mRNA_H-elongata_contig139763.2766.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig139763.2766.1 vs. uniprot
Match: A0A097IUF9_9PHAE (Malic enzyme n=7 Tax=Sargassum TaxID=3015 RepID=A0A097IUF9_9PHAE) HSP 1 Score: 226 bits (576), Expect = 3.730e-69 Identity = 116/129 (89.92%), Postives = 120/129 (93.02%), Query Frame = 1
Query: 1 LSQEAQVELTVQEMRRKSTLLDKYVFLQSLQDVHSTLYYAVLSRYTYEVMPFVYTPVVGEACQKFSHIYRHTPQARARCGLYLSLQDRGQLRSILDNWPEDDIRAIVFTDGERILGLGDQGIDGMGIPV 387
L+ EAQVELTVQEMRRKST L+KYVFLQSLQDVHSTLYYAVLSR+TYEVMPFVYTPVVGEACQKFS IYRHTPQ GLYLSLQDRGQLRSILDNWP DDIRAIVFTDGERILGLGDQGIDGMGIP+
Sbjct: 58 LTLEAQVELTVQEMRRKSTPLEKYVFLQSLQDVHSTLYYAVLSRHTYEVMPFVYTPVVGEACQKFSQIYRHTPQ-----GLYLSLQDRGQLRSILDNWPVDDIRAIVFTDGERILGLGDQGIDGMGIPI 181
BLAST of mRNA_H-elongata_contig139763.2766.1 vs. uniprot
Match: A0A097IUJ6_9PHAE (Malic enzyme n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A097IUJ6_9PHAE) HSP 1 Score: 216 bits (551), Expect = 1.930e-65 Identity = 108/125 (86.40%), Postives = 115/125 (92.00%), Query Frame = 1
Query: 13 AQVELTVQEMRRKSTLLDKYVFLQSLQDVHSTLYYAVLSRYTYEVMPFVYTPVVGEACQKFSHIYRHTPQARARCGLYLSLQDRGQLRSILDNWPEDDIRAIVFTDGERILGLGDQGIDGMGIPV 387
AQVELT+QE+RRKS+ LDKYVFLQSLQDVHSTLYYAVLSR+T+E MPFVYTPVVGEACQKFS IYRHTPQ GLYLS+ DRGQLRSILDNWP DDIRAIVFTDGERILGLGDQG+DGMGIPV
Sbjct: 63 AQVELTIQELRRKSSALDKYVFLQSLQDVHSTLYYAVLSRHTHECMPFVYTPVVGEACQKFSQIYRHTPQ-----GLYLSMDDRGQLRSILDNWPVDDIRAIVFTDGERILGLGDQGVDGMGIPV 182
BLAST of mRNA_H-elongata_contig139763.2766.1 vs. uniprot
Match: A0A097IUJ3_UNDPI (Malic enzyme n=3 Tax=Laminariales TaxID=2886 RepID=A0A097IUJ3_UNDPI) HSP 1 Score: 211 bits (537), Expect = 2.360e-63 Identity = 107/129 (82.95%), Postives = 116/129 (89.92%), Query Frame = 1
Query: 1 LSQEAQVELTVQEMRRKSTLLDKYVFLQSLQDVHSTLYYAVLSRYTYEVMPFVYTPVVGEACQKFSHIYRHTPQARARCGLYLSLQDRGQLRSILDNWPEDDIRAIVFTDGERILGLGDQGIDGMGIPV 387
L+ E QVELT+QE+RRK + LDKYVFLQSLQDV+STLYYAVLSR+TYE +PFVYTPVVGEACQKFS IYRHTPQ GLYLS+ DRG+LRSILDNWP DDIRAIVFTDGERILGLGDQGIDGMGIPV
Sbjct: 61 LTLEDQVELTMQELRRKGSALDKYVFLQSLQDVNSTLYYAVLSRHTYECLPFVYTPVVGEACQKFSQIYRHTPQ-----GLYLSMDDRGKLRSILDNWPMDDIRAIVFTDGERILGLGDQGIDGMGIPV 184
BLAST of mRNA_H-elongata_contig139763.2766.1 vs. uniprot
Match: D7FW76_ECTSI (Malic enzyme n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW76_ECTSI) HSP 1 Score: 211 bits (536), Expect = 2.450e-63 Identity = 107/129 (82.95%), Postives = 117/129 (90.70%), Query Frame = 1
Query: 1 LSQEAQVELTVQEMRRKSTLLDKYVFLQSLQDVHSTLYYAVLSRYTYEVMPFVYTPVVGEACQKFSHIYRHTPQARARCGLYLSLQDRGQLRSILDNWPEDDIRAIVFTDGERILGLGDQGIDGMGIPV 387
L+ E QVELT+QE+RRK++ LDKYVFLQSLQDV++TLYYAVLSR+TYE MPFVYTPVVGEACQKFS IYRHTPQ GLYLSL DRG+LRSILDNWP +DIRAIVFTDGERILGLGDQGIDGMGIPV
Sbjct: 46 LTLEDQVELTMQELRRKTSALDKYVFLQSLQDVNATLYYAVLSRHTYECMPFVYTPVVGEACQKFSQIYRHTPQ-----GLYLSLNDRGKLRSILDNWPVEDIRAIVFTDGERILGLGDQGIDGMGIPV 169
BLAST of mRNA_H-elongata_contig139763.2766.1 vs. uniprot
Match: A0A097IUJ0_9PHAE (Malic enzyme n=3 Tax=Ectocarpales TaxID=2877 RepID=A0A097IUJ0_9PHAE) HSP 1 Score: 211 bits (536), Expect = 4.890e-63 Identity = 107/129 (82.95%), Postives = 116/129 (89.92%), Query Frame = 1
Query: 1 LSQEAQVELTVQEMRRKSTLLDKYVFLQSLQDVHSTLYYAVLSRYTYEVMPFVYTPVVGEACQKFSHIYRHTPQARARCGLYLSLQDRGQLRSILDNWPEDDIRAIVFTDGERILGLGDQGIDGMGIPV 387
L+ E QVELT+QE+RRKS+ LDKYVFLQSLQDV+STLYYAVLSR+TYE MPFVYTPVVGEACQKFS +YRHTPQ GLYLS+ DRG+LRSILDNWP DIRAIVFTDGERILGLGDQGIDGMGIPV
Sbjct: 81 LTLEDQVELTMQELRRKSSALDKYVFLQSLQDVNSTLYYAVLSRHTYECMPFVYTPVVGEACQKFSQLYRHTPQ-----GLYLSIDDRGKLRSILDNWPVQDIRAIVFTDGERILGLGDQGIDGMGIPV 204
BLAST of mRNA_H-elongata_contig139763.2766.1 vs. uniprot
Match: A0A097IUG2_SCYLO (Malic enzyme n=3 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A097IUG2_SCYLO) HSP 1 Score: 210 bits (534), Expect = 6.550e-63 Identity = 106/129 (82.17%), Postives = 116/129 (89.92%), Query Frame = 1
Query: 1 LSQEAQVELTVQEMRRKSTLLDKYVFLQSLQDVHSTLYYAVLSRYTYEVMPFVYTPVVGEACQKFSHIYRHTPQARARCGLYLSLQDRGQLRSILDNWPEDDIRAIVFTDGERILGLGDQGIDGMGIPV 387
L+ E QVELT+QE RRK + LDKYVFLQSLQDV+STLYYAVLSR+TYE MPFVYTPVVGEACQKFS IYRHTPQ GLYLS++DRG+LRSILDNWP +D+RAIVFTDGERILGLGDQGIDGMGIPV
Sbjct: 61 LTLEDQVELTMQEFRRKCSALDKYVFLQSLQDVNSTLYYAVLSRHTYECMPFVYTPVVGEACQKFSQIYRHTPQ-----GLYLSIEDRGKLRSILDNWPVEDVRAIVFTDGERILGLGDQGIDGMGIPV 184
BLAST of mRNA_H-elongata_contig139763.2766.1 vs. uniprot
Match: A0A097IUH0_9PHAE (Malic enzyme n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A097IUH0_9PHAE) HSP 1 Score: 209 bits (533), Expect = 8.170e-63 Identity = 104/129 (80.62%), Postives = 116/129 (89.92%), Query Frame = 1
Query: 1 LSQEAQVELTVQEMRRKSTLLDKYVFLQSLQDVHSTLYYAVLSRYTYEVMPFVYTPVVGEACQKFSHIYRHTPQARARCGLYLSLQDRGQLRSILDNWPEDDIRAIVFTDGERILGLGDQGIDGMGIPV 387
L+ EAQV++T++E RRKS+ LDKY+FLQSLQD HSTLYYAVLS +T+E MPFVYTPVVGEACQKFS IYRHTPQ GLYLS+ DRG+LRSILDNWP+DDIRAIVFTDGERILGLGDQGIDGMGIPV
Sbjct: 54 LTLEAQVQVTMEEFRRKSSPLDKYIFLQSLQDTHSTLYYAVLSGHTHETMPFVYTPVVGEACQKFSQIYRHTPQ-----GLYLSIDDRGELRSILDNWPQDDIRAIVFTDGERILGLGDQGIDGMGIPV 177
BLAST of mRNA_H-elongata_contig139763.2766.1 vs. uniprot
Match: A0A097IUG8_9PHAE (Malic enzyme n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A097IUG8_9PHAE) HSP 1 Score: 203 bits (516), Expect = 2.690e-60 Identity = 100/126 (79.37%), Postives = 113/126 (89.68%), Query Frame = 1
Query: 10 EAQVELTVQEMRRKSTLLDKYVFLQSLQDVHSTLYYAVLSRYTYEVMPFVYTPVVGEACQKFSHIYRHTPQARARCGLYLSLQDRGQLRSILDNWPEDDIRAIVFTDGERILGLGDQGIDGMGIPV 387
++QV++T+ E RR+S+ LDKYVFLQSLQD HSTLYYAVLSR+T E MPFVYTPVVGEACQKFS IYRHTPQ GLYLS +DRG+LRSILDNWPE+DIRAIVFTDGERILGLGDQG+DGMGIP+
Sbjct: 59 DSQVKMTILEFRRQSSPLDKYVFLQSLQDAHSTLYYAVLSRHTSECMPFVYTPVVGEACQKFSQIYRHTPQ-----GLYLSFEDRGKLRSILDNWPENDIRAIVFTDGERILGLGDQGLDGMGIPI 179
BLAST of mRNA_H-elongata_contig139763.2766.1 vs. uniprot
Match: A0A835YSM6_9STRA (Malic enzyme n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSM6_9STRA) HSP 1 Score: 181 bits (460), Expect = 3.980e-52 Identity = 85/129 (65.89%), Postives = 109/129 (84.50%), Query Frame = 1
Query: 1 LSQEAQVELTVQEMRRKSTLLDKYVFLQSLQDVHSTLYYAVLSRYTYEVMPFVYTPVVGEACQKFSHIYRHTPQARARCGLYLSLQDRGQLRSILDNWPEDDIRAIVFTDGERILGLGDQGIDGMGIPV 387
L+ +AQV L ++++R K++ ++KY++LQSLQD++ TLYYA+L RYTYE MP VYTP VGEACQKFSH+YR TP+ GLY+S++D+G +R +LDNWP DI+AIVFTDGERILGLGDQGIDGMGIPV
Sbjct: 46 LNLDAQVLLAMEQLRLKTSDIEKYIYLQSLQDINETLYYALLGRYTYECMPLVYTPTVGEACQKFSHLYRQTPR-----GLYISIKDKGNVRELLDNWPHKDIKAIVFTDGERILGLGDQGIDGMGIPV 169
BLAST of mRNA_H-elongata_contig139763.2766.1 vs. uniprot
Match: A0A7S2UW90_9STRA (Malic enzyme n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UW90_9STRA) HSP 1 Score: 176 bits (445), Expect = 6.070e-50 Identity = 84/124 (67.74%), Postives = 103/124 (83.06%), Query Frame = 1
Query: 16 QVELTVQEMRRKSTLLDKYVFLQSLQDVHSTLYYAVLSRYTYEVMPFVYTPVVGEACQKFSHIYRHTPQARARCGLYLSLQDRGQLRSILDNWPEDDIRAIVFTDGERILGLGDQGIDGMGIPV 387
QV+ T+++ R K+T ++KY+FLQS+QDV+ TLYYA L R+TYEVMPFVYTPVVG+AC +FSHIYR TP+ GLYL +G+LR ILDNWP D+RAIVFTDGERILGLGDQG+DGMGIP+
Sbjct: 52 QVQRTMEQFRAKATRIEKYIFLQSIQDVNETLYYACLCRHTYEVMPFVYTPVVGQACIEFSHIYRQTPR-----GLYLPYTMKGRLREILDNWPYKDVRAIVFTDGERILGLGDQGVDGMGIPI 170 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig139763.2766.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig139763.2766.1 >prot_H-elongata_contig139763.2766.1 ID=prot_H-elongata_contig139763.2766.1|Name=mRNA_H-elongata_contig139763.2766.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=129bp LSQEAQVELTVQEMRRKSTLLDKYVFLQSLQDVHSTLYYAVLSRYTYEVMback to top mRNA from alignment at H-elongata_contig139763:243..1205- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig139763.2766.1 ID=mRNA_H-elongata_contig139763.2766.1|Name=mRNA_H-elongata_contig139763.2766.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=963bp|location=Sequence derived from alignment at H-elongata_contig139763:243..1205- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig139763:243..1205- >mRNA_H-elongata_contig139763.2766.1 ID=mRNA_H-elongata_contig139763.2766.1|Name=mRNA_H-elongata_contig139763.2766.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=774bp|location=Sequence derived from alignment at H-elongata_contig139763:243..1205- (Himanthalia elongata Himel1 dioecious)back to top |