mRNA_H-elongata_contig14031.2801.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig14031.2801.1 vs. uniprot
Match: A0A836CG63_9STRA (Calcium-dependent protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG63_9STRA) HSP 1 Score: 258 bits (660), Expect = 3.430e-78 Identity = 150/324 (46.30%), Postives = 190/324 (58.64%), Query Frame = 1
Query: 1 KIIDFGLSRFEDMQSAMTTRVGTPYYIAPE---------------------------------------------------------------------KDPSARMTATQAINHRWFETPPGKKTVGGXXXXXXXXXXXXXXXXXXXSEDKRDKINMQVSMQRINHRLKRFVGMSKLKKVALNVIAQQLTEADIGHLRGVFERLDVEGNGVISVTELEQVVRQEGLECMQEDVVRLLQGIDIDGSNSLNYREFLAATMERNIFIREKNIRCAFDYFDLDGNSEITLANLVKIFGAEEHAREIMGDVNLSGEGVISYDEFKSMMM 765
KIIDFGLSRFE+ SAMTTRVGTPYYIAPE DP+ R+TA QA++H WFE ++ V++QRIN+RL+RFVGM KLKKVALNVIAQQLTEA IGHLR VFE LD +GNGVISV EL+++V +EGLE ++V LL+G+DIDGSN+L+YREFLAATM+R++F+RE+N+R F YFDL+G +IT+ NL+KIFG+EEHAREIMGDV+++ +GVI Y+EF+ MM+
Sbjct: 183 KIIDFGLSRFEEANSAMTTRVGTPYYIAPEVLLRSYDKACDLWSIGVITYILLSGYPPFYGDTDAEIFASVRRGEFDFPSPEWDSVSADAKDFICSLLRMDPTERLTAPQALDHPWFEK-------------------AEEAADSAAPAPSLEEALSDVTLQRINYRLRRFVGMGKLKKVALNVIAQQLTEAQIGHLRDVFEALDADGNGVISVEELKKIVIEEGLE---DEVAYLLRGVDIDGSNTLDYREFLAATMDRSVFVREENMRSGFAYFDLEGAGKITVDNLIKIFGSEEHAREIMGDVDINSDGVIEYEEFRQMML 484
BLAST of mRNA_H-elongata_contig14031.2801.1 vs. uniprot
Match: A0A6H5JZZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ8_9PHAE) HSP 1 Score: 249 bits (635), Expect = 3.340e-74 Identity = 157/328 (47.87%), Postives = 183/328 (55.79%), Query Frame = 1
Query: 34 DMQSAMTTRVGTPYYIAPE---------------------------------------------------------------------KDPSARMTATQAINHRWFETPPGKKTVGGXXXXXXXXXXXXXXXXXXXSEDKRDKINMQVSMQRINHRLKRFVGMSKLKKVALNVIAQQLTEADIGHLRGVFERLDVEGNGVISVTELEQVVRQEGL--ECMQEDVVRLLQGIDIDGSNSLNYREFLAATMERNIFIREKNIRCAFDYFDLDGNSE--ITLANLVKIFGAEEHAREIMGDVNLSGEGVISYDEFKSMMMEMPLDSRDPLT 798
++++AMTTRVGTPYYIAPE KDP+ARM+ATQ+INH WFE+ G D + N QV++QRINHRL+RFV MSKLKKVALNVIAQQLTEA+IGHLRGVFE LD + GVI EL+QVV+Q+G+ E QEDV++LLQGIDIDGSNSLNYREFLAATME + ITL NLVKIFGAEEHAREIMGDVNLSGEG I+YDEFK+MMM+MPLD R+ +T
Sbjct: 195 EIKTAMTTRVGTPYYIAPEVLSRKYDKACDLWSIGVITYILLAGYPPFYGESDQEIFASVRHGYFDFPSPEWDNISTEAKDFITQLLQKDPAARMSATQSINHGWFESHSGGALANAVAAAGGG--------------DSSVQGNEQVNLQRINHRLRRFVRMSKLKKVALNVIAQQLTEAEIGHLRGVFELLDTQNKGVIGPDELQQVVQQDGMVVENAQEDVMQLLQGIDIDGSNSLNYREFLAATMEARTSSSGSRTSAVLSTTSTSTVTRRCITLQNLVKIFGAEEHAREIMGDVNLSGEGAINYDEFKTMMMDMPLDGREQMT 508
BLAST of mRNA_H-elongata_contig14031.2801.1 vs. uniprot
Match: A0A6H5L236_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L236_9PHAE) HSP 1 Score: 221 bits (564), Expect = 1.250e-63 Identity = 145/327 (44.34%), Postives = 190/327 (58.10%), Query Frame = 1
Query: 1 KIIDFGLSRFEDMQSAMTTRVGTPYYIAPEK---------------------------------------------------------------------DPSARMTATQAINHRWF----ETPPGKKTVGGXXXXXXXXXXXXXXXXXXXSEDKRDKINMQVSMQRINHRLKRFVGMSKLKKVALNVIAQQLTEADIGHLRGVFERLDVEGNGVISVTELEQVVRQEGLECMQEDVVRLLQGIDIDGSNSLNYREFLAATMERNIFIREKNIRCAFDYFDLDGNSEITLANLVKIFGAEEHAREIMGDVNLSGEGVISYDEFKSMM 762
KIIDFGLSRFE+ MTTRVGTPYYIAPE DP+ R TA++A+ W + TV G XXXXXXXXXX + + DK +QVS RL+RF GMS LK+ ALNVIA QLTEADIGHLR F +D + NG I V EL+ VV++EGLE ++E+V+ +L+G+D+DG++S+ ++EFLAAT++RN+FIRE N+R AF +FD++G+ ITLANLV IFG+E+HAREI+GD++L G+G IS+DEF+ MM
Sbjct: 180 KIIDFGLSRFEETNQIMTTRVGTPYYIAPEVLGRSYNKACDLWSIGVIAYILLCGYPPFYGRTDKDIFASVSRGQYDFPGPEWDTVSDDAKAFVGKLLMLDPAERPTASEALTLPWLHVLDDEAAESATVEGEPGVATTXXXXXXXXXXVAA--RMDK-PLQVSS-----RLRRFTGMSNLKRAALNVIANQLTEADIGHLRDAFREIDADNNGSICVDELKMVVKKEGLEYIEEEVMTMLRGVDLDGNDSIEWKEFLAATIDRNVFIREDNVRRAFQHFDIEGSGSITLANLVSIFGSEDHAREIVGDIDLDGDGEISFDEFRQMM 498
BLAST of mRNA_H-elongata_contig14031.2801.1 vs. uniprot
Match: A0A835ZG53_9STRA (Calcium-dependent protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG53_9STRA) HSP 1 Score: 210 bits (535), Expect = 8.640e-60 Identity = 123/323 (38.08%), Postives = 174/323 (53.87%), Query Frame = 1
Query: 1 KIIDFGLSRFEDMQSAMTTRVGTPYYIAPE---------------------------------------------------------------------KDPSARMTATQAINHRWFETPPGKKTVGGXXXXXXXXXXXXXXXXXXXSEDKRDKINMQVSMQRINHRLKRFVGMSKLKKVALNVIAQQLTEADIGHLRGVFERLDVEGNGVISVTELEQVVRQEGLECMQEDVVRLLQGIDIDGSNSLNYREFLAATMERNIFIREKNIRCAFDYFDLDGNSEITLANLVKIFGAEEHAREIMGDVNLSGEGVISYDEFKSMM 762
KIIDFGLSRFED + MTTRVGTPYYIAPE KD R+TA+QA+ H WFE T N++V+MQ +NHRLKRFVG + +KK+ALN+IA L E D+GHL +F +D++GNGVI+ EL++VV EGL +Q +V+ LL+GID+DGS +L++REFLAA+M+R IF+RE N+R AF++FD +++ +L++ FG++E A +I+GDV++ +GVI+++EF+ MM
Sbjct: 188 KIIDFGLSRFEDQATHMTTRVGTPYYIAPEVLEKKYDSACDLWSIGVITYILLCGYPPFYGDNDVEIFKAIQRGTFRFLSPEWDSISVEAKDLIQRLLEKDCRRRLTASQALVHPWFEKVMDTATTAA---------------------------NLRVNMQHMNHRLKRFVGANNMKKLALNIIASNLAEEDVGHLHKIFHSIDIDGNGVITTEELQRVVAAEGLINLQAEVISLLEGIDMDGSKTLDWREFLAASMDRAIFLRECNMRKAFEHFDHQRKGHVSMEDLLRCFGSQEEALKILGDVDIDKDGVITFEEFQIMM 483
BLAST of mRNA_H-elongata_contig14031.2801.1 vs. uniprot
Match: A0A6V1S6L4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S6L4_HETAK) HSP 1 Score: 206 bits (523), Expect = 6.620e-58 Identity = 131/327 (40.06%), Postives = 169/327 (51.68%), Query Frame = 1
Query: 1 KIIDFGLSRFEDM--QSAMTTRVGTPYYIAPE---------------------------------------------------------------------KDPSARMTATQAINHRWFETPPGKKTVGGXXXXXXXXXXXXXXXXXXXSEDKRDKINMQVSMQRINHRLKRFVGMSKLKKVALNVIAQQLTEADIGHLRGVFERLDVEGNGVISVTELEQVVRQEGLECMQEDVVRLLQGIDIDGSNSLNYREFLAATMERNIFIREKNIRCAFDYFDLDGNSEITLANLVKIFGAEEHAREIMGDVNLSGEGVISYDEFKSMMME 768
KIIDFGLSR EDM Q MTTRVGTPYYIAPE K P R TA QA+ WFE + R I + M+ RLK+FVGM+KLK+ ALN+IA QLTEA+IGHLR VF +D +GNGVI++ EL +R EG+E M+ +V+ L+QGID+DG+ SL+Y+EFLAA ++RN+FIRE+NIR AF YFD G I A+LV IFG+ +HA E + ++L+G+GVI Y+EFK M+ +
Sbjct: 201 KIIDFGLSRVEDMGKQGVMTTRVGTPYYIAPEVLGRHYTKACDLWSIGVIMYILLCGYPPFYGDNDTEIFSSVQRAQFYFPSPEWDAISEEAKNLIKQLLSKRPEDRPTAEQALADPWFEKVDDDPAL-------------------------RAPIRIAAFMR---DRLKQFVGMNKLKRHALNIIANQLTEAEIGHLRKVFSAIDDDGNGVITLEELRMAMRMEGMEAMEAEVMGLMQGIDLDGNESLDYQEFLAAVVDRNVFIREENIRVAFQYFDKQGRGHIQPADLVDIFGSVQHAEEAVRGIDLNGDGVIEYEEFKQMIKD 499
BLAST of mRNA_H-elongata_contig14031.2801.1 vs. uniprot
Match: W7T8G8_9STRA (Calcium-dependent protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T8G8_9STRA) HSP 1 Score: 206 bits (523), Expect = 2.460e-57 Identity = 120/323 (37.15%), Postives = 170/323 (52.63%), Query Frame = 1
Query: 1 KIIDFGLSRFEDMQSAMTTRVGTPYYIAPE---------------------------------------------------------------------KDPSARMTATQAINHRWFETPPGKKTVGGXXXXXXXXXXXXXXXXXXXSEDKRDKINMQVSMQRINHRLKRFVGMSKLKKVALNVIAQQLTEADIGHLRGVFERLDVEGNGVISVTELEQVVRQEGLECMQEDVVRLLQGIDIDGSNSLNYREFLAATMERNIFIREKNIRCAFDYFDLDGNSEITLANLVKIFGAEEHAREIMGDVNLSGEGVISYDEFKSMM 762
KIIDFGLSRFED Q MTTRVGTPYYIAPE KDP R +A A+NH WF+ K+D Q + + + L+RF+GM+KLK+VAL +IA+Q+ EAD+ H++ FE LD +GVI+V EL+Q QEGL ++E V RL+ G+D++ + +++Y EFLAATMER++++R+++IR AF +FD D + IT+ +LV+ G EE+ARE++GD++ +G+GVIS DEFK+MM
Sbjct: 258 KIIDFGLSRFEDDQKYMTTRVGTPYYIAPEVLNRMYDKSCDLWSIGVIMYILLCGYPPFYGDTDADIFASVRRAEFTFPSPEWDDISPSAKDLIRKLLSKDPRKRPSAAAALNHEWFQVL------------------------------KKDGEITQALTEHLRNSLRRFIGMNKLKRVALTIIAEQVAEADVAHVQKAFEALDTNKDGVITVAELQQAAEQEGLTNVKEQVARLMHGVDVNENTAIDYNEFLAATMERSVYVRDEHIRRAFQHFDQDMDGHITVQDLVEALGTEENAREVLGDIDRNGDGVISLDEFKNMM 550
BLAST of mRNA_H-elongata_contig14031.2801.1 vs. uniprot
Match: D8LJD5_ECTSI (Calcium-dependent protein kinase, isoform 2 (CDPK 2) Protein kinase domain containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJD5_ECTSI) HSP 1 Score: 194 bits (493), Expect = 7.870e-54 Identity = 125/326 (38.34%), Postives = 167/326 (51.23%), Query Frame = 1
Query: 1 KIIDFGLSRFEDMQSAMTTRVGTPYYIAPE---------------------------------------------------------------------KDPSARMTATQAINHRWFETPPGKKTVGGXXXXXXXXXXXXXXXXXXXSEDKRDKINMQVSMQRINHRLKRFVGMSKLKKVALNVIAQQLTEADIGHLRGVFERLDVEGNGVISVTELEQVVRQEGLECMQEDVVRLLQGIDIDGSNSLNYREFLAATMERNIFIREKNIRCAFDYFDLDGNSEITLANLVKIFGAEEHAREIMGDVNLSGEGVISYDEFKSMMMEM 771
KIIDFGLSRFED AMTTRVGTPYYIAPE KDP+AR+TA+QA+ H WFE K + G ++ RD S R+NHRL+RF G + LKK+ALNVIA+ + AD GHLR VF LD+ G+G I+V EL+QV+ EG+ MQ +V+ LL +D L+YR FLAATME+ IF+R +N+R AFD+FDL G I ++L++ G+E+ AR ++ D+++ +G IS+DEF MM +
Sbjct: 174 KIIDFGLSRFEDGSEAMTTRVGTPYYIAPEVLSKKYDKACDLWSIGVIMFILLCGYPPFHGANDAEIFKAVQRVDYRFLSPEWDSVSDDAKDLIRKLLVKDPTARLTASQALVHPWFE-----KVMSGDAA----------------AQTLRD------SALRLNHRLRRFAGANALKKIALNVIAEDVGGADEGHLRKVFNSLDLNGDGEITVDELQQVIASEGMVGMQAEVLELLNSMD----KKLDYRNFLAATMEKGIFLRRENLRKAFDHFDLQGTGSINKSDLMEALGSEDCARTMLEDIDMDHDGQISFDEFSEMMRRL 468
BLAST of mRNA_H-elongata_contig14031.2801.1 vs. uniprot
Match: D8LI14_ECTSI (Calcium-dependent protein kinase, isoform 2 (CDPK 2) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI14_ECTSI) HSP 1 Score: 179 bits (455), Expect = 7.040e-49 Identity = 116/275 (42.18%), Postives = 150/275 (54.55%), Query Frame = 1
Query: 1 KIIDFGLSRFEDMQSAMTTRVGTPYYIAPEKDPSARMTATQAINHRWFETPPGKKTVGGXXXXXXXXXXXXXXXXXXXSEDKRDKINMQVSMQRINHRLKRFVGMSKLKKVALNVIAQQLTEADIGHLRGVFERLDVEGNGVISVTELEQVVRQE-GLECMQEDVV-----------------RLLQGIDIDGS---NSLNYREFLAATMERNIFIREKNIRCAFDYFDLDGNSEITLANLVKIFGAEEHAREIMGDVNLSGEGVISYDEFKSMM 762
KIIDFGLSRFE+ MTTRVGTPY + T P K ++G M +Q ++ RL+RF GMS LK+ ALNVIA QLTEADIGHLR F +D + NG I V EL+ VV++E G + + V RLL I + +EFLAAT++RN+FIRE N+R AF +FD++G+ ITLANLV IFG+E+HAREI+GD++L G+G IS+DEF+ MM
Sbjct: 148 KIIDFGLSRFEETDQIMTTRVGTPYCV---------------------HTMPSKCSLG----------------------------PMDKPLQ-LSSRLRRFTGMSNLKRAALNVIANQLTEADIGHLRDAFREIDADNNGSICVDELKMVVKKEVGRDAWRARGVLEPWTAPSSKAVTGYKSRLLMSIQLSVMCVPMQCTAQEFLAATIDRNVFIREDNVRRAFQHFDIEGSGSITLANLVSIFGSEDHAREIVGDIDLDGDGEISFDEFRQMM 372
BLAST of mRNA_H-elongata_contig14031.2801.1 vs. uniprot
Match: A0A812UKM4_SYMMI (Calmodulin (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UKM4_SYMMI) HSP 1 Score: 171 bits (434), Expect = 4.630e-46 Identity = 106/323 (32.82%), Postives = 162/323 (50.15%), Query Frame = 1
Query: 1 KIIDFGLSRFEDMQSAMTTRVGTPYYIAPEK---------------------------------------------------------------------DPSARMTATQAINHRWFETPPGKKTVGGXXXXXXXXXXXXXXXXXXXSEDKRDKINMQVSMQRINHRLKRFVGMSKLKKVALNVIAQQLTEADIGHLRGVFERLDVEGNGVISVTELEQVVRQEGLECMQEDVVRLLQGIDIDGSNSLNYREFLAATMERNIFIREKNIRCAFDYFDLDGNSEITLANLVKIFGAEEHAREIMGDVNLSGEGVISYDEFKSMM 762
KIIDFGLSR++D M+T+VGTPYYIAPE D S R TA +A+ H WF T + +V +M I L+RF+ M+KLK+ AL VIA+QLTE ++ LR F+ +D+ +G ++ TE++ + ++G + +++++ +L++G+ ++ SN + Y EFLAATM+ N IRE+NI AF FD +G+ +T+ +LV I G+EEHARE+ G+++L+G+GVISY+EFK+MM
Sbjct: 63 KIIDFGLSRYDDEIEHMSTKVGTPYYIAPEVLTRKYDKECDLWSIGVVTYVLLCGYPPFYGDTDAEIFASVKRGEFDFPSPDWDDISTQAKHFIRACLKIDASKRPTAREALEHPWF-TAVAQHSV-------------------------------PHTMHSIKGSLERFINMNKLKRAALQVIAEQLTETELHGLRATFDAMDLNRDGKLTYTEIQTALEEQGFDMLKDELRQLMEGLGVESSNEIQYAEFLAATMDMNHAIREENILRAFQQFDQNGSGSLTIPDLVAIMGSEEHAREVAGEIDLNGDGVISYEEFKAMM 353
BLAST of mRNA_H-elongata_contig14031.2801.1 vs. uniprot
Match: A0A7S4D8Z4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8Z4_HETAK) HSP 1 Score: 171 bits (432), Expect = 8.460e-46 Identity = 88/232 (37.93%), Postives = 142/232 (61.21%), Query Frame = 1
Query: 94 DPSARMTATQAINHRWFETPPGKKTVGGXXXXXXXXXXXXXXXXXXXSEDKRDKINMQVSMQRINHRLKRFVGMSKLKKVALNVIAQQLTEADIGHLRGVFERLDVEGNGVISVTELEQVVRQEGLECMQEDVVRLLQGIDIDGSNSLNYREFLAATMERNIFIREKNIRCAFDYFDLDGNSEITLANLVKIFGAEEHAREIMGDVNLSGEGVISYDEFKSMMMEMPLDSRD 789
DP R++A QA+ H WFE G+ VG + V+ + + RL+++ + +LKK A+ VIAQ+LTE +I HLR +F ++D +G+G +++ E+ +R GLE + + +++G+DIDG+N++++ EFLAA ++RN+FIRE+NI+ AF++FD G I LV IFG+ EHARE +G++++ G G I YDEFK MM+++ L S +
Sbjct: 117 DPQERISAEQALQHPWFEQSAGRGRVG--------------------------SVGGLVTWRYMRDRLQQYAQLGRLKKHAMTVIAQRLTEREIWHLRKIFTQIDTDGSGTLTIDEVWDSMRAAGLEYEEREARTMMKGMDIDGNNAIDWEEFLAAVVDRNVFIREENIQIAFNHFDTAGRGAIRPQELVAIFGSLEHAREAVGEIDIDGNGSIEYDEFKEMMLQVNLASAE 322 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14031.2801.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig14031.2801.1 >prot_H-elongata_contig14031.2801.1 ID=prot_H-elongata_contig14031.2801.1|Name=mRNA_H-elongata_contig14031.2801.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=267bp MQSAMTTRVGTPYYIAPEKDPSARMTATQAINHRWFETPPGKKTVGGSADback to top mRNA from alignment at H-elongata_contig14031:2..5842- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig14031.2801.1 ID=mRNA_H-elongata_contig14031.2801.1|Name=mRNA_H-elongata_contig14031.2801.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5841bp|location=Sequence derived from alignment at H-elongata_contig14031:2..5842- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig14031:2..5842- >mRNA_H-elongata_contig14031.2801.1 ID=mRNA_H-elongata_contig14031.2801.1|Name=mRNA_H-elongata_contig14031.2801.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1602bp|location=Sequence derived from alignment at H-elongata_contig14031:2..5842- (Himanthalia elongata Himel1 dioecious)back to top |