mRNA_H-elongata_contig14044.2806.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig14044.2806.1
Unique NamemRNA_H-elongata_contig14044.2806.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig14044.2806.1 vs. uniprot
Match: A0A6H5LCC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCC1_9PHAE)

HSP 1 Score: 253 bits (645), Expect = 3.070e-79
Identity = 146/218 (66.97%), Postives = 176/218 (80.73%), Query Frame = 1 
Query:  220 MSEIKSAASAYQLFQREKHGDVKATLEAKGQRADFGDVQRELSSRWKELTPQNADRARFEGLAAEDRARFQRESAQKDREVDEAQAAKRAARETLMVDSRMRGRPKAPEQQVRPKSMAPPRVISEEERAFRQERQEAKQKEKAERDARLKVAQSQHDSIKNEIAKQASARLQYLLKQSDIFKHFGAGKESAQAEEARKREASV-----AKEVSSPGKR 858
            MSEIK+A SAY L+ +EKH +VKA+LEAKGQ ADFGDV RELSSRWKEL   +ADR +FE LAAEDRARF+RESA KD EV EAQ AKRA RE+L  +SRMRGRPK+ E + + K+M PPR +SEEE+A RQERQ+ K KEKAER+AR ++A++QH SIK+EIAKQASARLQ+LLKQSDIF+HFG GK++ QA EA+K +        A EV+SPGKR
Sbjct:    1 MSEIKAATSAYHLYMKEKHAEVKASLEAKGQTADFGDVMRELSSRWKELGSDDADRVKFESLAAEDRARFERESAAKDLEVAEAQRAKRAERESLTTESRMRGRPKSEEPKPKAKAMGPPRQLSEEEKARRQERQDLKNKEKAERNARTQIAEAQHTSIKDEIAKQASARLQFLLKQSDIFQHFGVGKQATQAGEAKKEKGGASAEAKAGEVTSPGKR 218
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BLAST of mRNA_H-elongata_contig14044.2806.1 vs. uniprot
Match: D7FV68_ECTSI (Probable chromatin remodelling complex ATPase chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV68_ECTSI)

HSP 1 Score: 253 bits (645), Expect = 8.660e-73
Identity = 146/219 (66.67%), Postives = 179/219 (81.74%), Query Frame = 1 
Query:  220 MSEIKSAASAYQLFQREKHGDVKATLEAKGQRADFGDVQRELSSRWKELTPQNADRARFEGLAAEDRARFQRESAQKDREVDEAQAAKRAARETLMVDSRMRGRPKAPEQQVRPKSMAPPRVISEEERAFRQERQEAKQKEKAERDARLKVAQSQHDSIKNEIAKQASARLQYLLKQSDIFKHFGAGKESAQAEEARKREASV-----AKEVSSPGKRR 861
            MSEIK+AASAY L+ +EKH +VKA+LEAKGQ ADFGDV RELSSRWKEL   +ADR +FE LAAEDRARF+RESA KD EV EAQ AKRA RE+L  +SRMRGRPK+ + + + K+M PPR +SEEE+A RQERQ+ K KEKAER+AR ++A++QH SIK+EIAKQASARLQ+LLKQSDIF+HFG GK++ QA EA++ + +      A EV+SPGKRR
Sbjct:    1 MSEIKAAASAYHLYMKEKHAEVKASLEAKGQTADFGDVMRELSSRWKELGSDDADRVKFETLAAEDRARFERESAAKDLEVAEAQRAKRAERESLTTESRMRGRPKSEQPKPKAKAMGPPRQLSEEEKARRQERQDLKNKEKAERNARTQIAEAQHTSIKDEIAKQASARLQFLLKQSDIFQHFGVGKQATQAGEAKQEKGAASAEAKAGEVTSPGKRR 219
[Close]
BLAST of mRNA_H-elongata_contig14044.2806.1 vs. uniprot
Match: A0A7S1XV30_9STRA (Hypothetical protein (Fragment) n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XV30_9STRA)

HSP 1 Score: 106 bits (264), Expect = 5.610e-22
Identity = 82/191 (42.93%), Postives = 114/191 (59.69%), Query Frame = 1 
Query:  214 LAMSEIKSAASAYQLFQREKHGDVKATLEAKGQRADFGDVQRELSSRWKELTPQNADRARFEGLAAEDRARFQRESAQKDREVDEAQAAKRAARETLMVDSRMRGRPKAPEQQVRPKSMAP--PRVISEEERAFRQERQEAKQKEKAERDARLKVAQSQHDSIKNEIAKQASARLQYLLKQSDIFKHFGAG 780
            +A +  + A SAY +FQ E+HG +K + E  G     GDV + ++ RW+ELTP+  ++++FE LAAED+AR++ ESA  D   +EAQA +RA  E  +   R R +    E     K  AP  PRV+S E  A R E++ A++  +AE D         H+  K  IA+QA  RLQYLLKQSDIF+HFG G
Sbjct:    4 VAAAPPRRARSAYAIFQAEEHGRLKESGEGLGG-GGLGDVAKAIAKRWQELTPE--EKSKFEKLAAEDKARYEAESAAADAAAEEAQAKRRADLEADVTGPRKRTQLVPAEA----KRAAPRKPRVVSAEVTAKRAEQRAAREAREAEID-------KAHEENKAFIARQAEQRLQYLLKQSDIFQHFGKG 180
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BLAST of mRNA_H-elongata_contig14044.2806.1 vs. uniprot
Match: A0A835YGX5_9STRA (Putative chromatin remodelling complex ATPase chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGX5_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.160e-20
Identity = 89/205 (43.41%), Postives = 107/205 (52.20%), Query Frame = 1 
Query:  226 EIKSAASAYQLFQREKHGDVKATLEAKGQRADFGDVQRELSSRWKELTPQNADRARFEGLAAEDRARFQRESAQKDREVDEAQAAKRAARETLMVDSRMRGRPKAP----------EQQVRPK---SMAPPRVISEEERAFRQERQEAKQKEKAERDARLKVAQS---QHDSIKNEIAKQASARLQYLLKQSDIFKHFGAGKESA 792
            EIK A +A Q ++R+    V+A LEA+G   D G V RE+++RW  L   +  RA F  LAA+D+ARF  E AQ+D E  E  A  RA RE L+V      R   P          EQQ +P+   S A              ERQE        R AR KV  S   Q  +IK  IA+QA ARLQYLLKQSDIF HFG GKE A
Sbjct:    6 EIKPATTALQFYRRDADKQVRAALEAQGAPTDIGSVSREVNARWAALP--DDQRAGFLALAAQDKARFDDECAQRDAEAAERSARLRAEREELVVSGPRVSRAVLPSGGGGDGSDGEQQRKPRREVSAAEVERXXXXXXXXXXERQET-------RAARDKVEGSIKHQQSAIKAAIAQQAEARLQYLLKQSDIFSHFGIGKEQA 201
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BLAST of mRNA_H-elongata_contig14044.2806.1 vs. uniprot
Match: A0A7R9YFY7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFY7_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 6.030e-16
Identity = 82/212 (38.68%), Postives = 114/212 (53.77%), Query Frame = 1 
Query:  226 EIKSAASAYQLFQREKHGDVKATLEAKGQRADFGDVQRELSSRWKELTPQNADRARFEGLAAEDRARFQRESAQKDREVDEAQAAKRAARETLMVDSRMRGRPKAPEQQVRPKSMAPPRVISEEERAFRQERQEAKQKEKAERDARLKVAQSQHDSIKNEIAKQASARLQYLLKQSDIFKHFGAGKESAQAEEARKREASVAKEVSSPGKRR 861
            E++ A SA+  FQ  +H  +K   +     A   DV R ++ RW+ L+P  AD+  +E  A  DR RF  ESA  D    EAQA +RA RE L V S  R R +A  ++    S+  PR ++  ++A RQ  + A+      RDA ++  + ++ +   E   QAS RLQYLLKQSDIF+HFG G E      A K +A  A E  SP +RR
Sbjct:   20 EVRPAKSAWAFFQAAEHQRMKEG-DPDSASAPLPDVHRLIAERWRNLSP--ADKNIYEEQAKADRDRFDAESAAADAAALEAQARRRAERENLTV-SGSRKRTQAAAKEAPKLSIRKPRELTTAQKAKRQAVRNARNA----RDAHIEKGKEENKAFLQE---QASQRLQYLLKQSDIFQHFGRGAERKSPPRAEKAKAE-ASEPMSPSRRR 219
[Close]
BLAST of mRNA_H-elongata_contig14044.2806.1 vs. uniprot
Match: A0A0W8D9Y4_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D9Y4_PHYNI)

HSP 1 Score: 84.3 bits (207), Expect = 1.480e-14
Identity = 64/182 (35.16%), Postives = 102/182 (56.04%), Query Frame = 1 
Query:  238 AASAYQLFQREKHGDVKATLEAKG----QRADFGDVQRELSSRWKELTPQNADRARFEGLAAEDRARFQRESAQKDREVDEAQAAKRAARETLMVDSRMRGRPKAPEQQVRPKSMAPPRVISEEERAFRQERQEAKQKEKAERDARLKVAQSQHDSIKNEIAKQASARLQYLLKQSDIFKHF 771
            A +AYQ FQ+    DVK  + AK     +  + G + +E+S+RW +L+    DR  F  LAA+D+ R+  E   +D EV+  +A KR      +   R R + +   ++ RPK    PR ++E++   ++ RQE +Q+E  ERD      + Q +++  + ++ ASARL+YLL QSDIF HF
Sbjct:   28 AKTAYQFFQKRVVDDVKRDVAAKAAELNEPVELGSISKEISARWAQLSA--GDREEFVELAAQDKKRYDEECRARDEEVERERARKREEMYGAVEGKRERKKTQVVIEETRPKRQ--PRELTEKQLEAKRLRQEIRQQEIDERDELKAEEKRQKEALAKKKSEIASARLKYLLSQSDIFAHF 205
[Close]
BLAST of mRNA_H-elongata_contig14044.2806.1 vs. uniprot
Match: A0A7S1BX47_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BX47_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.420e-12
Identity = 71/169 (42.01%), Postives = 90/169 (53.25%), Query Frame = 1 
Query:  307 GQRADFGDVQRELSSRWKELTPQNADRARFEGLAAEDRARFQRESAQKDREVDEAQAAKRAARETLMVDSRMRGRPKAP---------EQQVRPKSMAPPRVISEEERAFRQERQEAKQKEKAERDARLKVAQSQHDSIKNEIAKQASARLQYLLKQSDIFKHFGAGKE 786
            G  +  G+V R +S RW  L     +   +   A +DR RFQ E+A++DRE+ E QAA R AR    V    R R KA          E+  RP      R ISEEE A R      K++EKAE+D R+     Q + ++ E A QA  RLQYLLKQSDIF+HFG  KE
Sbjct:    5 GLNSSTGEVTRAVSERWHALDDDGKEH--YHNQAFDDRIRFQTEAAERDREIAERQAAAREARNNFSVSDEPR-RSKARNAYNSNLDYEESKRPIQH---RQISEEELASRN----MKRREKAEKDKRIN---DQKEVLRKERAAQAKKRLQYLLKQSDIFEHFGNVKE 160
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BLAST of mRNA_H-elongata_contig14044.2806.1 vs. uniprot
Match: W4FHL7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FHL7_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 6.180e-12
Identity = 67/188 (35.64%), Postives = 98/188 (52.13%), Query Frame = 1 
Query:  244 SAYQLFQREKHGDVKATLEAKGQR----------ADFGDVQRELSSRWKELTPQNADRARFEGLAAEDRARFQRESAQKDREVDEAQAAKRAARETLMVDSRMRGRPKAPEQQVRPK-SMAPPRVISEEERAFRQERQEAKQKEKAERDARLKVAQSQHDSIKNEIAKQASARLQYLLKQSDIFKHFG 774
            SA+  FQ+     V+  L+ +G            A+ G VQRE+S+RW  LTP+  +R  F   A  DR R+  E   +DR+V+E +  +R  R  L VD + R R    E  V+ K    P + +++E+   +++R E  Q  K  +D      + Q + +K + A  ASARL YLL QSDIFKHFG
Sbjct:   17 SAFAHFQKHITSAVREELKNRGSTDITDVNDTDPANLGAVQREVSARWNNLTPE--EREPFLDAAKVDRERYDEECLLRDRQVEEERERRRQDRYALDVDGK-RERKVTVETIVKEKREKKPAKPLTDEQSETKRKRDEVSQLAKDAKDELRAEEERQKEDLKTKKANAASARLNYLLGQSDIFKHFG 201
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BLAST of mRNA_H-elongata_contig14044.2806.1 vs. uniprot
Match: A0A662XDI8_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XDI8_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 2.060e-11
Identity = 62/180 (34.44%), Postives = 92/180 (51.11%), Query Frame = 1 
Query:  244 SAYQLFQREKHGDVKATLEAK----GQRADFGDVQRELSSRWKELTPQNADRARFEGLAAEDRARFQRESAQKDREVDEAQAAKRAARETLMVDSRMRGRPKAPEQQVRPKSMAPPRVISEEERAFRQERQEAKQKEKAERDARLKVAQSQHDSIKNEIAKQASARLQYLLKQSDIFKHF 771
            SAY LFQ+    DVK  L  +    G+  + G + +E+S+RW +L+    DR  F   AA D+ R+  E   +D EV+  Q  KR      +   R R +P               R +SE++   ++ RQE +Q+E  ERD      + Q D++  + ++ ASARL+YLL QSDIF HF
Sbjct:   36 SAYMLFQKHAMDDVKRDLATRAAERGEAFEPGSISKEMSARWSQLSA--VDREEFVEQAAADKQRYDDECRARDEEVEREQTRKREELYGAVEGKRERKKP---------------RELSEKQLEAKRLRQEIRQQELDERDELKAEERRQKDALAQKKSEIASARLKYLLSQSDIFAHF 198
[Close]
BLAST of mRNA_H-elongata_contig14044.2806.1 vs. uniprot
Match: D0MVY5_PHYIT (Chromatin-remodeling complex ATPase chain, putative n=14 Tax=Phytophthora TaxID=4783 RepID=D0MVY5_PHYIT)

HSP 1 Score: 73.9 bits (180), Expect = 5.000e-11
Identity = 62/182 (34.07%), Postives = 96/182 (52.75%), Query Frame = 1 
Query:  238 AASAYQLFQREKHGDVKATLEAKG----QRADFGDVQRELSSRWKELTPQNADRARFEGLAAEDRARFQRESAQKDREVDEAQAAKRAARETLMVDSRMRGRPKAPEQQVRPKSMAPPRVISEEERAFRQERQEAKQKEKAERDARLKVAQSQHDSIKNEIAKQASARLQYLLKQSDIFKHF 771
            A +AYQ FQ+    DVK  + AK     +  + G + +E+S+RW +L+    DR  F  L   D+ R+  E   +D EV+  +A KR      +   R R       ++ RPK    PR +SE++   ++ R E +Q+E  ERD      + Q +++  + ++ ASARL+YLL QSDIF HF
Sbjct:   28 AKTAYQFFQKRVIDDVKRDVAAKAAELNEPVELGSISKEISARWVQLSA--GDREEFVELGTLDKKRYDEECRARDEEVERERARKREDMYGAVEGKRER-------KKTRPKRQ--PRELSEKQLEAKRLRHEIRQQEIDERDELKAEEKRQKEALAKKKSEIASARLKYLLSQSDIFAHF 198
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14044.2806.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LCC1_9PHAE3.070e-7966.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FV68_ECTSI8.660e-7366.67Probable chromatin remodelling complex ATPase chai... [more]
A0A7S1XV30_9STRA5.610e-2242.93Hypothetical protein (Fragment) n=4 Tax=Phaeomonas... [more]
A0A835YGX5_9STRA1.160e-2043.41Putative chromatin remodelling complex ATPase chai... [more]
A0A7R9YFY7_9STRA6.030e-1638.68Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A0W8D9Y4_PHYNI1.480e-1435.16Uncharacterized protein n=1 Tax=Phytophthora nicot... [more]
A0A7S1BX47_9STRA1.420e-1242.01Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
W4FHL7_9STRA6.180e-1235.64Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A662XDI8_9STRA2.060e-1134.44Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
D0MVY5_PHYIT5.000e-1134.07Chromatin-remodeling complex ATPase chain, putativ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14044contigH-elongata_contig14044:1323..7583 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score256.5
Seed ortholog evalue1.1e-65
Seed eggNOG ortholog2880.D7FV68
KEGG koko:K11654
EggNOG free text desc.helicase activity
EggNOG OGsCOG0553@1,KOG0385@2759
COG Functional cat.KL
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03021,ko03036
Hectar predicted targeting categoryother localisation
Exons7
Model size862
Cds size642
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14044.2806.1prot_H-elongata_contig14044.2806.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig14044 1323..6320 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929834.5383704-CDS-H-elongata_contig14044:1322..14101622929834.5383704-CDS-H-elongata_contig14044:1322..1410Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14044 1323..1410 -
1691679176.6954541-CDS-H-elongata_contig14044:1322..14101691679176.6954541-CDS-H-elongata_contig14044:1322..1410Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14044 1323..1410 -
1622929834.6502948-CDS-H-elongata_contig14044:2090..21461622929834.6502948-CDS-H-elongata_contig14044:2090..2146Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14044 2091..2146 -
1691679176.7120216-CDS-H-elongata_contig14044:2090..21461691679176.7120216-CDS-H-elongata_contig14044:2090..2146Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14044 2091..2146 -
1622929834.6655133-CDS-H-elongata_contig14044:3237..33301622929834.6655133-CDS-H-elongata_contig14044:3237..3330Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14044 3238..3330 -
1691679176.7245092-CDS-H-elongata_contig14044:3237..33301691679176.7245092-CDS-H-elongata_contig14044:3237..3330Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14044 3238..3330 -
1622929834.6810508-CDS-H-elongata_contig14044:4159..43241622929834.6810508-CDS-H-elongata_contig14044:4159..4324Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14044 4160..4324 -
1691679176.734111-CDS-H-elongata_contig14044:4159..43241691679176.734111-CDS-H-elongata_contig14044:4159..4324Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14044 4160..4324 -
1622929834.6953022-CDS-H-elongata_contig14044:4823..49821622929834.6953022-CDS-H-elongata_contig14044:4823..4982Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14044 4824..4982 -
1691679176.7419233-CDS-H-elongata_contig14044:4823..49821691679176.7419233-CDS-H-elongata_contig14044:4823..4982Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14044 4824..4982 -
1622929834.769002-CDS-H-elongata_contig14044:6239..63201622929834.769002-CDS-H-elongata_contig14044:6239..6320Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14044 6240..6320 -
1691679176.7538157-CDS-H-elongata_contig14044:6239..63201691679176.7538157-CDS-H-elongata_contig14044:6239..6320Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14044 6240..6320 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929834.7813675-UTR-H-elongata_contig14044:6320..64011622929834.7813675-UTR-H-elongata_contig14044:6320..6401Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14044 6321..6401 -
1691679176.7632937-UTR-H-elongata_contig14044:6320..64011691679176.7632937-UTR-H-elongata_contig14044:6320..6401Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14044 6321..6401 -
1622929834.7996814-UTR-H-elongata_contig14044:7445..75831622929834.7996814-UTR-H-elongata_contig14044:7445..7583Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14044 7446..7583 -
1691679176.7735424-UTR-H-elongata_contig14044:7445..75831691679176.7735424-UTR-H-elongata_contig14044:7445..7583Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14044 7446..7583 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig14044.2806.1

>prot_H-elongata_contig14044.2806.1 ID=prot_H-elongata_contig14044.2806.1|Name=mRNA_H-elongata_contig14044.2806.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=214bp
MSEIKSAASAYQLFQREKHGDVKATLEAKGQRADFGDVQRELSSRWKELT
PQNADRARFEGLAAEDRARFQRESAQKDREVDEAQAAKRAARETLMVDSR
MRGRPKAPEQQVRPKSMAPPRVISEEERAFRQERQEAKQKEKAERDARLK
VAQSQHDSIKNEIAKQASARLQYLLKQSDIFKHFGAGKESAQAEEARKRE
ASVAKEVSSPGKRR
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mRNA from alignment at H-elongata_contig14044:1323..7583-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig14044.2806.1 ID=mRNA_H-elongata_contig14044.2806.1|Name=mRNA_H-elongata_contig14044.2806.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6261bp|location=Sequence derived from alignment at H-elongata_contig14044:1323..7583- (Himanthalia elongata Himel1 dioecious)
GAAAGAAGTTTGAGCGAAGTTCCTTTGGGGGGTAAACTAAGGACTCTGGT
AGTCATCCGGAGGGCGCTCAAGGGCGAAGATTGATCAAACGAGAATTTTT
CCATTGCGCACGTACAAGAACCACGAGGGAATCTGTGTGTAAGTGTTGGA
GTGAGTCGCGCGTATTTGAGAACCTCGTGTAAGCATTTGTCTATCTCTCT
CTCTCAACTTAAAATATAATTATTTCATTCACCCCCTATATAAGAGTCCT
TCATGGGGCTAGGATTCAATGAGGCTTGGGCTTGGCGGCGTGTGAAGCTT
CGGAGTGGGACTTTCTTCGATAGCTCATTGATTTTCCTTATCATTGTGGT
AGTATCATCCATCCTCAATGTCTGATTCATTTACTCCCTGCGGTAGGTAG
GGACTAGGCTAGAGTAATATCAACCTATTTCAGTCCGTCTCGTCGATGTT
TTGACACTGTTAATATTATGAATAAAACTGAGACATGAGCCCACTTATAC
TCTCCCCGTGCCGCACGCTGAATTTCGGGACCATAATTTTGTGCTGCCTG
ATTCGTTCAGTAGATGGGTCTTTTCCGAGAGCTTGTAGAGAAAAATGAAT
TATTGGTCGACCCGGTGGGTGAACCCATCTCTTGTGAAAATTGAAGCCGC
GGACACCAAAAGCACGGATAGACTCGGTCCCCATGCGGTGGGATGAACAA
GCTTGCATTAGGGGTACGAGAGCACTCATGCTACTGCAGTTGGTTACACT
GCGAAAAAGTGATCAGAACAACAGTCGGGAGATTGTTTCCCTAATTCCTC
AAGAACGCGTCCTCCAAAAAACTAATTAAGAGTACCACAGTTGCTAGTGA
AAAATATTGGACTGTAATGCTGTGTGGTGTGTGATCAACGTACAGTATCC
AGGGGCGCGAAGGTGAAAATGCACCAACCGCTAAACCGCAACGTCGGATC
GCGGGTCCTCAAACGCCTTCCGGACACTGAATGTTTAAGACGGGGCCTCG
CTCTTGGTATAAAAAGTCGAAACGTGGTCCCGTGACTATTGTTCATATGT
ACCAGGTGGCCATGAGCACGTTATCATCTATAATGCGTTTAACACCGCTT
CAGGTGTACTCGTACAGCGCAGCCCGTAAAGATCCCTCTTCCGTAGATTA
CCATGCGCCCCGTTCTTGACTGTCCTTCCCAGAAACTGTTATTCCAGCCG
GCGACTAGAGACGGCTTGGGGTTTCAAGAGCTTGGTGACGGTGCGGCGGT
GACGACGCTCGCAATGAGCGAAATAAAGTCGGCTGCTTCGGCATACCAGC
TTTTCCAGAGAGAAAAGCACGGCGACGTCAAGGCGACCCTCGAGGTGGGA
TTAAAGCGCCAGCTCTTCTAGCTCTCAAGTTATGGAAAATGACAAGCCAA
AAGCGCAATTTGGGCGTAGAGCTATACGTTGTGATGGCGTTTTATGGAGG
TAAACGTTATCGACCCAAAAGTATTTGGTGTATAATTAAAACAAGGGATA
CTGCCTGATCGATGCGAAGAGGCCATCAACAGCTGGCGCAGCTAGGTTGC
AAGCACTTGGGAACTTTCTGTATCTCGATCGTTCGAGGCCAGCGTCCTCT
GTCGTTTGTTGAACATCTTTGTGAGTCTACTTAGAAATCGGTAAGAAGAC
CTCCTCGACCGGTAGAACACCCCATCCTCCCCCCAGTCCTTTTTTTTCAA
TTATACGGGAAAAATGCCCCGGCCAAGGATCGCATGTTCCAATTTCCAAA
ATTACGCCACGGGGTCCAGCGCGAGAGGAGGGTGATACGCATGCCTTCCT
TGCAAGGGCCAGCTAATGAGGAACCTTCACAAACCACTTTTCCTACCTGT
TGTCGACTGGTCATACTGGTCATTTCTTGGGGCAAAACAACGACCGGCTA
GCGATAGCAACAGCAACGGAAGTGTCGCGATGATTCCGTACCCACGCACC
GGCGTCGCAGCACCAAGCCTCCTCACCCAAAGACACAAATATCGATAGGC
GACGAGTCGGCGAACAACTCCATCTTGCTCCTTCTCCTGCAAGCTATTAA
ATGTTGCTGACCGGCTGCCGTTGGTAACAGGAGGTGAACTTGTCCTGGCT
TTCCGAAGCCGTACTCGTTTTTCGTCGATATCCTCAGATAACCGCGCTGT
GTTCAACAGTACCTCTTTTACGACCAGGAAATAATGTCATCGGTGCCCCC
CCCCACGTGGCCCATTGATTATTGCTCAATGATGTTTGCTTATCGGCTCG
CTGTATGATGCTTTCGAATTATTTTAATCCACCATCATCGAAGGGCATGA
TGGGCTGTAGCGGGCCCACGCGTGTATGGCAAGACATAGAAATCGTGTAG
TGACCAACGATCTGAGACATTCTCCTCCCGCTCCTAACATATTTCCAATA
GGCACCCCAGGACGCGAAAGTATCTCGCATATTTTTGAAACATTCGCTCC
GGCGGCAGCACCCCTCGAGGCGTTATTTTTCCCCGTGCTCAACGGGTACG
CGAATATGCGCAACGTACTTGTACGTACACTATTCGCTGACAGCGTTGTC
GAGACATGAAGCATCAAATTGGCCGCTCGTAAACGAAATGATGAATCTCA
GGCGAAGGGCCAAAGAGCCGACTTTGGTGACGTCCAGCGAGAGCTGAGCT
CGAGGTGGAAGGAGCTGACGCCTCAGAATGCCGACCGAGCCAGATTCGAG
GGACTTGCGGCGGAAGATAGGGCTCGCTTCCAGAGGGAGAGCGCCCAAAA
GGATCGAGAGGTGGGTAGGACTGTTTCGAGAACAAGGAGGTGTCGACATG
AATTAGAAGTCTTTTAACTTACTTGAGAAAGGGTGGCAGCCGGAAGACGA
GGCAAACACATCATTTTGTCTCTGTTGCTACTATTAGGGCGTCCCCGAAA
CCGTCAAAGCAAGACAGCCTAGGGTTCACGATCTTTCGGAGGTAGTCCAT
TTTCCGAGGTGTATCACATTTCTGGGACAGCGCGGTGCCACACCCGACCC
TTCGACTTTGTCCTCGAACGTAGAAGCATAAACGTCCTCATTTTGCCTTG
CCGAGTTCTTGATGTCCTTTCCCATACACTTGCAGACAGTAGTGGGGTAG
TGGTGGCATGGTAGCATTTTAAGCGCTTACCAAGAGTAATGTATTTTTTA
ATTTTCCTCAACAAAGTATTGGTCGTGTTCTAATGAATAGTACAATACTT
GAGGCTGGTTGTGCCGAGGGCGGGAGGATTGACGCTTCTTTTTGGGGTTG
TCACCACAGGTGGATGAGGCCCAGGCAGCCAAGCGAGCCGCGCGGGAAAC
GCTGATGGTAGACAGTCGAATGCGCGGGCGGCCCAAGGCGCCGGAACAGC
AAGTCAGGCCCAAGTCGATGGCTCCCCCCAGAGTGATTTCGGAGGAGGAG
AGGGCTTTCAGACAGGAGAGGCAGGTGAGAGGCCACTATAATATTATTAG
TAGAAAAAGTACTAATCGAATGCTGGAAGACTGGGATGCTACAAGGCCTG
GGTAGTACAAGTGATTGCTAAGGCGATTGACCACTTTTACAACATCCTAA
GTATAACTTCTGAAAAACAAACACTACTCCTGTATTATTAATTGTTGTCG
GAAAAAACCGACGAGAAGCGTGATAAAGGAGGATAAGAACGTGGCTTAGG
TGGCGGCTTTAGTTTAAACTTGCATCGCGATAAAAAGTTCGTATTGTAAT
ATTAGTAGAAAGGCATGAGCCATAAGGAGGTGAGTGGGTGGATCCCTTAA
TAAAAATAATATGTTGTTGGATGGCTGACCCCATTGGCAACAGCTTGAGC
TTGTCGAAAAATGTGGCTGGCTGGCTGGCTATCCTCCCAGTGCCCAGCGT
GGGGGAGCGCATTCGATGAAGGCGTTCTTATTTATGTGCATCATGTGTCC
TGCTGGTGATTTGCAGTCGTTACAACGCCATATCTGTTTCAGGATATAAT
GTACCCCTGCCCACAACACTTTTAATTATAAAAGACTTTGGGCTCATTCC
AACTCTCCGAACATCCACGCCTTCTTGGCACCATAAGAGGTGCAGTCCAG
GGGACCAACCATCGGGAAGTAGGAATAAGCATAAGAAATGGTAATATAAT
GATGTTAATGTTGGTGTTACTAATAACTGTATTCGAAACACTTTTATTCT
GTGAGACACTGTAGGGTACTATGATTTAATGTACTAGACTGAACTGTTAT
GTACCGGTACTGTTTTTTGCCAACTTTGTTGAAATGAAACGAAACGCGCG
TAGGAGGCGAAGCAGAAAGAGAAAGCAGAGAGAGACGCCAGATTGAAAGT
GGCGCAGTCGCAGCACGATTCCATCAAGAACGAGATCGCCAAGCAGGTGC
GGGAGACCACGGAACGGCGCGCGTCTTTTGCGATCCCGCACCGTTTGTGC
CGTACACGACATCGCTCGTTCCGTTTGGCTGTGCCTCACTTGGCGTCGTT
CGAGACTGTCATTGCTATTGCTATTGTCATACTGTGTAACTCATACCCTT
GCTGTCGAAGCTAACGTTATGATTTCTCTGGCGACTATTAATACTTCTCG
CAGGGAGTGAGGTGAGGTGAGGTGAGGTGGGGTGGGGTGGGGTGGGGTTA
GGTGGGGTGGGGTTAGGTGGGGTGGGGTGGGGTTAGGCCAGGGAGTGCAA
CAATGAAGGATACGAAACCTTACCCCCCTCCCTCTTACCTGCCGTCCTAT
TTCCTCAGCATATATATATATATATATATACAGGTGTAGAAATTAATTTA
TTTTAACTTGAGTTTGGAAAAAAATGCGACGAGGGCGAGGTATTTTCAAT
ACGAGTTGTTTTATTTTCACTTCCCGCCTTGGCATTTGTAAAAAAAACGT
CAGGGGATAATTGGTCAATCCCTGGGACGTATTACAATTCACTTTGTAAG
CTGAGAACGTGTTTTGTGTGTCAACCCTATTCGCCGATTAATCACTTGGC
AGCATCCTCCCCCCTGATCACAGAATCCCTCCTCCTGTAGCTGTTGCCCT
ATACTATATGTGAAACGGTTCGCTTCTGTCTCACGTGGTATGGTATCGTG
GGACGTTGAAGGAAGACGAGTCGCGGGGGGGGAAGGCATGCTCCTAAGTA
TCGGTAATAAGAAGTGTGTCCGTGCGCGTACCCGTTGAGCTTGGAAATTA
TACCTGGAATAATACCCAGAAGCATATCTCTCCCGCGACTGTAATTTTAT
TCCTTCTGCTGTAACGCCGCATCGTAAAAAACGGGTGGGTGGGTGGGTGT
GACTTGGGTTTTTGTTTGTTTTTGTTTGATCGTTTTTGTGCCTGTAGTTG
TCAGAGCGAGAGGTTTGACCCCACTGGGCTAACGTTTCCAGCGCGCGTGT
AAGCCGCGTAGTTTTAATATTTGTATATGTCCTCGATAACGACCGCTTGT
TCTCCTTCTCGGTTGTGCAATGCCCGGTCACCTTTAGGCGTCGGCACGTC
TCCAGTACTTACTGAAGCAGAGCGATATCTTCAAGCACTTCGGGTGAGCC
CTCGTCCCGTTAGCGTGCGTCTATTTCACTTGACCTTGATCTTGACTTGA
TTTTGAGTTGACTTGGCCTTGATCAACTTGCTCTTGACTTGGCCTTGATC
TTGACTTGATCTTGACTTGATATTGATCATGGCTTGGCCTTGACTTCACT
TGATCTTGACTTGATATTGATCATGGCTTGGCCTTGACTTCACTTGATCT
TGATCTTGTCTTGGCCTTGACTTGATTTGATCTTGATTTGATCTTGATCT
TGATTTGACCTTGATCTTTAAAACCGGGTTCGAGTTTGTTAGGACAAAAA
CGCACGAGAACGTGTCCTCGTTGAGCGGAGGGCGCCAGTTAGGAAAAAAA
CCTTCCCTGTGAGAGAAGATCGGGTTGGGATGGGTTGGGCTCTCGCTAGA
TGTGCCGCTAACGCCGCATCTCTTGTCTGGCCAGGCGTGGTAAAAAAGAG
GCCCCTAGGCAACAACCTAATGTTTTCTTTTGATTTTTGTAAGAAAGCGT
GCATGCGAGTCGCTCGCTACCCTCGCCATCCCCAAGACACGGTCCCACTC
ATTACATGACAACATGACATGACAGTACAGTACAACAGTACAGAGCAACA
ACGTGTATGCCATCCCCGCTTCCCCCCCCGCCGTGTTTATCGCCTAACGA
TGTCGGGTGACGTTGTACAAAAGGGCCGGCAAGGAGTCGGCACAGGCGGA
AGAGGCACGCAAACGGGAGGCCAGCGTAGCGAAGGAGGTATCCAGCCCTG
GCAAGCGTAGG
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Coding sequence (CDS) from alignment at H-elongata_contig14044:1323..7583-

>mRNA_H-elongata_contig14044.2806.1 ID=mRNA_H-elongata_contig14044.2806.1|Name=mRNA_H-elongata_contig14044.2806.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1284bp|location=Sequence derived from alignment at H-elongata_contig14044:1323..7583- (Himanthalia elongata Himel1 dioecious)
ATGAGCGAAATAAAGTCGGCTGCTTCGGCATACCAGCTTTTCCAGAGAGA
AAAGCACGGCGACGTCAAGGCGACCCTCGAGATGAGCGAAATAAAGTCGG
CTGCTTCGGCATACCAGCTTTTCCAGAGAGAAAAGCACGGCGACGTCAAG
GCGACCCTCGAGGCGAAGGGCCAAAGAGCCGACTTTGGTGACGTCCAGCG
AGAGCTGAGCTCGAGGTGGAAGGAGCTGACGCCTCAGAATGCCGACCGAG
CCAGATTCGAGGGACTTGCGGCGGAAGATAGGGCTCGCTTCCAGAGGGAG
AGCGCCCAAAAGGATCGAGAGGCGAAGGGCCAAAGAGCCGACTTTGGTGA
CGTCCAGCGAGAGCTGAGCTCGAGGTGGAAGGAGCTGACGCCTCAGAATG
CCGACCGAGCCAGATTCGAGGGACTTGCGGCGGAAGATAGGGCTCGCTTC
CAGAGGGAGAGCGCCCAAAAGGATCGAGAGGTGGATGAGGCCCAGGCAGC
CAAGCGAGCCGCGCGGGAAACGCTGATGGTAGACAGTCGAATGCGCGGGC
GGCCCAAGGCGCCGGAACAGCAAGTCAGGCCCAAGTCGATGGCTCCCCCC
AGAGTGATTTCGGAGGAGGAGAGGGCTTTCAGACAGGAGAGGCAGGTGGA
TGAGGCCCAGGCAGCCAAGCGAGCCGCGCGGGAAACGCTGATGGTAGACA
GTCGAATGCGCGGGCGGCCCAAGGCGCCGGAACAGCAAGTCAGGCCCAAG
TCGATGGCTCCCCCCAGAGTGATTTCGGAGGAGGAGAGGGCTTTCAGACA
GGAGAGGCAGGAGGCGAAGCAGAAAGAGAAAGCAGAGAGAGACGCCAGAT
TGAAAGTGGCGCAGTCGCAGCACGATTCCATCAAGAACGAGATCGCCAAG
CAGGAGGCGAAGCAGAAAGAGAAAGCAGAGAGAGACGCCAGATTGAAAGT
GGCGCAGTCGCAGCACGATTCCATCAAGAACGAGATCGCCAAGCAGGCGT
CGGCACGTCTCCAGTACTTACTGAAGCAGAGCGATATCTTCAAGCACTTC
GGGCGTCGGCACGTCTCCAGTACTTACTGAAGCAGAGCGATATCTTCAAG
CACTTCGGGGCCGGCAAGGAGTCGGCACAGGCGGAAGAGGCACGCAAACG
GGAGGCCAGCGTAGCGAAGGAGGTATCCAGCCCTGGCAAGCGTAGGGGCC
GGCAAGGAGTCGGCACAGGCGGAAGAGGCACGCAAACGGGAGGCCAGCGT
AGCGAAGGAGGTATCCAGCCCTGGCAAGCGTAGG
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