACACCGCCATGCTCCGCTGCGATCGTGTGTCC
GTAATGCTTTTGGTGTTTCGGTGTTGCTTGCCTATTAGCTACCTTGGATG
CAAGGGTAACCAGTTCAAGAACAAGCGCGTGCTGATGGAGGCCATCCACA
AGAAGAAGGGAGAGGCCGCCCGTATCAAGGCGCTCAAGGAGCAGGTAAAT
CGTGACACGACCATCGTTATAATGCAAAGTCATGTGATGGCTTTACTTCC
GACTGCCCTGCGGAGGTAGTTGTAGCATGTGCTTTCTCTTGTCGTTTGTC
GAGGGTGACATCGCGAAATGTCAAGGTTGCCGATTTGCATCCACCAACTT
CTATGAATGTGGTGTCCCGGCTCAAAAAGCAGCCTGTATCAATCGACGAA
TCCCACGAAATTATTTGACGAATCCCACAGTGCTAGTGGTCCATTGTGTT
CAAGTACTATTTTTGGTGTTACCGTGGTTACGGCTCGAACTCCTGCATTA
GCCAATTTTGACTGATCTGTTGTGGTAAAATGTCCTCGTGTGTCCGTTGC
CAAACAATCTATAGGCGGAAGCCCGCAAATTCAAGGCGAAGCAGAGGAAT
GAGCGTAAGGAGGACCGCAAGAAGGTGGCCGCCGAGGCGCGTGCTCAGGA
AGCTTCCGCTTGA
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Coding sequence (CDS) from alignment at H-elongata_contig10352:6953..8865-

>mRNA_H-elongata_contig10352.292.1 ID=mRNA_H-elongata_contig10352.292.1|Name=mRNA_H-elongata_contig10352.292.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1008bp|location=Sequence derived from alignment at H-elongata_contig10352:6953..8865- (Himanthalia elongata Himel1 dioecious)
ATCAATCCCCCCACACCGACGCCTATCTCGATACGCGCGGCGTTCCGTAA
TGGTTCGCAGTTGGTCAAGGATGGCCTCGTGATTCGGTTGCCCGCGGTGG
TGCACTCGCGCGCTCGCGTCAACTTGCGCCACGAGGCGAAGAAATCAATC
CCCCCACACCGACGCCTATCTCGATACGCGCGGCGTTCCGTAATGGTTCG
CAGTTGGTCAAGGATGGCCTCGTGATTCGGTTGCCCGCGGTGGTGCACTC
GCGCGCTCGCGTCAACTTGCGCCACGAGGCGAAGAAGAAGGGAAGGCACA
CCGGCCCCGGTAAGCGCAGGGGTACCGCAAACGCGCGGCTCCCCTTCAAG
CTTATCTGGCAGCGCCGCATGCGCATCCTCCGCCGCATGCTCCGCAAGTA
CCGCGAAGCCAAGAAGATCGACAAGCACCTTTACCACGAGCTGAAGGGAA
GGCACACCGGCCCCGGTAAGCGCAGGGGTACCGCAAACGCGCGGCTCCCC
TTCAAGCTTATCTGGCAGCGCCGCATGCGCATCCTCCGCCGCATGCTCCG
CAAGTACCGCGAAGCCAAGAAGATCGACAAGCACCTTTACCACGAGCTCT
ACCTTGGATGCAAGGGTAACCAGTTCAAGAACAAGCGCGTGCTGATGGAG
GCCATCCACAAGAAGAAGGGAGAGGCCGCCCGTATCAAGGCGCTCAAGGA
GCAGCTACCTTGGATGCAAGGGTAACCAGTTCAAGAACAAGCGCGTGCTG
ATGGAGGCCATCCACAAGAAGAAGGGAGAGGCCGCCCGTATCAAGGCGCT
CAAGGAGCAGGCGGAAGCCCGCAAATTCAAGGCGAAGCAGAGGAATGAGC
GTAAGGAGGACCGCAAGAAGGTGGCCGCCGAGGCGCGTGCTCAGGAAGCT
TCCGCTTGAGCGGAAGCCCGCAAATTCAAGGCGAAGCAGAGGAATGAGCG
TAAGGAGGACCGCAAGAAGGTGGCCGCCGAGGCGCGTGCTCAGGAAGCTT
CCGCTTGA
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