prot_H-elongata_contig14113.2849.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig14113.2849.1
Unique Nameprot_H-elongata_contig14113.2849.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length102
Homology
[Close]
BLAST of mRNA_H-elongata_contig14113.2849.1 vs. uniprot
Match: D7FZK0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZK0_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 2.940e-12
Identity = 45/102 (44.12%), Postives = 63/102 (61.76%), Query Frame = 0 
Query:    1 MSCDLEAEVFHREVVKQEQEQLRRRLVAGHEEDIERLRRAIKEKEVDHNNEKIRMRWEHAEELEAERAELEDGGAAKDKLQEIQDMLERERDYHTRELDAER 102
            M+ DL AEVFHRE+VKQE+ Q RR+ +  HE ++  LR  +   ++ HNNEKI+MRWEHA+EL    AE  D    + +L+E + + E +   H   L  ER
Sbjct: 1015 MNHDLLAEVFHREIVKQEEAQKRRKQLEAHEAEVLALRDELHAVQMSHNNEKIKMRWEHADELARVEAEGGDVVGMRQELEEERRLREEDEKRHEAALQKER 1116
[Close]
BLAST of mRNA_H-elongata_contig14113.2849.1 vs. uniprot
Match: A0A6H5JIX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIX2_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 1.930e-11
Identity = 45/102 (44.12%), Postives = 62/102 (60.78%), Query Frame = 0 
Query:    1 MSCDLEAEVFHREVVKQEQEQLRRRLVAGHEEDIERLRRAIKEKEVDHNNEKIRMRWEHAEELEAERAELEDGGAAKDKLQEIQDMLERERDYHTRELDAER 102
            M+ DL AEVFHRE+VKQE+ Q RR+    HE +I  LR  +   ++ HNNEKI+MRWEHA+EL    AE  D    + +L+E + + E +   +   L  ER
Sbjct: 1512 MNHDLLAEVFHREIVKQEEAQKRRKQQEAHEAEILALRNELHAVQMSHNNEKIKMRWEHADELARVEAEGGDVVGMRQELEEERKLREEDERRYEAALQQER 1613
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14113.2849.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZK0_ECTSI2.940e-1244.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JIX2_9PHAE1.930e-1144.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 27..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14113contigH-elongata_contig14113:1288..2286 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14113.2849.1mRNA_H-elongata_contig14113.2849.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig14113 1288..2286 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig14113.2849.1 ID=prot_H-elongata_contig14113.2849.1|Name=mRNA_H-elongata_contig14113.2849.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=102bp
MSCDLEAEVFHREVVKQEQEQLRRRLVAGHEEDIERLRRAIKEKEVDHNN
EKIRMRWEHAEELEAERAELEDGGAAKDKLQEIQDMLERERDYHTRELDA
ER
back to top