prot_H-elongata_contig13986.2775.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13986.2775.1
Unique Nameprot_H-elongata_contig13986.2775.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length373
Homology
BLAST of mRNA_H-elongata_contig13986.2775.1 vs. uniprot
Match: A0A6H5L4T8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4T8_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 5.930e-19
Identity = 122/398 (30.65%), Postives = 169/398 (42.46%), Query Frame = 0
Query:    6 RFEVERLKTRRQVVNLLEDAEAIEAATLR------AAKTNQSRKDDQNSA----NAYKEPNGRTRRARGANRVSDVRRDGG-------ESNAFVEP-QPGEDPNFIGTEKMRFMKYAYKHVDSHKAFERRRNAGTKRADEDRYDELCKQGFPS-GVVNLEVTPKYADGSPTLSTTRATSGVGEVQGKHNRGIWREGEALASPRRCGRRRLLRQKQGILMDLKGVISRQAEALGRLAEGYHDPCGQVANRPGRNDTINKQRNPGIRGAHYDTDNCRIT-NKRTSSNGTRSYKGDSRMQNTAKVSRSTAESSNVTSRLR-------TQPQDNATSTFLSLGGRWGGHMGAGISKRRS-------EATSASYATYCNERRRNGDTGYRTGKRRWAVPLLPI 369
            RF  ER + +  +  L++DA A+EAA L+         T+ +R D   +A    NA  E  G    A GA     V    G       +SNA++EP  P +D NFI  ++MRFMKY Y H++     +      T    E++   +                                   G V G     +  +G           R+LL +K+GIL+++KGV++RQAEAL RL +   +    VA    R       R      A   T +   T N  TS   TRS    S    ++ + +S A   +  +R +       T PQDN TS FL+ GGRWGG      S+RRS        A+SASYATYC   R  G  G   G+R  AVP LP+
Sbjct:   49 RFIAERRQDQAHISELVQDANAVEAALLKEQQPLQGGNTSLARDDPCAAASRAYNAPSEGGGDAGGAAGAVDTGGVEGSVGVRRILSTKSNAYMEPADPKDDSNFISLDQMRFMKYMYSHIEGQNGAKAHTRLTTNVVREEKQIAVKPNAHKQRXXXXXXXXXXXXXXXXXXXXXXXXXXAGPVAGSSAPPLLSKGGEGGRNSGSRERQLLERKRGILLEMKGVVNRQAEALDRLVQSSAN--ANVAGNGRRRGGDRNSRKSRPSQASVSTSSSLFTPNGATSGQNTRSG---SCPHISSHIKKSPAMLPSPLTRPKAELPMPPTVPQDNGTSAFLARGGRWGGE-----SRRRSWRRDSVTTASSASYATYCKRDRDQGMLGI--GRRPAAVPALPV 434          
BLAST of mRNA_H-elongata_contig13986.2775.1 vs. uniprot
Match: D7G1P3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1P3_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 9.100e-18
Identity = 122/400 (30.50%), Postives = 171/400 (42.75%), Query Frame = 0
Query:    6 RFEVERLKTRRQVVNLLEDAEAIEAATLRAAKTNQSRKDDQNSANAYKEPNGRTRRARGANRVSDVRRDGG-------------ESNAFVEP-QPGEDPNFIGTEKMRFMKYAYKHVDSHKAFERRRNAGTKRADEDRYDELCKQGFPSGVVNLEVTPKYADGSPTLSTTRATSGVGEVQGKHNRG------IWREGEALASPRRCGRRRLLRQKQGILMDLKGVISRQAEALGRLAEGYHDPCGQVANRPGRN---DTINKQRNPGIRGAHYDTDNCRITNK-RTSSNGTRS--------YKGDSRMQNTAKVSRSTAESSNVTSRLRTQPQDNATSTFLSLGGRWGGHMGAGISKRRS--EATSASYATYCNERRRNGDTGYRTG--KRRWAVPLLPI 369
            RF  ER + +  +  L++DA A+EAA L+  +  Q R              G    ++G          GG             +SNA+VE  +P +D  FI  ++MRFMKY Y H+D  KA +    A T+   +   +E      P+                      A++G G  +     G      I + GE   +      R+LL +K+GIL+++KGV+SRQAEAL RL +   +    VA   GR    D  ++Q  P    A   T +   T K   S   TRS           +S     +  +R TA          T P DN TS FL+ GGRWGG    G  +  S   A+SASYATYC   +R+ D G   G  +R  AVP LP+
Sbjct:   49 RFTAERRQDQAHISGLVQDANAVEAALLKEQQPLQGRNSQGRDDPCAAASRGDNASSQGGGDAGGAVNTGGVEGSVGVRRIFSTKSNAYVETAEPKDDSKFISLDQMRFMKYVYSHIDGQKAAK----AHTRLMTDVVREEKQMAARPNAHEQXXXXXXXXXXXXXXKRMFASNGAGSRRAGPVAGSSVPPVISKAGEGGCNSG-SRERQLLERKRGILLEMKGVVSRQAEALDRLVQSSAN--ANVAAENGRRRGGDHNSRQSRPSH--ASVSTSSSLFTPKGEKSGRNTRSGSCPDISGLTNNSPAMLPSSATRPTA----ALPMPPTVPPDNVTSAFLARGGRWGGESRRGSWRCDSVTTASSASYATYC---KRDRDQGRVLGISRRPPAVPALPV 432          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13986.2775.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L4T8_9PHAE5.930e-1930.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1P3_ECTSI9.100e-1830.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13986contigH-elongata_contig13986:332..1731 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13986.2775.1mRNA_H-elongata_contig13986.2775.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13986 332..1731 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13986.2775.1 ID=prot_H-elongata_contig13986.2775.1|Name=mRNA_H-elongata_contig13986.2775.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=373bp
MIQFHRFEVERLKTRRQVVNLLEDAEAIEAATLRAAKTNQSRKDDQNSAN
AYKEPNGRTRRARGANRVSDVRRDGGESNAFVEPQPGEDPNFIGTEKMRF
MKYAYKHVDSHKAFERRRNAGTKRADEDRYDELCKQGFPSGVVNLEVTPK
YADGSPTLSTTRATSGVGEVQGKHNRGIWREGEALASPRRCGRRRLLRQK
QGILMDLKGVISRQAEALGRLAEGYHDPCGQVANRPGRNDTINKQRNPGI
RGAHYDTDNCRITNKRTSSNGTRSYKGDSRMQNTAKVSRSTAESSNVTSR
LRTQPQDNATSTFLSLGGRWGGHMGAGISKRRSEATSASYATYCNERRRN
GDTGYRTGKRRWAVPLLPIGGK*
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